keyword
https://read.qxmd.com/read/38242266/the-jmjd-family-of-histone-demethylase-and-their-intimate-links-to-cardiovascular-disease
#1
JOURNAL ARTICLE
Jiarun Xie, Haoyu Lin, Anna Zuo, Junqiao Shao, Wei Sun, Shaoting Wang, Jianda Song, Wang Yao, Yanyu Luo, Jia Sun, Ming Wang
The incidence rate and mortality rate of cardiovascular disease rank first in the world. It is associated with various high-risk factors, and there is no single cause. Epigenetic modifications, such as DNA methylation or histone modification, actively participate in the initiation and development of cardiovascular diseases. Histone lysine methylation is a type of histone post-translational modification. The human Jumonji C domain (JMJD) protein family consists of more than 30 members. JMJD proteins participate in many key nuclear processes and play a key role in the specific regulation of gene expression, DNA damage and repair, and DNA replication...
January 17, 2024: Cellular Signalling
https://read.qxmd.com/read/37708887/a-sex-specific-switch-in-a-single-glial-cell-patterns-the-apical-extracellular-matrix
#2
JOURNAL ARTICLE
Wendy Fung, Taralyn M Tan, Irina Kolotuev, Maxwell G Heiman
Apical extracellular matrix (aECM) constitutes the interface between every tissue and the outside world. It is patterned into diverse tissue-specific structures through unknown mechanisms. Here, we show that a male-specific genetic switch in a single C. elegans glial cell patterns the overlying aECM from a solid sheet to an ∼200 nm pore, thus allowing a male sensory neuron to access the environment. Using cell-specific genetic sex reversal, we find that this switch reflects an inherent sex difference in the glial cell that is independent of the sex identity of the surrounding neurons...
September 8, 2023: Current Biology: CB
https://read.qxmd.com/read/37415067/critical-roles-of-protein-arginine-methylation-in-the-central-nervous-system
#3
REVIEW
Kewei Chang, Dan Gao, Jidong Yan, Liyan Lin, Tingting Cui, Shemin Lu
A remarkable post-transitional modification of both histones and non-histone proteins is arginine methylation. Methylation of arginine residues is crucial for a wide range of cellular process, including signal transduction, DNA repair, gene expression, mRNA splicing, and protein interaction. Arginine methylation is modulated by arginine methyltransferases and demethylases, like protein arginine methyltransferase (PRMTs) and Jumonji C (JmjC) domain containing (JMJD) proteins...
July 6, 2023: Molecular Neurobiology
https://read.qxmd.com/read/37066795/jmjd4-facilitates-pkm2-degradation-in-cardiomyocytes-and-is-protective-against-dilated-cardiomyopathy
#4
JOURNAL ARTICLE
Yansong Tang, Mengying Feng, Yang Su, Teng Ma, Hongjie Zhang, Hongchun Wu, Xiaoyu Wang, Shuyue Shi, Ying Zhang, Yawei Xu, Shijun Hu, Ke Wei, Dachun Xu
BACKGROUND: A large portion of idiopathic and familial dilated cardiomyopathy (DCM) cases have no obvious causal genetic variant. Although altered response to metabolic stress has been implicated, the molecular mechanisms underlying the pathogenesis of DCM remain elusive. The JMJD family proteins, initially identified as histone deacetylases, have been shown to be involved in many cardiovascular diseases. Despite their increasingly diverse functions, whether JMJD family members play a role in DCM remains unclear...
May 30, 2023: Circulation
https://read.qxmd.com/read/36993293/a-sex-specific-switch-in-a-single-glial-cell-patterns-the-apical-extracellular-matrix
#5
Wendy Fung, Taralyn M Tan, Irina Kolotuev, Maxwell G Heiman
Apical extracellular matrix (aECM) constitutes the interface between every tissue and the outside world. It is patterned into diverse tissue-specific structures through unknown mechanisms. Here, we show that a male-specific genetic switch in a single C. elegans glial cell patterns the aECM into a ∼200 nm pore, allowing a male sensory neuron to access the environment. We find that this glial sex difference is controlled by factors shared with neurons ( mab-3, lep-2, lep-5 ) as well as previously unidentified regulators whose effects may be glia-specific ( nfya-1, bed-3, jmjd-3...
March 18, 2023: bioRxiv
https://read.qxmd.com/read/36792181/ccl17-blockade-by-ccl17mab-gsk-j4-ameliorates-hyperalgesia-in-a-rat-model-of-postoperative-pain
#6
JOURNAL ARTICLE
Zhiyu Zhang, Tian Zhang, Yijia Zhang, Yingxia Liang
CCL17 (C-C motif chemokine ligand 17), an important chemokine, plays a vital role in regulating immune balance in the central nervous system. In this study, we explored the potential roles of CCL17 in a rat postoperative pain model and that of blocking CCL17 in the prevention of postoperative pain in rats. A right plantar incision in rat was used as a model of postoperative pain. A behavioral change was measured preoperatively and postoperatively using mechanical withdrawal thresholds and thermal withdrawal latency...
