keyword
https://read.qxmd.com/read/38674014/gut-bacteria-provide-genetic-and-molecular-reporter-systems-to-identify-specific-diseases
#21
REVIEW
Leon M T Dicks
With genetic information gained from next-generation sequencing (NGS) and genome-wide association studies (GWAS), it is now possible to select for genes that encode reporter molecules that may be used to detect abnormalities such as alcohol-related liver disease (ARLD), cancer, cognitive impairment, multiple sclerosis (MS), diabesity, and ischemic stroke (IS). This, however, requires a thorough understanding of the gut-brain axis (GBA), the effect diets have on the selection of gut microbiota, conditions that influence the expression of microbial genes, and human physiology...
April 17, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38673787/berberine-effects-in-pre-fibrotic-stages-of-non-alcoholic-fatty-liver-disease-clinical-and-pre-clinical-overview-and-systematic-review-of-the-literature
#22
REVIEW
Florentina Ionita-Radu, Cristina Patoni, Andreea Simona Nancoff, Flavius-Stefan Marin, Laura Gaman, Ana Bucurica, Calin Socol, Mariana Jinga, Madalina Dutu, Sandica Bucurica
Non-alcoholic fatty liver disease (NAFLD) is the predominant cause of chronic liver conditions, and its progression is marked by evolution to non-alcoholic steatosis, steatohepatitis, cirrhosis related to non-alcoholic steatohepatitis, and the potential occurrence of hepatocellular carcinoma. In our systematic review, we searched two databases, Medline (via Pubmed Central) and Scopus, from inception to 5 February 2024, and included 73 types of research (nine clinical studies and 64 pre-clinical studies) from 2854 published papers...
April 10, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38672520/catalytic-synthesis-of-s-chbe-by-directional-coupling-and-immobilization-of-carbonyl-reductase-and-glucose-dehydrogenase
#23
JOURNAL ARTICLE
Yadong Wang, Ruiqi Sun, Peng Chen, Fenghuan Wang
Ethyl (S)-4-chloro-3-hydroxybutyrate ((S)-CHBE) is an important chiral intermediate in the synthesis of the cholesterol-lowering drug atorvastatin. Studying the use of SpyTag/SpyCatcher and SnoopTag/SnoopCatcher systems for the asymmetric reduction reaction and directed coupling coenzyme regeneration is practical for efficiently synthesizing (S)-CHBE. In this study, Spy and Snoop systems were used to construct a double-enzyme directed fixation system of carbonyl reductase (BsCR) and glucose dehydrogenase (BsGDH) for converting 4-chloroacetoacetate (COBE) to (S)-CHBE and achieving coenzyme regeneration...
April 21, 2024: Biomolecules
https://read.qxmd.com/read/38672466/biosynthesis-of-c4-c8-3-hydroxycarboxylic-acids-from-glucose-through-the-inverted-fatty-acid-%C3%AE-oxidation-by-metabolically-engineered-escherichia-coli
#24
JOURNAL ARTICLE
Andrey Yu Gulevich, Alexandra Yu Skorokhodova, Vladimir G Debabov
Inverted fatty acid β-oxidation represents a versatile biochemical platform for biosynthesis by the engineered microbial strains of numerous value-added chemicals from convenient and abundant renewable carbon sources, including biomass-derived sugars. Although, in recent years, significant progress has been made in the production through this pathway of n-alcohols, 1,3-diols, and carboxylic acids and its 2,3-unsaturated derivatives, the potential of the pathway for the biosynthesis of 3-hydroxycarboxylic acids remained almost undisclosed...
April 7, 2024: Biomolecules
https://read.qxmd.com/read/38671927/impact-of-adherence-to-the-mediterranean-diet-on-antioxidant-status-and-metabolic-parameters-in-nafld-patients-a-24-month-lifestyle-intervention-study
#25
JOURNAL ARTICLE
Maria Magdalena Quetglas-Llabrés, Margalida Monserrat-Mesquida, Cristina Bouzas, Silvia García, Emma Argelich, Miguel Casares, Lucía Ugarriza, Isabel Llompart, Josep A Tur, Antoni Sureda
BACKGROUND: The Mediterranean Diet (MedDiet) is recognized as a healthy dietary pattern. Non-alcoholic fatty liver disease (NAFLD) is characterized by the excessive accumulation of fat in the liver. OBJECTIVES: To assess the antioxidant status in erythrocytes, plasma, and peripheral blood mononuclear cells (PBMCs) of NAFLD patients following a 24-month lifestyle intervention based on the MedDiet. Adult patients ( n = 40; aged 40-60 years) diagnosed with NAFLD by magnetic resonance imaging were divided into two groups based on their adherence to the MedDiet...
