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GWAS potato

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https://www.readbyqxmd.com/read/27898814/software-for-genome-wide-association-studies-in-autopolyploids-and-its-application-to-potato
#1
Umesh R Rosyara, Walter S De Jong, David S Douches, Jeffrey B Endelman
Genome-wide association studies (GWAS) are widely used in diploid species to study complex traits in diversity and breeding populations, but GWAS software tailored to autopolyploids is lacking. The objectives of this research were to (i) develop an R package for autopolyploids based on the + mixed model, (ii) validate the software with simulated data, and (iii) analyze a diversity panel of tetraploid potatoes. A unique feature of the R package, called GWASpoly, is its ability to model different types of polyploid gene action, including additive, simplex dominant, and duplex dominant...
July 2016: Plant Genome
https://www.readbyqxmd.com/read/27281327/targeted-and-untargeted-approaches-unravel-novel-candidate-genes-and-diagnostic-snps-for-quantitative-resistance-of-the-potato-solanum-tuberosum-l-to-phytophthora-infestans-causing-the-late-blight-disease
#2
Teresa Mosquera, Maria Fernanda Alvarez, José M Jiménez-Gómez, Meki Shehabu Muktar, Maria João Paulo, Sebastian Steinemann, Jinquan Li, Astrid Draffehn, Andrea Hofmann, Jens Lübeck, Josef Strahwald, Eckhard Tacke, Hans-Reinhardt Hofferbert, Birgit Walkemeier, Christiane Gebhardt
The oomycete Phytophthora infestans causes late blight of potato, which can completely destroy the crop. Therefore, for the past 160 years, late blight has been the most important potato disease worldwide. The identification of cultivars with high and durable field resistance to P. infestans is an objective of most potato breeding programs. This type of resistance is polygenic and therefore quantitative. Its evaluation requires multi-year and location trials. Furthermore, quantitative resistance to late blight correlates with late plant maturity, a negative agricultural trait...
2016: PloS One
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