February 15, 2023: Biological & Pharmaceutical Bulletin
https://read.qxmd.com/read/36613903/jmjd8-functions-as-a-novel-akt1-lysine-demethylase
#7
JOURNAL ARTICLE
Yujuan Wang, Yaoyao Zhang, Zehua Li, Junfeng Wang
JMJD8 is a protein from the JMJD family that only has the JmjC domain. Studies on the function of JMJD8 indicate that JMJD8 is involved in signaling pathways, including AKT/NF-κB, and thus affects cell proliferation and development. Here, we reported the activity of JMJD8 as a non-histone demethylase. We investigated the demethylation of JMJD8 on trimethylated lysine of AKT1 in vivo and in vitro using trimethylated AKT1 short peptide and AKT1 protein, and we tracked the regulation of JMJD8 on AKT1 activity at the cellular level...
December 27, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36403753/metabolic-substrates-histone-modifications-and-heart-failure
#8
JOURNAL ARTICLE
Zihang Huang, Shuai Song, Xiaokai Zhang, Linqi Zeng, Aijun Sun, Junbo Ge
Histone epigenetic modifications are chemical modification changes to histone amino acid residues that modulate gene expression without altering the DNA sequence. As both the phenotypic and causal factors, cardiac metabolism disorder exacerbates mitochondrial ATP generation deficiency, thus promoting pathological cardiac hypertrophy. Moreover, several concomitant metabolic substrates also promote the expression of hypertrophy-responsive genes via regulating histone modifications as substrates or enzyme-modifiers, indicating their dual roles as metabolic and epigenetic regulators...
November 17, 2022: Biochimica et Biophysica Acta. Gene Regulatory Mechanisms
https://read.qxmd.com/read/36073756/lysosome-targeted-cyclometalated-iridium-iii-complexes-jmjd-inhibition-dual-induction-of-apoptosis-and-autophagy
#9
JOURNAL ARTICLE
Jun-Jian Lu, Xiu-Rong Ma, Kai Xie, Mei-Ru Chen, Bo Huang, Rong-Tao Li, Rui-Rong Ye
A series of cyclometalated iridium(III) complexes with the formula [Ir(C^N)2 L](PF6) (C^N = 2-phenylpyridine (ppy, in Ir-1), 2-(2-thienyl)pyridine (thpy, in Ir-2), 2-(2,4-difluorophenyl)pyridine (dfppy, in Ir-3), L = 2-(1H-imidazo[4,5-f][1,10]phenanthrolin-2-yl)quinolin-8-ol) were designed and synthesized, which utilize 8-hydroxyquinoline derivative as N^N ligands to chelate the cofactor Fe2+ of the Jumonji domain-containing protein (JMJD) histone demethylase. As expected, the results of UV/Vis titration analysis confirm the chelating capabilities of Ir-1-3 for Fe2+, and molecular docking studies also show that Ir-1-3 can interact with the active pocket of JMJD protein, and treatment of cells with Ir-1-3 results in significant upregulation of trimethylated histone 3 lysine 9 (H3K9Me3), indicating the inhibition of JMJD activity...
September 8, 2022: Metallomics: Integrated Biometal Science
https://read.qxmd.com/read/36050314/jmjd-family-proteins-in-cancer-and-inflammation
#10
REVIEW
Wang Manni, Xue Jianxin, Hong Weiqi, Chen Siyuan, Shi Huashan
The occurrence of cancer entails a series of genetic mutations that favor uncontrollable tumor growth. It is believed that various factors collectively contribute to cancer, and there is no one single explanation for tumorigenesis. Epigenetic changes such as the dysregulation of enzymes modifying DNA or histones are actively involved in oncogenesis and inflammatory response. The methylation of lysine residues on histone proteins represents a class of post-translational modifications. The human Jumonji C domain-containing (JMJD) protein family consists of more than 30 members...
