keyword
https://read.qxmd.com/read/38578735/complete-plastid-genome-of-iris-orchioides-and-comparative-analysis-with-19-iris-plastomes
#21
JOURNAL ARTICLE
Tae-Young Choi, Soo-Rang Lee
Iris is a cosmopolitan genus comprising approximately 280 species distributed throughout the Northern Hemisphere. Although Iris is the most diverse group in the Iridaceae, the number of taxa is debatable owing to various taxonomic issues. Plastid genomes have been widely used for phylogenetic research in plants; however, only limited number of plastid DNA markers are available for phylogenetic study of the Iris. To understand the genomic features of plastids within the genus, including its structural and genetic variation, we newly sequenced and analyzed the complete plastid genome of I...
2024: PloS One
https://read.qxmd.com/read/38578173/csraxs-negatively-regulate-leaf-size-and-fruiting-ability-through-auxin-glycosylation-in-cucumber
#22
JOURNAL ARTICLE
Jiacai Chen, Liu Liu, Guangxin Chen, Shaoyun Wang, Ye Liu, Zeqin Zhang, Hongfei Li, Liming Wang, Zhaoyang Zhou, Jianyu Zhao, Xiaolan Zhang
Leaves are the main photosynthesis organ that directly determines crop yield and biomass. Dissecting the regulatory mechanism of leaf development is crucial for food security and ecosystem turn-over. Here, we identified the novel function of R2R3-MYB transcription factors CsRAXs in regulating cucumber leaf size and fruiting ability. Csrax5 single mutant exhibited enlarged leaf size and stem diameter, and Csrax1/2/5 triple mutant displayed further enlargement phenotype. Overexpression of CsRAX1 or CsRAX5 gave rise to smaller leaf and thinner stem...
April 5, 2024: Journal of Integrative Plant Biology
https://read.qxmd.com/read/38574618/industrial-produced-lemon-nanovesicles-ameliorate-experimental-colitis-associated-damages-in-rats-via-the-activation-of-anti-inflammatory-and-antioxidant-responses-and-microbiota-modification
#23
JOURNAL ARTICLE
Vincenza Tinnirello, Maria Grazia Zizzo, Alice Conigliaro, Mariangela Tabone, Nima Rabienezhad Ganji, Adele Cicio, Carlo Bressa, Mar Larrosa, Francesca Rappa, Giuseppe Vergilio, Roberta Gasparro, Alessia Gallo, Rosa Maria Serio, Riccardo Alessandro, Stefania Raimondo
Plant-derived nanovesicles (PDNVs) have recently emerged as natural delivery systems of biofunctional compounds toward mammalian cells. Considering their already described composition, anti-inflammatory properties, stability, and low toxicity, PDNVs offer a promising path for developing new preventive strategies for several inflammatory diseases, among which the inflammatory bowel disease (IBD). In this study, we explore the protective effects of industrially produced lemon vesicles (iLNVs) in a rat model of IBD...
April 2, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38573786/engineering-plant-cell-fates-and-functions-for-agriculture-and-industry
#24
REVIEW
Connor Tansley, Nicola J Patron, Sarah Guiziou
Many plant species are grown to enable access to specific organs or tissues, such as seeds, fruits, or stems. In some cases, a value is associated with a molecule that accumulates in a single type of cell. Domestication and subsequent breeding have often increased the yields of these target products by increasing the size, number, and quality of harvested organs and tissues but also via changes to overall plant growth architecture to suit large-scale cultivation. Many of the mutations that underlie these changes have been identified in key regulators of the cellular identity and function...
April 4, 2024: ACS Synthetic Biology
https://read.qxmd.com/read/38570177/exposure-to-acifluorfen-induces-developmental-toxicity-in-the-early-life-stage-of-zebrafish
#25
JOURNAL ARTICLE
Taeyeon Hong, Junho Park, Hahyun Park, Garam An, Hojun Lee, Gwonhwa Song, Whasun Lim
Acifluorfen, a selective herbicide from the diphenyl ether family, targets broad leaf weeds. Diphenyl ether inhibits chlorophyll production in green plants by inhibiting protoporphyrinogen oxidase (PPO), causing cellular damage. Despite its known impacts on plants, the influence of acifluorfen on zebrafish embryo development remains unclear. In this study, we explored the LC50 of acifluorfen in early-stage wild-type zebrafish, determining it to be 54.99 mg/L. Subsequent examinations revealed morphological changes in zebrafish, including reduced body length...
