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https://www.readbyqxmd.com/read/29895733/-alu-minating-the-path-of-atherosclerosis-progression-chaos-theory-suggests-a-role-for-alu-repeats-in-the-development-of-atherosclerotic-vascular-disease
#1
REVIEW
Miguel Hueso, Josep M Cruzado, Joan Torras, Estanislao Navarro
Atherosclerosis (ATH) and coronary artery disease (CAD) are chronic inflammatory diseases with an important genetic background; they derive from the cumulative effect of multiple common risk alleles, most of which are located in genomic noncoding regions. These complex diseases behave as nonlinear dynamical systems that show a high dependence on their initial conditions; thus, long-term predictions of disease progression are unreliable. One likely possibility is that the nonlinear nature of ATH could be dependent on nonlinear correlations in the structure of the human genome...
June 12, 2018: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/29881905/lncrna-anril-expression-and-anril-gene-polymorphisms-contribute-to-the-risk-of-ischemic-stroke-in-the-chinese-han-population
#2
Jialei Yang, Lian Gu, Xiaojing Guo, Jiao Huang, Zhaoxia Chen, Guifeng Huang, Yiwen Kang, Xiaoting Zhang, Jianxiong Long, Li Su
The aim of the present study was to explore the role of lncRNA ANRIL in the pathogenesis of ischemic stroke (IS) and coronary artery disease (CAD) and to determine the association between ANRIL variants and the genetic susceptibility of IS and CAD in the Chinese Han population. A genetic association study including 550 IS patients, 550 CAD patients, and 550 healthy controls was conducted. The expression levels of lncRNA ANRIL, CDKN2A, and CDKN2B were detected using qRT-PCR. Genotyping was performed by Sequenom MassARRAY on an Agena platform...
June 7, 2018: Cellular and Molecular Neurobiology
https://www.readbyqxmd.com/read/29868613/roles-of-the-chr-9p21-3-anril-locus-in-regulating-inflammation-and-implications-for-anti-inflammatory-drug-target-identification
#3
Ghazal Aarabi, Tanja Zeller, Guido Heydecke, Matthias Munz, Arne Schäfer, Udo Seedorf
Periodontitis (PD) is a common gingival infectious disease caused by an over-aggressive inflammatory reaction to dysbiosis of the oral microbiome. The disease induces a profound systemic inflammatory host response, that triggers endothelial dysfunction and pro-thrombosis and thus may aggravate atherosclerotic vascular disease and its clinical complications. Recently, a risk haplotype at the ANRIL / CDKN2B-AS1 locus on chromosome 9p21.3, that is not only associated with coronary artery disease / myocardial infarction (CAD/MI) but also with PD, could be identified by genome-wide association studies...
2018: Frontiers in Cardiovascular Medicine
https://www.readbyqxmd.com/read/29850016/the-rs13388259-intergenic-polymorphism-in-the-genomic-context-of-the-bcyrn1-gene-is-associated-with-parkinson-s-disease-in-the-hungarian-population
#4
Sándor Márki, Anikó Göblös, Eszter Szlávicz, Nóra Török, Péter Balicza, Benjamin Bereznai, Annamária Takáts, József Engelhardt, Péter Klivényi, László Vécsei, Mária Judit Molnár, Nikoletta Nagy, Márta Széll
Parkinson's disease (PD) is a common neurodegenerative disorder characterized by bradykinesia, resting tremor, and muscle rigidity. To date, approximately 50 genes have been implicated in PD pathogenesis, including both Mendelian genes with rare mutations and low-penetrance genes with common polymorphisms. Previous studies of low-penetrance genes focused on protein-coding genes, and less attention was given to long noncoding RNAs (lncRNAs). In this study, we aimed to investigate the susceptibility roles of lncRNA gene polymorphisms in the development of PD...
2018: Parkinson's Disease
https://www.readbyqxmd.com/read/29802154/association-between-long-non-coding-rna-polymorphisms-and-cancer-risk-a-meta-analysis
#5
Xin Huang, Weiyue Zhang, Zengwu Shao
Several studies have suggested that long non-coding RNA (lncRNA) gene polymorphisms are associated with cancer risk. In the present study, we conducted a meta-analysis related to studies on the association between lncRNA single-nucleotide polymorphisms (SNPs) and the overall risk of cancer. A total 12 SNPs in five common lncRNA genes were finally included in the meta-analysis. In the lncRNA antisense noncoding RNA in the INK4 locus (ANRIL), the rs1333048 A/C, rs4977574 A/G, and rs10757278 A/G polymorphisms, but not rs1333045 C/T, were correlated with overall cancer risk...