April 17, 2024: Antioxidants (Basel, Switzerland)
https://read.qxmd.com/read/38671792/tuning-mechanical-characteristics-and-permeability-of-alginate-hydrogel-by-polyvinyl-alcohol-and-deep-eutectic-solvent-addition
#26
JOURNAL ARTICLE
Tadej Menegatti, Tilen Kopač, Polona Žnidaršič-Plazl
Alginate-based hydrogels are widely utilized for various applications, including enzyme immobilization and the development of drug delivery systems, owing to their advantageous characteristics, such as low toxicity, high availability and cost-effectiveness. However, the broad applicability of alginate hydrogels is hindered by their limited mechanical and chemical stability, as well as their poor permeability to hydrophobic molecules. In this study, we addressed the mechanical properties and chemical resistance of alginate hydrogels in a high-pKa environment by the copolymerization of alginate with polyvinyl alcohol (PVA)...
April 12, 2024: Bioengineering
https://read.qxmd.com/read/38668386/identification-and-functional-characterization-of-alternative-transcripts-of-lncrna-hnf1a-as1-and-their-impacts-on-cell-growth-differentiation-liver-diseases-and-in-response-to-drug-induction
#27
JOURNAL ARTICLE
Jing Jin, Le Tra Giang Nguyen, Andrew Wassef, Ragui Sadek, Timothy M Schmitt, Grace L Guo, Theodore P Rasmussen, Xiao-Bo Zhong
The long non-coding RNA (lncRNA) hepatocyte nuclear factor-1 alpha (HNF1A) antisense RNA 1 (HNF1A-AS1) is an important lncRNA for liver growth, development, cell differentiation, and drug metabolism. Like many lncRNAs, HNF1A-AS1 has multiple annotated alternative transcripts in the human genome. Several fundamental biological questions are still not solved: (1) How many transcripts really exist in biological samples, such as liver samples and liver cell lines? (2) What are the expression patterns of different alternative HNF1A-AS1 transcripts at different conditions, including during cell growth and development, after exposure to xenobiotics (such as drugs), and in disease conditions, such as metabolic dysfunction-associated steatotic liver disease (MASLD), alcohol-associated liver disease (ALD) cirrhosis, and obesity? (3) Does the siRNA used in previous studies knock down one or multiple transcripts? (4) Do different transcripts have the same or different functions for gene regulation? The presented data confirm the existence of several annotated HNF1A-AS1 transcripts in liver samples and cell lines, but also identify some new transcripts, which are not annotated in the Ensembl genome database...
April 21, 2024: Non-Coding RNA
https://read.qxmd.com/read/38668352/cryoprotectant-mediated-cold-stress-mitigation-in-litchi-flower-development-transcriptomic-and-metabolomic-perspectives
#28
JOURNAL ARTICLE
Xue-Wen Zheng, Xin-Yue Cao, Wen-Hao Jiang, Guang-Zhao Xu, Qing-Zhi Liang, Zhuan-Ying Yang
Temperature is vital in plant growth and agricultural fruit production. Litchi chinensis Sonn, commonly known as litchi, is appreciated for its delicious fruit and fragrant blossoms and is susceptible to stress when exposed to low temperatures. This study investigates the effect of two cryoprotectants that counteract cold stress during litchi flowering, identifies the genes that generate the cold resistance induced by the treatments, and hypothesizes the roles of these genes in cold resistance. Whole plants were treated with Bihu and Liangli cryoprotectant solutions to protect inflorescences below 10 °C...