April 1, 2024: Comparative Biochemistry and Physiology. Toxicology & Pharmacology: CBP
https://read.qxmd.com/read/38569966/linking-the-humification-of-organic-amendments-with-size-aggregate-distribution-insights-into-molecular-composition-using-ft-icr-ms
#26
JOURNAL ARTICLE
Ho Gyeong Chae, Andrew J Margenot, Jong-Rok Jeon, Min Sung Kim, Kyoung-Soon Jang, Ho Young Yoon, Pil Joo Kim, Jeonggu Lee
Soil organic matter (SOM) plays a pivotal role in enhancing physical and biological characteristics of soil. Humic substances constitute a substantial proportion of SOM and their increase can improve crop yields and promote agricultural sustainability. While previous research has primarily assessed the influence that humic acids (HAs) derived from natural water have on soil structure, our study focuses on the impact of HAs on soil aggregation under different fertilizer regimes. During the summer cropping season, maize was cultivated under organic and synthetic fertilizer treatments...
April 1, 2024: Science of the Total Environment
https://read.qxmd.com/read/38569955/morphological-variations-and-demographic-responses-of-the-mediterranean-pond-turtle-mauremys-leprosa-to-heterogeneous-aquatic-habitats
#27
JOURNAL ARTICLE
Anne-Sophie Le Gal, Jean-Yves Georges, Christine Sotin, Bruno Charrière, Olivier Verneau
Human activities affect terrestrial and aquatic habitats leading to changes at both individual and population levels in wild animal species. In this study, we investigated the phenotype and demographics of the Mediterranean pond turtle Mauremys leprosa (Schweigger, 1812) in contrasted environments of Southern France: two peri-urban rivers receiving effluents from wastewater treatment plants (WWTP), and another one without sewage treatment plant. Our findings revealed the presence of pesticides and pharmaceuticals in the three rivers of investigation, the highest diversities and concentrations of pollutants being found in the river subsections impacted by WWTP effluents...
April 1, 2024: Science of the Total Environment
https://read.qxmd.com/read/38564422/metal-organic-framework-mediated-delivery-of-nucleic-acid-across-intact-plant-cells
#28
REVIEW
Pei Yu, Xiongjie Zheng, Lukman O Alimi, Salim Al-Babili, Niveen M Khashab
Plant synthetic biology is applied in sustainable agriculture, clean energy, and biopharmaceuticals, addressing crop improvement, pest resistance, and plant-based vaccine production by introducing exogenous genes into plants. This technique faces challenges delivering genes due to plant cell walls and intact cell membranes. Novel approaches are required to address this challenge, such as utilizing nanomaterials known for their efficiency and biocompatibility in gene delivery. This work investigates metal-organic frameworks (MOFs) for gene delivery in intact plant cells by infiltration...
April 2, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38557903/editing-of-slwrky29-by-crispr-activation-promotes-somatic-embryogenesis-in-solanum-lycopersicum-cv-micro-tom
#29
JOURNAL ARTICLE
Eliana Valencia-Lozano, José Luis Cabrera-Ponce, Aarón Barraza, Alberto Cristian López-Calleja, Elsa García-Vázquez, Diana Marcela Rivera-Toro, Stefan de Folter, Raúl Alvarez-Venegas
At present, the development of plants with improved traits like superior quality, high yield, or stress resistance, are highly desirable in agriculture. Accelerated crop improvement, however, must capitalize on revolutionary new plant breeding technologies, like genetically modified and gene-edited crops, to heighten food crop traits. Genome editing still faces ineffective methods for the transformation and regeneration of different plant species and must surpass the genotype dependency of the transformation process...
2024: PloS One
https://read.qxmd.com/read/38556283/topical-nanoemulsion-hydrogel-formulated-from-supercritical-fluid-extracted-palm-pressed-fiber-oil-and-virgin-coconut-oil-with-antioxidant-and-antibacterial-effects
#30
JOURNAL ARTICLE
Siau Hui Mah, Sreeranjini Sundrasegaran, Harrison Lik Nang Lau
Skincare industries are growing rapidly around the globe but most products are formulated using synthetic chemicals and organic solvent extracted plant extracts, thus may be hazardous to the users and incur higher cost for purification that eventually leads to phytonutrient degradation. Therefore, this study aimed to formulate a stable natural formulation with antioxidant and antimicrobial activities by using supercritical carbon dioxide (SC-CO 2 ) extracted palm-pressed fiber oil (PPFO) as an active ingredient with virgin coconut oil (VCO) as a formulation base...
