keyword
https://read.qxmd.com/read/38570877/physiological-versatility-of-anme-1-and-bathyarchaeotoa-8-archaea-evidenced-by-inverse-stable-isotope-labeling
#21
JOURNAL ARTICLE
Xiuran Yin, Guowei Zhou, Mingwei Cai, Tim Richter-Heitmann, Qing-Zeng Zhu, Mara Maeke, Ajinkya C Kulkarni, Rolf Nimzyk, Marcus Elvert, Michael W Friedrich
BACKGROUND: The trophic strategy is one key principle to categorize microbial lifestyles, by broadly classifying microorganisms based on the combination of their preferred carbon sources, electron sources, and electron sinks. Recently, a novel trophic strategy, i.e., chemoorganoautotrophy-the utilization of organic carbon as energy source but inorganic carbon as sole carbon source-has been specifically proposed for anaerobic methane oxidizing archaea (ANME-1) and Bathyarchaeota subgroup 8 (Bathy-8)...
April 3, 2024: Microbiome
https://read.qxmd.com/read/38565196/clinical-and-growth-correlates-of-retinopathy-of-prematurity-in-preterm-infants-with-surgical-necrotizing-enterocolitis-and-intestinal-perforation
#22
JOURNAL ARTICLE
Parvesh Mohan Garg, Robin Riddick, Md Yusuf Ansari, Asha Meilstrup, David Zepponi, Andrea Smith, Niles Mungan, Jeffery Scott Shenberger, William Hillegass, Padma Parvesh Garg
OBJECTIVE: This study aimed to identify the clinical and growth parameters associated with retinopathy of prematurity (ROP) in infants with necrotizing enterocolitis (NEC) and spontaneous intestinal perforation (SIP). METHODS: We conducted a retrospective cohort study that compared clinical data before and after NEC/SIP onset in neonates, categorizing by any ROP and severe ROP (Type 1/2) status. RESULTS: The analysis included one hundred and nine infants (n=109) with surgical necrotizing enterocolitis/SIP...
April 2, 2024: American Journal of Perinatology
https://read.qxmd.com/read/38564525/polish-adaptation-and-validation-of-the-short-inventory-of-problems-sip-2l
#23
JOURNAL ARTICLE
Kamila Morawska, Jan Chodkiewicz
OBJECTIVES: The aim of the research was to present the Polish adaptation and validation of the Short Inventory of Problems (SIP-2L) by Miller et al. (1995). The SIP-2L is a popular selfreport measure used to assess the negative consequences of alcohol use in 5 domains with negative consequences: physical, interpersonal, intrapersonal, social and impulse control. The adapted version of SIP assesses lifetime consequences of using alcohol. METHODS: A total of 256 participants diagnosed with alcohol dependence (71 women and 185 men) completed an assessment battery that included SIP-2L and Polish versions of AUDIT, MAST and KOEP-R, which is a modified Polish adaptation of CEAQ - Comprehensive Effects of Alcohol Questionnaire...
December 31, 2023: Psychiatria Polska
https://read.qxmd.com/read/38561308/comparing-healthcare-needs-in-extremely-low-birth-weight-infants-with-nec-and-spontaneous-intestinal-perforation
#24
JOURNAL ARTICLE
Priyanka V Chugh, Emily Nes, Katherine Culbreath, Gregory Keefe, Erika M Edwards, Kate A Morrow, Danielle Ehret, Roger F Soll, Biren P Modi, Jeffrey D Horbar, Tom Jaksic
BACKGROUND: Necrotizing enterocolitis (NEC) and spontaneous intestinal perforation (SIP) affect 6-8% of extremely low birth weight (ELBW) infants. SIP has lower mortality than NEC, but with similar short-term morbidity in length of stay, growth failure, and supplemental oxygen requirements. Comparative long-term neurodevelopmental outcomes have not been clarified. METHODS: Data were prospectively collected from 59 North American neonatal units, regarding ELBW infants (401-1000 g or 22-27 weeks gestational age) born between 2011 and 2018 and evaluated again at 16-26 months corrected age...
March 16, 2024: Journal of Pediatric Surgery
https://read.qxmd.com/read/38559988/influence-of-pub2-on-the-leveling-effect-of-chip-copper-connection-electroplating-mechanism-and-applications
#25
JOURNAL ARTICLE
Lanfeng Guo, Renlong Liu, Zhaobo He, Shaoping Li, Tong Tan, Changyuan Tao
The copper connectivity technique is essential for achieving electrical interconnection in wafer level packaging (WLP), system in packaging (SiP), and 3D packaging. The essential processing material for copper connectivity is a copper sulfate electroplating solution in which organic additives play a crucial role in the regularity of copper electrodeposition. In this study, electrochemical tests, X-ray diffraction, 3D profiling, and scanning electron microscopy were used to investigate the leveling effect and mechanism of polyquaternary ammonium urea-containing polymer (PUB2) in the process of copper electrodeposition on-chip copper connections...