April 15, 2024: Metabolites
https://read.qxmd.com/read/38668331/grape-blueberry-anthocyanins-and-their-gut-derived-metabolites-attenuate-lps-nigericin-induced-inflammasome-activation-by-inhibiting-asc-speck-formation-in-thp-1-monocytes
#29
JOURNAL ARTICLE
Inken Behrendt, Isabella Röder, Frank Will, Gabriela Michel, Elvira Friedrich, Daniela Grote, Zoe Martin, Hanna Pauline Dötzer, Mathias Fasshauer, Martin Speckmann, Sabine Kuntz
Inflammasomes are multi-protein complexes, which are formed in response to tissue injury, infections, and metabolic stress. However, aberrant inflammasome activation has been linked to several inflammatory diseases. Anthocyanins have been reported to attenuate NLR family pyrin domain-containing 3 (NLRP3) inflammasome activation, but the influence of grape/blueberry anthocyanins and especially their gut-derived metabolites on NLRP3 inflammasome activation in human monocytes remains unclear. Therefore, human leukemic monocytes (THP-1 cells, Tohoku Hospital Pediatrics-1 cells) were preincubated with different concentrations of grape/blueberry anthocyanins, homovanillyl alcohol, or 2,4,6-trihydroxybenzaldehyde (THBA) before the NLRP3 inflammasome was activated by lipopolysaccharide and/or nigericin...
April 3, 2024: Metabolites
https://read.qxmd.com/read/38667805/characterization-of-three-polysaccharide-based-hydrogels-derived-from-laminaria-japonica-and-their-hemostatic-properties
#30
JOURNAL ARTICLE
Yang Chen, Jinying Shi, Huamai Qiu, Lijun You, Panqi Xu, Rui Rao, Minqian Wu, Ruohan Jia
Three Laminaria japonica polysaccharides (LJPs) extracted via water extraction (LJP-W), acid extraction (LJP-A), and enzymatic extraction (LJP-E) were used as raw materials to be cross-linked with chitosan and polyvinyl alcohol to prepare hydrogels. Compared with conventional hydrogel systems, all three types of LJP-based polysaccharide hydrogels exhibited better swelling properties (14 times their original weight) and the absorption ability of simulated body fluid (first 2 h: 6-10%). They also demonstrated better rigidity and mechanical strength...
April 20, 2024: Marine Drugs
https://read.qxmd.com/read/38665634/bioturbation-analysis-of-microbial-communities-and-flavor-metabolism-in-a-high-yielding-cellulase-bacillus-subtilis-biofortified-daqu
#31
JOURNAL ARTICLE
Yanbo Liu, Haideng Li, Wenxi Liu, Kejin Ren, Xuehan Li, Zhenke Zhang, Runna Huang, Suna Han, Jianguang Hou, Chunmei Pan
In this study, a fortified Daqu (FF Daqu) was prepared using high cellulase-producing Bacillus subtilis , and the effects of in situ fortification on the physicochemical properties, flavor, active microbial community and metabolism of Daqu were analyzed. The saccharification power, liquefaction power, and cellulase activity of the FF Daqu were significantly increased compared with that of the traditional Daqu (CT Daqu). The overall differences in flavor components and their contents were not significant, but the higher alcohols were lower in FF Daqu...
June 30, 2024: Food chemistry: X
https://read.qxmd.com/read/38665627/free-and-bound-phenolic-profiles-of-radix-puerariae-thomsonii-from-different-growing-regions-and-their-bioactivities
#32
JOURNAL ARTICLE
Weixin Li, Mingwei Zhang, Xuchao Jia, Min Zhang, Yanxia Chen, Lihong Dong, Fei Huang, Qin Ma, Dong Zhao, Ruifen Zhang
The free and bound phenolic profiles and their bioactivities of radix puerariae thomsonii (RPT) cultivars from 7 growing regions in China were investigated. Total phenolic and flavonoid contents were from 148.71 to 435.32 mg gallic acid equivalents /100 g dry weight and 561.93 to 826.11 mg catechin equivalents /100 g dry weight, respectively, with 20.64-38.28% and 32.77-47.29% contribution from bound fractions. Sixteen phenolic compounds were detected in RPTs. Bound fractions contributed 28...
