keyword
https://read.qxmd.com/read/38250621/testing-the-limits-of-multiplex-respiratory-virus-assays-for-sars-cov-2-at-high-cycle-threshold-values-comparative-performance-of-cobas-6800-8800-sars-cov-2-influenza-a-b-xpert-xpress-sars-cov-2-flu-rsv-and-cobas-liat-sars-cov-2-influenza-a-b
#21
JOURNAL ARTICLE
Nancy Matic, Tanya Lawson, Gordon Ritchie, Christopher F Lowe, Marc G Romney
BACKGROUND: Multiplex real-time RT-PCR assays for respiratory pathogens are valuable tools to optimize laboratory workflow and turnaround time. At a time when resurgence of influenza and respiratory syncytial virus (RSV) cases have been widely observed along with continued transmission of SARS-CoV-2, timely identification of all circulating respiratory viruses is crucial. This study evaluates the detection of low viral loads of SARS-CoV-2 by four multiplex molecular assays: Roche cobas 6800/8800 SARS-CoV-2 & Influenza A/B Test, Cepheid Xpert Xpress SARS-CoV-2/Flu/RSV, cobas Liat SARS-CoV-2 & Influenza A/B, and a laboratory-developed test (LDT)...
January 2024: Journal of the Association of Medical Microbiology and Infectious Disease Canada, Journal officiel de l’Association pour la microbiologie médicale et l’infectiologie Canada
https://read.qxmd.com/read/38246542/variation-in-protein-metabolism-biomarkers-during-the-transition-period-and-associations-with-health-colostrum-quality-reproduction-and-milk-production-traits-in-holstein-cows
#22
JOURNAL ARTICLE
N Siachos, V Tsiamadis, G Oikonomou, N Panousis, G Banos, I Sampsonidis, S Kalogiannis, G Arsenos, G E Valergakis
The aims of this study were to assess a) the variation of protein metabolism biomarkers and of factors affecting them during the transition period, b) the association of each biomarker with skeletal muscle reserves and their changes, and c) the association of these biomarkers with postpartum health, colostrum quality, reproduction, and milk production. For this purpose, 238 multiparous Holstein cows from 6 herds were used in a prospective cohort study. Plasma concentrations of 3-methylhistidine (3-MH) and 1-methylhistidine (1-MH) and serum concentrations of total protein (TP), albumin (ALB), urea nitrogen (BUN) and creatinine (SCR) were determined for each cow at -21d; -7d; 7d; 21d and 28d relative to calving...
January 19, 2024: Journal of Dairy Science
https://read.qxmd.com/read/38240016/investigation-of-nonlinear-optical-properties-in-%C3%AE-a-2-bb-o-6-a-li-na-k-b-ti-zr-hf-b-se-te-by-first-principles-calculations
#23
JOURNAL ARTICLE
Gaojing Fang, Xiaojun Teng, Luo Yan, Yu Wu, Kui Xue, Xiaofeng Zhang, Yi-Min Ding, Liujiang Zhou, Qiye Wen
Nonlinear optical (NLO) crystals based on oxides typically have wide bandgaps and large laser damage thresholds (LDTs), which are important for generating high-power and continuous terahertz radiation. Recently, a new family of NLO materials α-A2 BB'O6 including Li2 TiTeO6 (LTTO) with a strong second harmonic generation (SHG) efficiency of 26 × KH2 PO4 (KDP) and a large LDT of 550 MW cm-2 were reported. Herein, we systematically study the electronic structures and NLO properties of α-A2 BB'O6 (A = Li, Na, K; B = Ti, Zr, Hf; B' = Se, Te) to explore the relationship between the structure and SHG coefficient...