2024: Journal of Oleo Science
https://read.qxmd.com/read/38554518/evidence-of-soil-particle-induced-ecotoxicity-in-old-abandoned-mining-area
#31
JOURNAL ARTICLE
Jin Il Kwak, Dokyung Kim, Youn-Joo An
Ecotoxicity of heavy metals in soil is primarily associated with their bioaccessibility and bioavailability in the soil media. However, in some exceptional cases, soil ecotoxicity has been observed despite high total metal concentrations and low extractable metal concentrations in contaminated field sites; therefore, other exposure pathways must be considered. Therefore, the aim of this study was to evaluate the soil-particle induced ecotoxicity in an old mining area. We hypothesized that heavy metals, strongly adsorbed onto soil particles of consumable size for soil organisms, exhibit ecotoxicity, especially on soil particles ∼1 µm to 300 µm in size...
March 28, 2024: Journal of Hazardous Materials
https://read.qxmd.com/read/38552461/liposomes-as-selenium-nanocarriers-for-foliar-application-to-wheat-plants-a-biofortification-strategy
#32
JOURNAL ARTICLE
Marcia Viltres-Portales, María-Jesús Sánchez-Martín, Roberto Boada, Mercè Llugany, Manuel Valiente
In the present work, liposomes have been used as nanocarriers in the biofortification of wheat plants with selenium (Se) through foliar application. Liposomal formulations were prepared using 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) and Phospholipon®90H (P90H) (average size <100 nm), loaded with different concentrations of inorganic Se (selenite and selenate) and applied twice to the plants in the stage of vegetative growth. Liposomes enhanced Se uptake by wheat plants compared to direct application...
March 24, 2024: Food Chemistry
https://read.qxmd.com/read/38548151/global-discharge-of-microplastics-from-mechanical-recycling-of-plastic-waste
#33
JOURNAL ARTICLE
Go Suzuki, Natsuyo Uchida, Kosuke Tanaka, Osamu Higashi, Yusuke Takahashi, Hidetoshi Kuramochi, Naohisa Yamaguchi, Masahiro Osako
The increasing production of plastic products and generation of plastic waste have had increasingly negative environmental impacts. Although recycling could reduce plastic pollution, microplastics can be generated during the process of crushing plastic products during mechanical recycling. We conducted crushing tests with 13 different plastics and documented the size distribution of particles generated. We then estimated the discharge of microplastics associated with recycling and their removal in wastewater treatment plants...
March 26, 2024: Environmental Pollution
https://read.qxmd.com/read/38545395/chromosome-level-genome-of-thymus-mandschuricus-reveals-molecular-mechanism-of-aroma-compounds-biosynthesis
#34
JOURNAL ARTICLE
Lin Jia, Ning Xu, Bin Xia, Wenjie Gao, Qingran Meng, Qiang Li, Ying Sun, Shoubin Xu, Miao He, Huiyan Gu
BACKGROUND: Thymus mandschuricus is an aromatic and medicinal plant with notable antibacterial and antioxidant properties. However, traditional breeding methods rely on phenotypic selection due to a lack of molecular resources. A high-quality reference genome is crucial for marker-assisted breeding, genome editing, and molecular genetics. RESULTS: We utilized PacBio and Hi-C technologies to generate a high-quality chromosome-level reference genome for T. mandschuricus , with a size of 587...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38543017/machine-learning-based-prediction-of-plant-cuticle-air-partition-coefficients-for-organic-pollutants-revealing-mechanisms-from-a-molecular-structure-perspective
#35
JOURNAL ARTICLE
Tianyun Tao, Cuicui Tao, Tengyi Zhu
Accurately predicting plant cuticle-air partition coefficients ( K ca ) is essential for assessing the ecological risk of organic pollutants and elucidating their partitioning mechanisms. The current work collected 255 measured K ca values from 25 plant species and 106 compounds (dataset (I)) and averaged them to establish a dataset (dataset (II)) containing K ca values for 106 compounds. Machine-learning algorithms (multiple linear regression (MLR), multi-layer perceptron (MLP), k-nearest neighbors (KNN), and gradient-boosting decision tree (GBDT)) were applied to develop eight QSPR models for predicting K ca ...