June 30, 2024: Food chemistry: X
https://read.qxmd.com/read/38664334/essential-phospholipids-impact-cytokine-secretion-and-alter-lipid-metabolizing-enzymes-in-human-hepatocyte-cell-lines
#33
JOURNAL ARTICLE
Dominik Wupperfeld, Gert Fricker, Béatrice Bois De Fer, Branko Popovic
BACKGROUND: Essential phospholipids (EPL) are hepatoprotective. METHODS: The effects on interleukin (IL)-6 and -8 secretion and on certain lipid-metabolizing enzymes of non-cytotoxic concentrations of EPL (0.1 and 0.25 mg/ml), polyenylphosphatidylcholine (PPC), and phosphatidylinositol (PtdIns) (both at 0.1 and 1 mg/ml), compared with untreated controls, were assessed in human hepatocyte cell lines (HepG2, HepaRG, and steatotic HepaRG). RESULTS: Lipopolysaccharide (LPS)-induced IL-6 secretion was significantly decreased in HepaRG cells by most phospholipids, and significantly increased in steatotic HepaRG cells with at least one concentration of EPL and PtdIns...
April 26, 2024: Pharmacological Reports: PR
https://read.qxmd.com/read/38664226/pancreatic-diseases-genetics-and-modeling-using-human-pluripotent-stem-cells
#34
JOURNAL ARTICLE
Yuri Lee, Kihyun Lee
Pancreas serves endocrine and exocrine functions in the body; thus, their pathology can cause a broad range of irreparable consequences. Endocrine functions include the production of hormones such as insulin and glucagon, while exocrine functions involve the secretion of digestive enzymes. Disruption of these functions can lead to conditions like diabetes mellitus and exocrine pancreatic insufficiency. Also, the symptoms and causality of pancreatic cancer very greatly depends on their origin: pancreatic ductal adenocarcinoma is one of the most fatal cancer; however, most of tumor derived from endocrine part of pancreas are benign...
April 26, 2024: International Journal of Stem Cells
https://read.qxmd.com/read/38663832/non-alcoholic-fatty-liver-disease-changes-the-expression-and-activity-of-hepatic-drug-metabolizing-enzymes-and-transporters-in-rats
#35
JOURNAL ARTICLE
Yifei Shen, Jie Liu, Bingyi Yao, Yuanjin Zhang, Shengbo Huang, Chenmeizi Liang, Junze Huang, Yu Tang, Xin Wang
Non-alcoholic fatty liver disease (NAFLD) is one of the most common liver diseases, which can cause serious complications and gradually increase the mortality rate. However, the effects of NAFLD on drug-metabolizing enzymes and transporters remain unclear, which may cause some confusion regarding patient medication. In this study, a NAFLD rat model was constructed by feeding rats with methionine and choline deficiency diets for 6 weeks, and the mRNA and protein levels of drug-metabolizing enzymes and transporter were analyzed by real-time fluorescent quantitative PCR and Western blot, respectively...
April 23, 2024: Toxicology Letters
https://read.qxmd.com/read/38663513/impact-of-flaxseed-supplementation-on-lipid-profile-and-liver-enzymes-in-patients-with-non-alcoholic-fatty-liver-disease-systematic-review-and-meta-analysis-of-randomized-controlled-trials
#36
REVIEW
Dyari H Ahmed, Hawal Lateef Fateh
Since the effects of flaxseed supplementation on lipid profile and liver enzymes are still controversial, a meta-analysis of randomized controlled trials was conducted in the present study to assess the effect of flaxseed supplementation on lipid profile and liver enzymes. The study was designed, conducted, and reported according to the guidelines of the 2020 preferred reporting items for systematic reviews and meta-analysis (PRISMA) statement. A systematic and comprehensive search was performed in several databases from inception up to January 10, 2024...