May 25, 2018: Bioscience Reports
https://www.readbyqxmd.com/read/29773352/the-anril-genetic-variants-and-their-interactions-with-environmental-risk-factors-on-atherothrombotic-stroke-in-a-han-chinese-population
#6
Li Xiong, Wei Liu, Li Gao, Qiwen Mu, Xindong Liu, Yuhuan Feng, Zhi Tang, Huanyu Tang, Hua Liu
BACKGROUND: Ischemic stroke (IS) is considered to be a heterogeneous, multifactorial disease with a strong genetic background. This study aims to determine whether variants in the antisense noncoding RNA in the INK4 locus (ANRIL) gene are associated with IS in Han Chinese, as well as whether there is evidence of a gene-environment interactions. MATERIALS AND METHODS: A case-controlled association study was conducted in which only patients with atherothrombotic stroke (ATS) were enrolled...
May 14, 2018: Journal of Stroke and Cerebrovascular Diseases: the Official Journal of National Stroke Association
https://www.readbyqxmd.com/read/29772549/long-non-coding-rna-and-polycomb-an-intricate-partnership-in-cancer-biology
#7
Cyrinne Achour, Francesca Aguilo
High-throughput analyses have revealed that the vast majority of the transcriptome does not code for proteins. These non-translated transcripts, when larger than 200 nucleotides, are termed long non-coding RNAs (lncRNAs), and play fundamental roles in diverse cellular processes. LncRNAs are subject to dynamic chemical modification, adding another layer of complexity to our understanding of the potential roles that lncRNAs play in health and disease. Many lncRNAs regulate transcriptional programs by influencing the epigenetic state through direct interactions with chromatin-modifying proteins...
June 1, 2018: Frontiers in Bioscience (Landmark Edition)
https://www.readbyqxmd.com/read/29744951/circulating-lncrna-ifng-as1-expression-correlates-with-increased-disease-risk-higher-disease-severity-and-elevated-inflammation-in-patients-with-coronary-artery-disease
#8
Yahuan Xu, Bibo Shao
BACKGROUND: This study aimed to investigate the associations of circulating long, non-coding (lncRNA) IFNG-AS1, lncRNA ANRIL and lncRNA ITSN1 relative expressions with disease risk, severity and inflammatory cytokines levels in coronary artery disease (CAD) patients. METHODS: One hundred and ninety-one patients suspected of CAD who underwent coronary angiography were consecutively enrolled in this casecontrol study, and divided into CAD patients (N = 102) and controls (N = 89) according to coronary angiographic results...
May 9, 2018: Journal of Clinical Laboratory Analysis
https://www.readbyqxmd.com/read/29732560/single-nucleotide-polymorphisms-in-long-noncoding-rna-anril-are-not-associated-with-severe-periodontitis-but-with-adverse-cardiovascular-events-among-patients-with-cardiovascular-disease
#9
S Schulz, L Seitter, K Werdan, B Hofmann, H-G Schaller, A Schlitt, S Reichert
BACKGROUND AND OBJECTIVE: Biological plausibility of an association between severe periodontitis and cardiovascular disease (CVD) has been proven. Genetic characteristics play an important role in both complex inflammatory diseases. Polymorphisms (single nucleotide polymorphisms [SNPs]) in the long noncoding RNA, antisense noncoding RNA in the INK4 locus (ANRIL), were shown to play a leading role in both diseases. The primary objectives of the study were to assess, among cardiovascular (CV angiographically proven ≥50% stenosis of a main coronary artery) patients, the impact of ANRIL SNPs rs133049 and rs3217992 on the severity of periodontitis and the previous history of coronary events, as well as on the occurrence of further adverse CV events...
May 6, 2018: Journal of Periodontal Research
https://www.readbyqxmd.com/read/29724053/correction-sarkar-d-et-al-multiple-isoforms-of-anril-in-melanoma-cells-structural-complexity-suggests-variations-in-processing-int-j-mol-sci-2017-18-1378
#10
Debina Sarkar, Ali Oghabian, Pasani K Bodiyabadu, Wayne R Joseph, Euphemia Y Leung, Graeme J Finlay, Bruce C Baguley, Marjan E Askarian-Amiri
No abstract text is available yet for this article.