January 19, 2024: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/38237912/-expert-consensus-on-clinical-localization-detection-standards-for-metagenomic-next-generation-sequencing-of-pathogens
#24
JOURNAL ARTICLE
(no author information available yet)
Infectious diseases seriously endanger human health. Rapid and accurate detection of pathogens is the key to effective treatment and precise prevention and control of infectious diseases. Traditional pathogen testing techniques cover a limited variety of microorganisms, making it difficult to meet clinical needs. Metagenomic Next Generation Sequencing (mNGS) theoretically can simultaneously detect all known gene sequences of pathogens, greatly improving the clinical capacity of diagnosing and treating patients with severe, complicated, rare, and emerging pathogen infections...
January 17, 2024: Zhonghua Yu Fang Yi Xue za Zhi [Chinese Journal of Preventive Medicine]
https://read.qxmd.com/read/38206042/fda-s-proposed-rule-for-the-regulation-of-laboratory-developed-tests
#25
JOURNAL ARTICLE
Melissa B Miller, Mary Lee Watts, Linoj Samuel
In October 2023, the Food and Drug Administration (FDA) released a proposed rule that ends enforcement discretion for laboratory-developed tests (LDTs). The FDA's proposal outlines a five-stage implementation to begin regulating LDTs as they do for commercial in vitro diagnostics (IVDs), including modified FDA-approved/cleared tests. We outline here concerns from the clinical and public health microbiology laboratory perspective. It is our opinion that LDTs performed by individual Clinical Laboratory Improvement Amendments-certified diagnostic laboratories should not be regulated in the same way as commercial IVDs...
January 11, 2024: Journal of Clinical Microbiology
https://read.qxmd.com/read/38201639/imaging-delay-following-liver-directed-therapy-increases-progression-risk-in-early-to-intermediate-stage-hepatocellular-carcinoma
#26
JOURNAL ARTICLE
Jordin Stanneart, Kelley G Nunez, Tyler Sandow, Juan Gimenez, Daniel Fort, Mina Hibino, Ari J Cohen, Paul T Thevenot
Hepatocellular carcinoma (HCC) remains one of the leading causes of cancer-related deaths in the world. Patients with early-stage HCC are treated with liver-directed therapies to bridge or downstage for liver transplantation (LT). In this study, the impact of HCC care delay on HCC progression among early-stage patients was investigated. Early-stage HCC patients undergoing their first cycle of liver-directed therapy (LDT) for bridge/downstaging to LT between 04/2016 and 04/2022 were retrospectively analyzed...
January 2, 2024: Cancers
https://read.qxmd.com/read/38168499/subregion-and-sex-differences-in-ethanol-activation-of-cholinergic-and-glutamatergic-cells-in-the-mesopontine-tegmentum
#27
JOURNAL ARTICLE
S M Mulloy, E M Aback, R Gao, S Engel, K Pawaskar, C Win, A Moua, L Hillukka, A M Lee
Ethanol engages cholinergic signaling and elicits endogenous acetylcholine release. Acetylcholine input to the midbrain originates from the mesopontine tegmentum (MPT), which is composed of the laterodorsal tegmentum (LDT) and the pedunculopontine tegmental nucleus (PPN). We investigated the effect of acute and chronic ethanol administration on cholinergic and glutamatergic neuron activation in the PPN and LDT in male and female mice. We show that ethanol activates neurons of the PPN and not the LDT in male mice...
January 2, 2024: Scientific Reports
https://read.qxmd.com/read/38137910/effects-of-low-dye-tape-on-arch-height-and-its-impact-on-the-medial-gastrocnemius-electromyographic-activity-in-structurally-differentiable-foot-types-a-cross-sectional-observational-study
#28
JOURNAL ARTICLE
Carlos Martínez-Sebastián, Laura Ramos-Petersen, María Gámez-Guijarro, Raquel Alabau-Dasi, George Banwell, Almudena Núñez-Fernández, Rubén Sánchez-Gómez, Álvaro Gómez-Carrión
BACKGROUND: Low-Dye tape (LDT) is a short-term treatment for plantar fasciitis, where external stabilization by means of the tape improves kinetics, kinematics, pain level, and electromyography (EMG). PURPOSE: The purpose of this study was to compare the EMG of the medial gastrocnemius (MG) and changes in arch height (AH) based on the type of foot. METHODS: A total of 30 subjects participated in this study; they walked on a treadmill barefoot and when taped, where the average activity and changes in AH were measured over a 30 s period...