March 26, 2024: ACS Omega
https://read.qxmd.com/read/38552624/mastigoneme-structure-reveals-insights-into-the-o-linked-glycosylation-code-of-native-hydroxyproline-rich-helices
#26
JOURNAL ARTICLE
Jin Dai, Meisheng Ma, Qingwei Niu, Robyn J Eisert, Xiangli Wang, Poulomi Das, Karl F Lechtreck, Susan K Dutcher, Rui Zhang, Alan Brown
Hydroxyproline-rich glycoproteins (HRGPs) are a ubiquitous class of protein in the extracellular matrices and cell walls of plants and algae, yet little is known of their native structures or interactions. Here, we used electron cryomicroscopy (cryo-EM) to determine the structure of the hydroxyproline-rich mastigoneme, an extracellular filament isolated from the cilia of the alga Chlamydomonas reinhardtii. The structure demonstrates that mastigonemes are formed from two HRGPs (a filament of MST1 wrapped around a single copy of MST3) that both have hyperglycosylated poly(hydroxyproline) helices...
March 22, 2024: Cell
https://read.qxmd.com/read/38543625/nitrogen-application-and-rhizosphere-effect-exert-opposite-effects-on-key-straw-decomposing-microorganisms-in-straw-amended-soil
#27
JOURNAL ARTICLE
Yuanzheng Zhao, Shiyu Wang, Meiling Zhang, Li Zeng, Liyu Zhang, Shuyu Huang, Rong Zhang, Wei Zhou, Chao Ai
Crop residue decomposition is an important part of the carbon cycle in agricultural ecosystems, and microorganisms are widely recognized as key drivers during this process. However, we still know little about how nitrogen (N) input and rhizosphere effects from the next planting season impact key straw-decomposing microbial communities. Here, we combined amplicon sequencing and DNA-Stable Isotope Probing (DNA-SIP) to explore these effects through a time-series wheat pot experiment with four treatments: 13 C-labeled maize straw addition with or without N application (S1N1 and S1N0), and no straw addition with or without N application (S0N1 and S0N0)...
March 13, 2024: Microorganisms
https://read.qxmd.com/read/38543098/senescence-and-sasp-are-potential-therapeutic-targets-for-ischemic-stroke
#28
REVIEW
Blake Ouvrier, Saifudeen Ismael, Gregory Jaye Bix
Aging is a known co-morbidity of ischemic stroke with its risk and severity increasing every year past 55+. While many of the current stroke therapies have shown success in reducing mortality, post-stroke morbidity has not seen the same substantial reduction. Recently, the involvement of cellular senescence and SASP in brain injury and neurological degeneration has been recognized. Ischemic injury causes oxidative stress and mitochondrial damage that induces senescence through the activation of p21 and p16 pathways, ultimately leading to synthesis and release of senescence-associated secretory phenotype (SASP)...
February 28, 2024: Pharmaceuticals
https://read.qxmd.com/read/38540749/high-glucose-promotes-and-aggravates-the-senescence-and-dysfunction-of-vascular-endothelial-cells-in-women-with-hyperglycemia-in-pregnancy
#29
JOURNAL ARTICLE
Lin Zheng, Mingqing Li, Huaping Li
Hyperglycemia in pregnancy (HIP) is linked to fetoplacental endothelial dysfunction, which might be a result of hyperglycemia. Hyperglycemia is associated with cell senescence; however, the role and mechanism of high glucose and cell senescence in HIP endothelial cell failure are largely unknown. Our study discovered that human umbilical vein endothelial cells (HUVECs) obtained from HIP pregnant women exhibit excessive senescence, with significantly elevated expression of senescence markers senescence-associated beta-galactosidase (SA-β-gal), p16, p21, and p53...
March 10, 2024: Biomolecules
https://read.qxmd.com/read/38539890/exploring-beneficial-properties-of-haskap-berry-leaf-compounds-for-gut-health-enhancement
#30
JOURNAL ARTICLE
Szymon Sip, Anna Sip, Piotr Szulc, Marek Selwet, Marcin Żarowski, Bogusław Czerny, Judyta Cielecka-Piontek
This study investigates the potential of formulated systems utilising haskap berry leaf extracts and dextran as carriers, to modulate both antioxidant and enzymatic inhibitory activities and their impact on the growth of specific bacterial strains. The analysis of antioxidant capacity, assessed through ABTS, CUPRAC, DPPH, and FRAP assays, revealed varying but consistently high levels across extracts, with Extract 3 (loganic acid: 2.974 mg/g, chlorogenic acid: 1.125 mg/g, caffeic acid: 0.083 mg/g, rutin: 1.137 mg/g, and quercetin: 1...