May 2, 2018: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/29722077/anril-as-a-genetic-marker-for-cardiovascular-events-in-renal-transplant-patients-an-observational-follow-up-cohort-study
#11
Ariadna Arbiol-Roca, Ariadna Padró-Miquel, Anna Vidal-Alabró, Miquel Hueso, Pere Fontova, Oriol Bestard, Ines Rama, Joan Torras, Josep M Grinyó, Pedro Alía-Ramos, Josep Maria Cruzado, Nuria Lloberas
Cardiovascular disease is the leading cause of morbidity and mortality in kidney transplant recipients. Several single-nucleotide polymorphisms (SNPs) in the ANRIL gene pathway have been associated with cardiovascular events (CE). The main objective was to ascertain whether ANRIL (rs10757278) and CARD8 (rs2043211) SNPs could mediate susceptibility to CE. This was an observational follow-up cohort study of renal transplant recipients at Bellvitge University Hospital (Barcelona) from 2000 to 2014. A total of 505 recipients were followed up until achievement of a CE...
May 2, 2018: Transplant International: Official Journal of the European Society for Organ Transplantation
https://www.readbyqxmd.com/read/29713948/association-study-of-anril-genetic-variants-and-multiple-sclerosis
#12
Maryam Rezazadeh, Jalal Gharesouran, Mohsen Moradi, Rezvan Noroozi, Mir Davood Omrani, Mohammad Taheri, Soudeh Ghafouri-Fard
Multiple sclerosis (MS) is an autoimmune disorder of central nervous system with several genetic and environmental risk factors. Genes with regulatory roles on immune system have been implicated in its pathogenesis. Recently, long non-coding RNAs (lncRNAs) have been demonstrated to control some aspects of immune response. Among them is antisense non-coding RNA in the INK4 locus (ANRIL) whose involvement in NF-κB signaling pathway has been highlighted. In the current study, we evaluated the association between rs1333045, rs4977574, rs1333048, and rs10757278 variants of ANRIL and MS risk in a population of 410 Iranian MS patients and 410 healthy subjects...
April 30, 2018: Journal of Molecular Neuroscience: MN
https://www.readbyqxmd.com/read/29629612/the-9p21-locus-as-a-potential-therapeutic-target-and-prognostic-marker-in-colorectal-cancer
#13
Afsane Bahrami, Seyed Mahdi Hassanian, Majid Khazaei, Masoumeh Gharib, Mahsa Rahmani, Hamid Fiuji, Mir Hadi Jazayeri, Mehrdad Moetamani-Ahmadi, Gordon A Ferns, Amir Avan
Colorectal cancer (CRC) is a major cause of cancer-related-death worldwide. Despite extensive efforts to identify valid biomarkers for the risk stratification of CRC patients, there are few of proven clinical utility. It is recognized that genetic factors play a major role in determining susceptibility to CRC. Recent genome-wide association studies have demonstrated common genetic variants in a region on chromosome 9p21 associated with an increased risk of CRC. Several genetic polymorphisms have been identified in this region that are associated with CRC...
April 2018: Pharmacogenomics
https://www.readbyqxmd.com/read/29600544/down-regulated-long-non-coding-rna-anril-restores-the-learning-and-memory-abilities-and-rescues-hippocampal-pyramidal-neurons-from-apoptosis-in-streptozotocin-induced-diabetic-rats-via-the-nf-%C3%AE%C2%BAb-signaling-pathway
#14
Xin Wen, Xin-Rui Han, Yong-Jian Wang, Shan Wang, Min Shen, Zi-Feng Zhang, Shao-Hua Fan, Qun Shan, Liang Wang, Meng-Qiu Li, Bin Hu, Chun-Hui Sun, Dong-Mei Wu, Jun Lu, Yuan-Lin Zheng
Diabetes often causes learning and memory deficits, which leads to unfavorable behavioral performance. In this study, we investigated the effects of long non-coding RNA (lncRNA) ANRIL on learning, memory abilities, and hippocampal neuronal apoptosis via the NF-κB signaling pathway in streptozotocin (STZ)-induced diabetic rats. After successful establishment of diabetic rat models, the subjects were then assigned into the DM, DM + si-ANRIL, DM + si-negative control (si-NC) groups, as well as an additional normal group...