September 1, 2022: Signal Transduction and Targeted Therapy
https://read.qxmd.com/read/36040403/8-hydroxyquinoline-modified-ruthenium-ii-polypyridyl-complexes-for-jmjd-inhibition-and-photodynamic-antitumor-therapy
#11
JOURNAL ARTICLE
Xiurong Ma, Junjian Lu, Peixin Yang, Zheng Zhang, Bo Huang, Rongtao Li, Ruirong Ye
As an ideal scaffold for metal ion chelation, 8-hydroxyquinoline (8HQ) can chelate different metal ions, such as Fe2+ , Cu2+ , Zn2+ , etc. Here, by integrating 8HQ with a ruthenium(II) polypyridyl moiety, two Ru(II)-8HQ complexes (Ru1 and Ru2), [Ru(N-N)2 L](PF6 )2 (L = 2-(1 H -imidazo[4,5- f ][1,10]phenanthrolin-2-yl)quinolin-8-ol; N-N: 2,2'-bipyridine (bpy, in Ru1), 1,10-phenanthroline (phen, in Ru2)) were designed and synthesized. In both complexes, ligand L is an 8HQ derivative designed to chelate the cofactor Fe2+ of jumonji C domain-containing demethylase (JMJD)...
August 30, 2022: Dalton Transactions: An International Journal of Inorganic Chemistry
https://read.qxmd.com/read/35558079/the-jmjd-family-histone-demethylases-in-crosstalk-between-inflammation-and-cancer
#12
REVIEW
Jia Yang, Yuan Hu, Binjing Zhang, Xiao Liang, Xin Li
Inflammation has emerged as a key player in regulating cancer initiation, progression, and therapeutics, acting as a double edged sword either facilitating cancer progression and therapeutic resistance or inducing anti-tumor immune responses. Accumulating evidence has linked the epigenetic modifications of histones to inflammation and cancer, and histone modifications-based strategies have shown promising therapeutic potentials against cancer. The jumonji C domain-containing (JMJD) family histone demethylases have exhibited multiple regulator functions in inflammatory processes and cancer development, and a number of therapeutic strategies targeting JMJD histone demethylases to modulate inflammatory cells and their products have been successfully evaluated in clinical or preclinical tumor models...
2022: Frontiers in Immunology
https://read.qxmd.com/read/34818537/coordinated-maintenance-of-h3k36-k27-methylation-by-histone-demethylases-preserves-germ-cell-identity-and-immortality
#13
JOURNAL ARTICLE
Nico Zaghet, Katrine Madsen, Federico Rossi, Daniel Fernandez Perez, Pier Giorgio Amendola, Samuel Demharter, Ulrich Pfisterer, Konstantin Khodosevich, Diego Pasini, Anna Elisabetta Salcini
Germ cells have evolved unique mechanisms to ensure the transmission of genetically and nongenetically encoded information, whose alteration compromises germ cell immortality. Chromatin factors play fundamental roles in these mechanisms. H3K36 and H3K27 methyltransferases shape and propagate a pattern of histone methylation essential for C. elegans germ cell maintenance, but the role of respective histone demethylases remains unexplored. Here, we show that jmjd-5 regulates H3K36me2 and H3K27me3 levels, preserves germline immortality, and protects germ cell identity by controlling gene expression...
November 23, 2021: Cell Reports
https://read.qxmd.com/read/34678252/identification-of-in-vitro-jmjd-lysine-demethylase-candidate-substrates-via-systematic-determination-of-substrate-preference
#14
JOURNAL ARTICLE
Matthew Hoekstra, Kyle K Biggar
A major regulatory influence over gene expression is the dynamic post translational methylation of histone proteins, with major implications from both lysine methylation and demethylation. The KDM5/JARID1 sub-family of Fe(II)/2-oxoglutarate dependent lysine-specific demethylases is, in part, responsible for the removal of tri/dimethyl modifications from lysine 4 of histone H3 (i.e., H3K4me3/2), a mark associated with active gene expression. Although the relevance of KDM5 activity to disease progression has been primarily established through its ability to regulate gene expression via histone methylation, there is evidence that these enzymes may also target non-histone proteins...
November 15, 2021: Analytical Biochemistry
https://read.qxmd.com/read/34237635/discovery-of-a-potent-and-selective-inhibitor-of-histone-lysine-demethylase-kdm4d
#15
JOURNAL ARTICLE
Zhen Fang, Yang Liu, Rong Zhang, Qiang Chen, Tianqi Wang, Wei Yang, Yan Fan, Chundong Yu, Rong Xiang, Shengyong Yang
Histone lysine demethylase 4D (KDM4D) plays an important role in the regulation of tumorigenesis, progression and drug resistance and has been considered a potential target for cancer treatment. However, there is still a lack of potent and selective KDM4D inhibitors. In this investigation, we report a new class of KDM4D inhibitors containing the 2-(aryl(pyrrolidine-1-yl)methyl)phenol scaffold, identified through AlphaLisa-based screening, structural optimization, and structure-activity relationship analyses...