March 17, 2024: Antioxidants (Basel, Switzerland)
https://read.qxmd.com/read/38539407/assessment-of-psychotic-risk-in-a-sample-of-children-and-adolescents-with-autism-spectrum-disorder-compared-to-a-group-of-clinical-high-risk-patients-a-preliminary-study
#31
JOURNAL ARTICLE
Valeria Mammarella, Elena Monducci, Alessia Maffucci, Letizia Terenzi, Mauro Ferrara, Carla Sogos
UNLABELLED: 1. BACKGROUND: Autism spectrum disorder and psychotic risk show several overlapping symptoms, so differential diagnosis is often difficult. In addition, there is a high rate of comorbidity between the two conditions, which further complicates the work of clinicians. We evaluated the presence of subthreshold psychotic symptoms and/or defined psychotic risk syndromes in autistic children and adolescents; we compared the prevalence, type, and severity of psychotic risk symptoms with those of a group of non-autistic patients at clinical high risk for psychosis (CHR-P)...
March 21, 2024: Children
https://read.qxmd.com/read/38538479/the-application-of-enhanced-recovery-after-surgery-protocol-after-distal-gastrectomy-for-patients-with-gastric-cancer-a-prospective-randomized-clinical-trial
#32
JOURNAL ARTICLE
Chang In Choi, Jae Kyun Park, Jae Hun Chung, Si Hak Lee, Sun Hwi Hwang, Tae Yong Jeon, Dae-Hwan Kim
BACKGROUND: This study aimed to evaluate the clinical outcomes and efficacy of enhanced recovery after surgery (ERAS) protocol in patients undergoing distal gastrectomy for gastric cancer (GC). METHODS: Patients were randomly assigned to the ERAS group (EG) and the conventional care group (CG) by stratified randomization according to age and sex. The primary endpoint was adjusted postoperative hospital stay, calculated using discharge criteria developed to evaluate recovery...
February 27, 2024: Journal of Gastrointestinal Surgery
https://read.qxmd.com/read/38537595/psychosis-spectrum-symptoms-among-individuals-with-schizophrenia-associated-copy-number-variants-and-evidence-of-cerebellar-correlates-of-symptom-severity
#33
JOURNAL ARTICLE
Esra Sefik, Ryan M Guest, Katrina Aberizk, Roberto Espana, Katrina Goines, Derek M Novacek, Melissa M Murphy, Adam E Goldman-Yassen, Joseph F Cubells, Opal Ousley, Longchuan Li, Sarah Shultz, Elaine F Walker, Jennifer G Mulle
The 3q29 deletion (3q29Del) is a copy number variant (CNV) with one of the highest effect sizes for psychosis-risk (>40-fold). Systematic research offers avenues for elucidating mechanism; however, compared to CNVs like 22q11.2Del, 3q29Del remains understudied. Emerging findings indicate that posterior fossa abnormalities are common among carriers, but their clinical relevance is unclear. We report the first in-depth evaluation of psychotic symptoms in participants with 3q29Del (N=23), using the Structured Interview for Psychosis-Risk Syndromes, and compare this profile to 22q11...
March 21, 2024: Psychiatry Research
https://read.qxmd.com/read/38535692/efficient-and-selective-removal-of-palladium-from-simulated-high-level-liquid-waste-using-a-silica-based-adsorbent-ntaamide-c8-sio-2-p
#34
JOURNAL ARTICLE
Jiaxuan Shi, Junli Wang, Wentao Wang, Xuan Wu, Hui Wang, Jianwei Li
In order to realize the effective separation of palladium from high-level liquid waste (HLLW), a ligand-supported adsorbent (NTAamide(C8)/SiO2 -P) was prepared by the impregnation method in a vacuum. The SiO2 -P carrier was synthesized by in situ polymerization of divinylbenzene and styrene monomers on a macroporous silica skeleton. The NTAamide(C8)/SiO2 -P adsorbent was fabricated by impregnating an NTAamide(C8) ligand into the pore of a SiO2 -P carrier under a vacuum condition. The adsorption performance of NTAamide(C8)/SiO2 -P in nitric acid medium has been systematically studied...
March 20, 2024: Nanomaterials
https://read.qxmd.com/read/38532408/heterogeneity-of-clinical-symptomatology-in-pediatric-patients-at-clinical-high-risk-for-psychosis
#35
JOURNAL ARTICLE
L Sophia Rintell, Devon Carroll, Meghan Wales, Joseph Gonzalez-Heydrich, Eugene D'Angelo
OBJECTIVE: Widespread use of diagnostic tools like the Structured Interview for Prodromal Symptoms (SIPS) has highlighted that youth at Clinical High Risk for Psychosis (CHR-P) present with heterogeneous symptomatology. This pilot study aims to highlight the range of clinical characteristics of CHR-P youth, investigate the role of the non-positive (negative, disorganization, and general) symptoms in risk assessment, and determine if specific profiles are associated with severe symptomatology...