December 8, 2023: Life
https://read.qxmd.com/read/38137715/liver-directed-therapy-in-neuroendocrine-neoplasms-metastatic-to-both-liver-and-bone
#29
JOURNAL ARTICLE
Kristen E Limbach, Kelly M Mahuron, Aaron T Scott, Philip H G Ituarte, Gagandeep Singh
Bone metastases from gastroenteropancreatic neuroendocrine neoplasms (GEPNENs) have been associated with poor prognosis, but it is unclear whether patients with concurrent bone metastases who receive liver-directed therapy (LDT) would derive survival benefit. The California Cancer Registry dataset, merged with data from the California Office of Statewide Health Planning and Development, was used to perform a retrospective study of GEPNENs metastatic to both liver and bone between 2000 and 2012. A total of 203 patients were identified...
December 13, 2023: Journal of Clinical Medicine
https://read.qxmd.com/read/38137484/analytic-validation-of-optical-genome-mapping-in-hematological-malignancies
#30
JOURNAL ARTICLE
Andy W C Pang, Karena Kosco, Nikhil S Sahajpal, Arthi Sridhar, Jen Hauenstein, Benjamin Clifford, Joey Estabrook, Alex D Chitsazan, Trilochan Sahoo, Anwar Iqbal, Ravindra Kolhe, Gordana Raca, Alex R Hastie, Alka Chaubey
Structural variations (SVs) play a key role in the pathogenicity of hematological malignancies. Standard-of-care (SOC) methods such as karyotyping and fluorescence in situ hybridization (FISH), which have been employed globally for the past three decades, have significant limitations in terms of resolution and the number of recurrent aberrations that can be simultaneously assessed, respectively. Next-generation sequencing (NGS)-based technologies are now widely used to detect clinically significant sequence variants but are limited in their ability to accurately detect SVs...
December 9, 2023: Biomedicines
https://read.qxmd.com/read/38130458/multidrug-resistance-in-haemonchus-contortus-in-sheep-can-it-be-overcome
#31
JOURNAL ARTICLE
Michal Babják, Alžbeta Königová, Michaela Komáromyová, Tetiana Kuzmina, Pawel Nosal, Marián Várady
INTRODUCTION: Gastrointestinal nematodes pose a threat to animal health and affect farmers by negatively impacting farm management. MATERIAL AND METHODS: The study was conducted on a sheep farm with suspected reductions in the efficacies of anthelmintics. Efficacy was determined using in vivo faecal egg count reduction, in vitro egg hatch (EHT) and larval development (LDT) tests. In the first phase, 60 sheep were equally split into six groups. Group 1 received the recommended dose of albendazole (ALB), group 2 received the same after fasting for 24 h, group 3 received the dose divided into two halves at 6 h intervals, group 4 received a double dose of ALB, and group 5 received the recommended dose of ivermectin (IVM)...
December 2023: Journal of Veterinary Research
https://read.qxmd.com/read/38100020/liver-directed-therapy-for-neuroendocrine-tumor-metastases-in-the-era-of-peptide-receptor-radionuclide-therapy
#32
REVIEW
Rana Rabei, Nicholas Fidelman
The treatment of neuroendocrine neoplasm (NEN) liver metastases involves a multidisciplinary approach that includes liver-directed therapies (LDT) and systemic treatments, such as peptide receptor radionuclide therapy (PRRT). LDT has demonstrated efficacy in rapidly reducing tumor bulk, improving symptoms, and delaying disease progression. Interventional radiologists should be consulted prior to switching therapy for patients with progressive or symptomatic neuroendocrine tumor liver metastases. Long-term follow-up data on the safety of Yttrium-90 radioembolization before and after PRRT remain limited...