November 5, 2021: European Journal of Medicinal Chemistry
https://read.qxmd.com/read/33766022/h3k27-modifiers-regulate-lifespan-in-c-elegans-in-a-context-dependent-manner
#16
JOURNAL ARTICLE
Abigail R R Guillermo, Karolina Chocian, Gavriil Gavriilidis, Julien Vandamme, Anna Elisabetta Salcini, Jane Mellor, Alison Woollard
BACKGROUND: Evidence of global heterochromatin decay and aberrant gene expression in models of physiological and premature ageing have long supported the "heterochromatin loss theory of ageing", which proposes that ageing is aetiologically linked to, and accompanied by, a progressive, generalised loss of repressive epigenetic signatures. However, the remarkable plasticity of chromatin conformation suggests that the re-establishment of such marks could potentially revert the transcriptomic architecture of animal cells to a "younger" state, promoting longevity and healthspan...
March 25, 2021: BMC Biology
https://read.qxmd.com/read/33718883/the-transcriptional-coactivator-cbp-p300-is-an-evolutionarily-conserved-node-that-promotes-longevity-in-response-to-mitochondrial-stress
#17
JOURNAL ARTICLE
Terytty Yang Li, Maroun Bou Sleiman, Hao Li, Arwen W Gao, Adrienne Mottis, Alexis Maximilien Bachmann, Gaby El Alam, Xiaoxu Li, Ludger J E Goeminne, Kristina Schoonjans, Johan Auwerx
Organisms respond to mitochondrial stress by activating multiple defense pathways including the mitochondrial unfolded protein response (UPRmt ). However, how UPRmt regulators are orchestrated to transcriptionally activate stress responses remains largely unknown. Here we identified CBP-1, the worm ortholog of the mammalian acetyltransferases CBP/p300, as an essential regulator of the UPRmt , as well as mitochondrial stress-induced immune response, reduction of amyloid-β aggregation and lifespan extension in Caenorhabditis elegans ...
February 2021: Nature aging
https://read.qxmd.com/read/33674745/psph-promotes-melanoma-growth-and-metastasis-by-metabolic-deregulation-mediated-transcriptional-activation-of-nr4a1
#18
JOURNAL ARTICLE
Vipin Rawat, Parmanand Malvi, Deborah Della Manna, Eddy S Yang, Suresh Bugide, Xuchen Zhang, Romi Gupta, Narendra Wajapeyee
Metabolic deregulation, a hallmark of cancer, fuels cancer cell growth and metastasis. Here, we show that phosphoserine phosphatase (PSPH), an enzyme of the serine metabolism pathway, is upregulated in patient-derived melanoma samples. PSPH knockdown using short hairpin RNAs (shRNAs) blocks melanoma tumor growth and metastasis in both cell culture and mice. To elucidate the mechanism underlying PSPH action, we evaluated PSPH shRNA-expressing melanoma cells using global metabolomics and targeted mRNA expression profiling...
March 5, 2021: Oncogene
https://read.qxmd.com/read/33174020/cooperation-between-ets-transcription-factor-etv1-and-histone-demethylase-jmjd1a-in-colorectal-cancer
#19
JOURNAL ARTICLE
Sangphil Oh, Hoogeun Song, Willard M Freeman, Sook Shin, Ralf Janknecht
ETS variant 1 (ETV1) is an oncogenic transcription factor. However, its role in colorectal cancer has remained understudied. The present study demonstrated that ETV1 downregulation led to reduced HCT116 colorectal cancer cell growth and clonogenic activity. Furthermore, the ETV1 mRNA levels were enhanced in colorectal tumors and were associated with disease severity. In addition, ETV1 directly bound to Jumonji C domain‑containing (JMJD) 1A, a histone demethylase known to promote colon cancer. ETV1 and JMJD1A, but not a catalytically inactive mutant thereof, cooperated in inducing the matrix metalloproteinase (MMP)1 gene promoter that was similar to the cooperation between ETV1 and another histone demethylase, JMJD2A...
December 2020: International Journal of Oncology
https://read.qxmd.com/read/32605929/crucial-functions-of-the-jmjd1-kdm3-epigenetic-regulators-in-cancer
#20
REVIEW
Yuan Sui, Ruicai Gu, Ralf Janknecht
Epigenetic changes are one underlying cause for cancer development and often due to dysregulation of enzymes modifying DNA or histones. Most Jumonji C domain-containing (JMJD) proteins are histone lysine demethylases (KDM) and therefore epigenetic regulators. One JMJD subfamily consists of JMJD1A/KDM3A, JMJD1B/KDM3B, and JMJD1C/KDM3C that are roughly 50% identical at the amino acid level. All three JMJD1 proteins are capable of removing dimethyl and monomethyl marks from lysine 9 on histone H3 and might also demethylate histone H4 on arginine 3 and nonhistone proteins...
January 2021: Molecular Cancer Research: MCR
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