April 23, 2024: Prostaglandins & Other Lipid Mediators
https://read.qxmd.com/read/38663104/the-effects-of-atractylodes-macrocephala-extract-bzep-self-microemulsion-based-on-gut-liver-axis-hdl-lps-signaling-pathway-to-ameliorate-metabolic-dysfunction-associated-fatty-liver-disease-in-rats
#37
JOURNAL ARTICLE
Bo Li, Xiao-Feng Jiang, Ying-Jie Dong, Yi-Piao Zhang, Xing-Li-Shang He, Cheng-Liang Zhou, Yan-Yan Ding, Ning Wang, Yi-Bin Wang, Wan-Qi Cheng, Ning-Hua Jiang, Jie Su, Gui-Yuan Lv, Su-Hong Chen
OBJECTIVES: To elucidate the therapeutic effects and mechanisms of Atractylodes macrocephala extract crystallize (BZEP) and BZEP self-microemulsion (BZEPWR) on metabolic dysfunction-associated fatty liver disease (MAFLD) induced by "high sugar, high fat, and excessive alcohol consumption" based on the gut-liver axis HDL/LPS signaling pathway. METHODS: In this study, BZEP and BZEPWR were obtained via isolation, purification, and microemulsification. Furthermore, an anthropomorphic MAFLD rat model of "high sugar, high fat, and excessive alcohol consumption" was established...
April 24, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38663066/a-sensitive-immunosensor-via-pd-au-0-85-pd-0-15-in-situ-electrocatalysis-generating-h-2-o-2-for-quenching-electrochemiluminescence-of-ir-pbi-2-acac-ti-3-c-2-t-x-mxene-pva
#38
JOURNAL ARTICLE
Xiang Ren, Zuoxun Xie, Xiaojian Li, Dan Wu, Huan Wang, Yuyang Li, Xueying Wang, Jinxiu Zhao, Qin Wei
The establishment of rapid target analysis methods for cytokeratin fragment antigen 21-1 (CYFRA 21-1) is urgently needed. [Ir(pbi)2 (acac)] (pbi = 2-(4-bromophenyl)-1-hydrogen -benzimidazole, acac = acetylacetonate) as traditional electrochemiluminescence (ECL) luminophores has been confined due to its non-negligible dark toxicity and poor water solubility leading to poor biocompatibility and electrical conductivity as an organic molecule. Hence, to overcome this limitation, [Ir(pbi)2 (acac)] can be effectively loaded on the polyvinyl alcohol hydrogel modified Ti3 C2 Tx MXene surface (Ir@Ti3 C2 Tx -PVA) as sensing platform which can emit high ECL signals...
April 24, 2024: Talanta
https://read.qxmd.com/read/38662778/increased-hepatoprotective-effects-of-the-novel-farnesoid-x-receptor-agonist-int-787-versus-obeticholic-acid-in-a-mouse-model-of-nonalcoholic-steatohepatitis
#39
JOURNAL ARTICLE
Luciano Adorini, Kristoffer Rigbolt, Michael Feigh, Jonathan Roth, Mary Erickson
The nuclear farnesoid X receptor (FXR), a master regulator of bile acid and metabolic homeostasis, is a key target for treatment of nonalcoholic steatohepatitis (NASH). This study compared efficacy of FXR agonists obeticholic acid (OCA) and INT-787 by liver histopathology, plasma biomarkers of liver damage, and hepatic gene expression profiles in the Amylin liver NASH (AMLN) diet-induced and biopsy-confirmed Lepob/ob mouse model of NASH. Lepob/ob mice were fed the AMLN diet for 12 weeks before liver biopsy and subsequent treatment with vehicle, OCA, or INT-787 for 8 weeks...
2024: PloS One
https://read.qxmd.com/read/38661293/genome-mining-of-a-fungal-polyketide-synthase-nonribosomal-peptide-synthetase-hybrid-megasynthetase-pathway-to-synthesize-a-phytotoxic-n-acyl-amino-acid
#40
JOURNAL ARTICLE
Lin Chen, Xin Wang, Yi Zou, Man-Cheng Tang
Guided by the retrobiosynthesis hypothesis, we characterized a fungal polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) hybrid megasynthetase pathway to generate 2- trans -4- trans -2-methylsorbyl-d-leucine ( 1 ), a polyketide amino acid conjugate that inhibits Arabidopsis root growth. The biosynthesis of 1 includes a PKS-NRPS enzyme to assemble an N -acyl amino alcohol intermediate, which is further oxidized to an N -acyl amino acid (NAAA), demonstrating a new biosynthetic logic for synthesizing NAAAs and expanding the chemical space of products encoded by fungal PKS-NRPS clusters...
April 25, 2024: Organic Letters
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