December 15, 2023: Current Treatment Options in Oncology
https://read.qxmd.com/read/38081255/a-new-high-pressure-high-temperature-deformation-apparatus-to-study-the-brittle-to-ductile-transition-in-rocks
#33
JOURNAL ARTICLE
G G Meyer, M Acosta, H Leclere, L Morier, M Teuscher, G Garrison, A Schubnel, M Violay
Understanding the micro-mechanisms underlying the localized-ductile transition (LDT) as well as the brittle-plastic transition (BPT) has become crucial for our wider understanding of crustal processes and seismicity. Given how difficult in situ observations of these transitions are to perform, laboratory experiments might be our only way to investigate the processes active under these conditions (high T and high P). Here, we present Triaxial AppaRatus for GEoThermal energy, a new gas-based triaxial apparatus located at EPFL in Switzerland that was specifically designed to operate under conditions where both the LDT and BPT can occur in geomaterials...
April 1, 2023: Review of Scientific Instruments
https://read.qxmd.com/read/38058281/expanded-molecular-detection-of-mpl-codon-p-w515-and-p-s505n-mutations-in-myeloproliferative-neoplasms
#34
JOURNAL ARTICLE
Eric W Miller, Celeste M Lamberson, Ratilal R Akabari, Michel R Nasr, Steven M Sperber
BACKGROUND: Patients negative for the JAK2 p.V617F somatic variant are frequently reflexed to testing for MPL exon 10 variants. Detection of these variants via multiplexed allele-specific PCR followed by fragment analysis has been previously published. The present study builds on this concept by improving the detection of the p.W515A variant, adding a second allele-specific primer to detect the p.W515R variant, and incorporating an improved primer for p.S505N detection. METHODS: The W515 amplification employs 5'-labeled allele-specific forward primers to detect p...
December 7, 2023: Journal of Clinical Laboratory Analysis
https://read.qxmd.com/read/38057676/driving-factors-and-clustering-analysis-of-expressway-vehicular-co-2-emissions-in-guizhou-province-china
#35
JOURNAL ARTICLE
Jingxu Chen, Qiru Cao, Xiuyu Shen, Xinlian Yu, Xize Liu, Hongyu Mao
Expressways are essential for intercounty trips of passenger travel and freight mobility, which are also an important source of vehicular CO2 emissions in transportation sector. This study takes the expressway system of Guizhou Province as the research objective, and establishes the multi-year expressway vehicular CO2 emission inventories at the county level from 2011 to 2019. We employ the extended STIRPAT model incorporating ridge regression to identify driving factors from six different aspects, and then utilize the affinity propagation cluster method to conduct the differentiation research by dividing Guizhou's counties into four clusters...
December 7, 2023: Environmental Science and Pollution Research International
https://read.qxmd.com/read/38047988/design-synthesis-and-cellular-imaging-application-of-a-fluorescent-probe-based-on-fluoride-ion-induced-cyclization-of-phenothiazine-derivatives
#36
JOURNAL ARTICLE
Tingting Feng, Jiaxue Yang, San Tu, Ting Yang, Ting Wu, Wenqiang Zhu, Yi Le, Li Liu
Fluoride is both necessary and potentially harmful in excessive amounts, making its detection crucial. Fluorescent probes provide a sensitive and selective means for this purpose. In this study, we developed and synthesized a fluorescent probe for LDT using phenothiazine derivatives and aryl vinyl nitrile. Initially non-fluorescent, the probe undergoes a Si-O bond breakage in the presence of fluoride ions, resulting in the formation of a larger conjugated system and subsequent fluorescence emission. The probe exhibits superior selectivity and sensitivity towards fluoride ions, with a detection limit of 0...