March 26, 2024: BMC Research Notes
https://read.qxmd.com/read/38527721/monitoring-of-copper-adsorption-on-biochar-using-spectral-induced-polarization-method
#36
JOURNAL ARTICLE
Sheng Zhou, Yi-Xin Yang, Jing-Jing Cao, Long-Long Meng, Jun-Nan Cao, Chi Zhang, Shuai Zhang, B Bate
Copper contaminant generated from mining and industrial smelting poses potential risks to human health. Biochar, as a low-energy and cost-effective biomaterial, holds value in Cu remediation. Spectral Induced Polarization (SIP) technique is employed in this study to monitor the Cu remediation processes of by biochar in column experiments. Cation exchange at low Cu2+ concentrations and surface complexation at high Cu2+ concentrations are identified as the major mechanisms for copper retention on biochar. The normalized chargeability (mn ) from SIP signals linearly decreased (R2  = 0...
March 23, 2024: Environmental Research
https://read.qxmd.com/read/38527003/constraining-activity-and-growth-substrate-of-fungal-decomposers-via-assimilation-patterns-of-inorganic-carbon-and-water-into-lipid-biomarkers
#37
JOURNAL ARTICLE
Stanislav Jabinski, Wesley D M Rangel, Marek Kopáček, Veronika Jílková, Jan Jansa, Travis B Meador
Fungi are among the few organisms on the planet that can metabolize recalcitrant carbon (C) but are also known to access recently produced plant photosynthate. Therefore, improved quantification of growth and substrate utilization by different fungal ecotypes will help to define the rates and controls of fungal production, the cycling of soil organic matter, and thus the C storage and CO2 buffering capacity in soil ecosystems. This pure-culture study of fungal isolates combined a dual stable isotope probing (SIP) approach, together with rapid analysis by tandem pyrolysis-gas chromatography-isotope ratio mass spectrometry to determine the patterns of water-derived hydrogen (H) and inorganic C assimilated into lipid biomarkers of heterotrophic fungi as a function of C substrate...
March 25, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38525080/identification-of-bacteria-and-fungi-responsible-for-litter-decomposition-in-desert-steppes-via-combined-dna-stable-isotope-probing
#38
JOURNAL ARTICLE
He Ye, Nare Tu, Zhendan Wu, Shilong He, Yu Zhao, Mei Yue, Mei Hong
INTRODUCTION: Soil microorganisms play crucial roles in determining the fate of litter in desert steppes because their activities constitute a major component of the global carbon (C) cycle. Human activities lead to increased ecosystem nitrogen (N) deposition, which has unpredictable impacts on soil microorganism diversity and functions. Nowadays, it is necessary to further study the succession of these microorganisms in the process of litter decomposition in desert steppe, and explore the effect of N deposition on this process...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38524850/regulation-of-sacha-inchi-protein-on-fecal-metabolism-and-intestinal-microorganisms-in-mice
#39
JOURNAL ARTICLE
Kuan Wu, Wanying Gong, Shiyang Lin, Si Huang, Hongyu Mu, Mingming Wang, Jun Sheng, Cunchao Zhao
INTRODUCTION: With the increasing demand for protein utilization, exploring new protein resources has become a research hotspot. Sacha Inchi Protein (SIP) is a high-quality plant protein extracted from Sacha Inchi meal. This study aimed to investigate the impact of SIP on mouse metabolomics and gut microbiota diversity and explore the underlying pathways responsible for its health benefits. METHODS: In this study, the structural composition of SIP was investigated, and the effects of SIP on fecal metabolomics and intestinal microorganisms in mice were explored by LC-MS metabolomics technology analysis and 16S rRNA gene sequencing...
2024: Frontiers in Nutrition
https://read.qxmd.com/read/38524764/-methylomonadaceae-was-the-active-and-dominant-methanotroph-in-tibet-lake-sediments
#40
JOURNAL ARTICLE
Yongcui Deng, Chulin Liang, Xiaomeng Zhu, Xinshu Zhu, Lei Chen, Hongan Pan, Fan Xun, Ye Tao, Peng Xing
Methane (CH4 ), an important greenhouse gas, significantly impacts the local and global climate. Our study focused on the composition and activity of methanotrophs residing in the lakes on the Tibetan Plateau, a hotspot for climate change research. Based on the field survey, the family Methylomonadaceae had a much higher relative abundance in freshwater lakes than in brackish and saline lakes, accounting for ~92% of total aerobic methanotrophs. Using the microcosm sediment incubation with 13 CH4 followed by high throughput sequencing and metagenomic analysis, we further demonstrated that the family Methylomonadaceae was actively oxidizing CH4 ...
January 2024: ISME Commun
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