March 20, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38541241/unravelling-the-antimicrobial-antibiofilm-suppressing-fibronectin-binding-protein-a-fnba-and-cna-virulence-genes-anti-inflammatory-and-antioxidant-potential-of-biosynthesized-solanum-lycopersicum-silver-nanoparticles
#36
JOURNAL ARTICLE
Alsayed E Mekky, Ahmed E M Abdelaziz, Fady Sayed Youssef, Shymaa A Elaskary, Aly A Shoun, Eman A Alwaleed, Mahmoud Ali Gaber, Abdulaziz A Al-Askar, Alhadary M Alsamman, Abdullah Yousef, Gehad AbdElgayed, Reda A Suef, Mohamed A Selim, Ebrahim Saied, Mohamed Khedr
Background and Objectives : Urinary tract infections [UTIs] are considered the third most known risk of infection in human health around the world. There is increasing appreciation for the pathogenicity of Gram-positive and Gram-negative strains in UTIs, aside from fungal infection, as they have numerous virulence factors. Materials and Methods : In this study, fifty urine samples were collected from patients suffering from UTI. Among the isolates of UTI microbes, six isolates were described as MDR isolates after an antibiotic susceptibility test carried out using ten different antibiotics...
March 21, 2024: Medicina
https://read.qxmd.com/read/38529065/seed-shape-and-size-of-silene-latifolia-differences-between-sexes-and-influence-of-the-parental-genome-in-hybrids-with-silene-dioica
#37
JOURNAL ARTICLE
Hubinský Marcel, Martín-Gómez José Javier, Cervantes Emilio, Hobza Roman, Rodríguez Lorenzo Jose Luis
INTRODUCTION: Plants undergo various natural changes that dramatically modify their genomes. One is polyploidization and the second is hybridization. Both are regarded as key factors in plant evolution and result in phenotypic differences in different plant organs. In Silene , we can find both examples in nature, and this genus has a seed shape diversity that has long been recognized as a valuable source of information for infrageneric classification. METHODS: Morphometric analysis is a statistical study of shape and size and their covariations with other variables...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38527575/exploring-the-dietary-and-therapeutic-potential-of-licorice-glycyrrhiza-uralensis-fisch-sprouts
#38
JOURNAL ARTICLE
Yong-Sung Park, Sang-Mo Kang, Yeon-Ji Kim, In-Jung Lee
ETHNOPHARMACOLOGICAL RELEVANCE: This research substantiates the traditional use of Glycyrrhiza uralensis Fisch. for liver health, with scientific evidence of the non-toxic and lipid-lowering properties of licorice sprout extracts. The sprouts' rich mineral and amino acid content, along with their strong antioxidant activity, reinforce their value in traditional medicine. These findings bridge ancient herbal practices with modern science, highlighting licorice's potential in contemporary therapeutic applications...
March 23, 2024: Journal of Ethnopharmacology
https://read.qxmd.com/read/38523139/highly-efficient-catalytic-degradation-of-organic-dyes-using-iron-nanoparticles-synthesized-with-vernonia-amygdalina-leaf-extract
#39
JOURNAL ARTICLE
Yohannes Shuka Jara, Tilahun Tumiso Mekiso, Alemayhu Pawulos Washe
Today, nanoscience explores the potential of nanoparticles due to their extraordinary properties compared to bulk materials. The synthesis of metal nanoparticles using plant extracts is a very promising method for environmental remediation, which gets global attention due to pollution-led global warming. In the present study, iron nanoparticles (FeNPs) were successfully synthesized by the green method using Vernonia amygdalina plant leaf extract as a natural reducing and capping agent. Biosynthesized FeNPs were characterized with different analytical techniques such as UV-visible, FT-IR, XRD, and SEM...
March 24, 2024: Scientific Reports
https://read.qxmd.com/read/38516344/a-global-synthesis-and-conceptualization-of-the-magnitude-and-duration-of-soil-carbon-losses-in-response-to-forest-disturbances
#40
JOURNAL ARTICLE
Mathias Mayer, Andri Baltensweiler, Jason James, Andreas Rigling, Frank Hagedorn
AIM: Forest disturbances are increasing around the globe due to changes in climate and management, deteriorating forests' carbon sink strength. Estimates of global forest carbon budgets account for losses of plant biomass but often neglect the effects of disturbances on soil organic carbon (SOC). Here, we aimed to quantify and conceptualize SOC losses in response to different disturbance agents on a global scale. LOCATION: Global. TIME PERIOD: 1983-2022...
January 2024: Global Ecology and Biogeography: a Journal of Macroecology
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