December 4, 2023: Journal of Fluorescence
https://read.qxmd.com/read/38043796/clostridioides-difficile-canonical-l-d-transpeptidases-catalyse-a-novel-type-of-peptidoglycan-cross-links-and-are-not-required-for-beta-lactam-resistance
#37
JOURNAL ARTICLE
Nicola F Galley, Darren Greetham, Marcel G Alamán-Zárate, Mike P Williamson, Caroline A Evans, William D Spittal, Jessica E Buddle, Jane Freeman, Georgina L Davis, Mark J Dickman, Mark H Wilcox, Andrew L Lovering, Robert P Fagan, Stéphane Mesnage
Clostridioides difficile is the leading cause of antibiotic-associated diarrhoea worldwide with significant morbidity and mortality. This organism is naturally resistant to several beta-lactam antibiotics that inhibit the polymerisation of peptidoglycan, an essential component of the bacteria cell envelope. Previous work has revealed that C. difficile peptidoglycan has an unusual composition. It mostly contains 3-3 cross-links, catalysed by enzymes called L,D-transpeptidases (Ldts) that are poorly inhibited by beta-lactams...
December 1, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/38014248/subregion-and-sex-differences-in-ethanol-activation-of-cholinergic-and-glutamatergic-cells-in-the-mesopontine-tegmentum
#38
S M Mulloy, E M Aback, R Gao, S Engel, K Pawaskar, C Win, A Moua, L Hillukka, A M Lee
Ethanol engages cholinergic signaling and elicits endogenous acetylcholine release. Acetylcholine input to the midbrain originates from the mesopontine tegmentum (MPT), which is composed of the laterodorsal tegmentum (LDT) and the pedunculopontine tegmental nucleus (PPN). We investigated the effect of acute and chronic ethanol administration on cholinergic and glutamatergic neuron activation in the PPN and LDT in male and female mice. We show that ethanol selectively activates neurons of the PPN and not the LDT in male mice...
November 13, 2023: bioRxiv
https://read.qxmd.com/read/37975146/hypoglycemia-and-anxiolysis-mediated-by-levofloxacin-treatment-in-diabetic-rats
#39
JOURNAL ARTICLE
Poonam Singh, Vaibhav Walia, Prabhakar Kumar Verma
PURPOSE: The present study was designed to determine the effect of levofloxacin (LVX) treatment on the blood glucose level, insulin sensitivity, anxiety level, nitrite and MDA level of STZ induced diabetic rats. METHODS: Wistar rats were used in the present study. The rats were made diabetic by the administration of single dose of STZ (45 mg/kg, i.p.) and NAD (50 mg/kg, i.p.). The rats with the blood glucose level greater than 200 mg/dl were considered as diabetic (confirmed at day-3 of STZ-NAD administration)...
December 2023: Journal of Diabetes and Metabolic Disorders
https://read.qxmd.com/read/37966626/evaluation-of-the-fully-automated-sample-to-result-seegene-starlet-aios-platform-for-detection-of-sars-cov-2-influenza-virus-a-influenza-virus-b-and-rsv
#40
JOURNAL ARTICLE
C W E Brouwer, A Russcher, Y Rezek, R H T Nijhuis
Early, accurate, and bulk detection of respiratory pathogens is essential for patient management and infection control. STARlet-All-in-One System (AIOS) (Seegene) is a new, fully automated, sample-to-result, molecular diagnostic platform. This study describes the first evaluation of STARlet-AIOS, by testing the Allplex™ SARS-CoV-2 (AS) and Allplex™ SARS-CoV-2/FluA/FluB/RSV combination (AC) assays in comparison to the SARS-CoV-2 assays used at our institute. Over a 3-week period, all naso-/oropharyngeal specimens tested for SARS-CoV-2 using either GeneXpert, Panther, or in-house developed test (LDT) were tested on the AIOS using the AS or AC assays...
January 2024: European Journal of Clinical Microbiology & Infectious Diseases
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