March 30, 2018: Journal of Cellular Biochemistry
https://www.readbyqxmd.com/read/29582492/long-non-coding-rnas-in-melanoma
#15
Xin Yu, Heyi Zheng, Gary Tse, Matthew Tv Chan, William Kk Wu
Melanoma is the most lethal cutaneous cancer with a highly aggressive and metastatic phenotype. While recent genetic and epigenetic studies have shed new insights into the mechanism of melanoma development, the involvement of regulatory non-coding RNAs remain unclear. Long non-coding RNAs (lncRNAs) are a group of endogenous non-protein-coding RNAs with the capacity to regulate gene expression at multiple levels. Recent evidences have shown that lncRNAs can regulate many cellular processes, such as cell proliferation, differentiation, migration and invasion...
March 26, 2018: Cell Proliferation
https://www.readbyqxmd.com/read/29581867/long-noncoding-rna-anril-as-a-novel-biomarker-of-lymph-node-metastasis-and-prognosis-in-human-cancer-a-meta-analysis
#16
Han Wang, Yang Liu, Jianhua Zhong, Chenglong Wu, Yuantang Zhong, Gang Yang, Jinghua Zhang, Aifa Tang
Dysregulation of the long noncoding RNA antisense noncoding RNA in the INK4 locus (ANRIL) has been reported in various solid tumors. We performed a synthetic analysis to clarify the clinical value of ANRIL as a prognostic indicator in malignant tumors. Article collection was conducted using several electronic databases, including PubMed, Web of Science, Medline, OVID and Embase (up to July 14 2017). Thirteen original studies and 1172 total patients were included in the meta-analysis. There was a significant positive association between the high expression level of ANRIL and lymph node metastasis (OR = 4...
March 6, 2018: Oncotarget
https://www.readbyqxmd.com/read/29545723/coordinated-transcription-of-anril-and-p16-genes-is-silenced-by-p16-dna-methylation
#17
Ying Gan, Wanru Ma, Xiuhong Wang, Juanli Qiao, Baozhen Zhang, Chenghua Cui, Zhaojun Liu, Dajun Deng
Objective: To investigate the relationship between the transcription of ANRIL , P15 , P14 and P16 at the same locus and the regulation mechanism of ANRIL . Methods: Publicly available database of Cancer Cell Line Encyclopedia (CCLE) was used in bioinformatic analyses. Methylation of CpG islands was detected by denaturing high performance liquid chromatography (DHPLC). Gene transcript levels were determined using quantitative real-time polymerase chain reaction (qRT-PCR) assays...
February 2018: Chinese Journal of Cancer Research, Chung-kuo Yen Cheng Yen Chiu
https://www.readbyqxmd.com/read/29520337/long-non-coding-rna-anril-is-associated-with-a-poor-prognosis-of-osteosarcoma-and-promotes-tumorigenesis-via-pi3k-akt-pathway
#18
Guangyang Yu, Gang Liu, Dongtang Yuan, Jian Dai, Yin Cui, Xiaoming Tang
Aim: Increasing evidence has shown that long noncoding RNAs (lncRNAs) ANRIL may function as oncogenes in various types of malignancies. However, there is still a lack of knowledge concerning its role in osteosarcoma (OS). In this study, we aimed to investigate the influence of ANRIL on cell proliferation and invasion of OS and to determine its association with clinicopathological features of the patients. Methods: The tumor specimens and the adjacent normal tissues were collected from 57 OS patients and the expression level of ANRIL was quantified by RT-qPCR...
June 2018: Journal of Bone Oncology
https://www.readbyqxmd.com/read/29504701/circulating-long-noncoding-rna-act-as-potential-novel-biomarkers-for-diagnosis-and-prognosis-of-non-small-cell-lung-cancer
#19
Yujiao Xie, Yi Zhang, Lutao Du, Xiumei Jiang, Suzhen Yan, Weili Duan, Juan Li, Yao Zhan, Lili Wang, Shujun Zhang, Shuhai Li, Lishui Wang, Shuo Xu, Chuanxin Wang
Lung cancer is the first leading cause of cancer deaths worldwide. Non-small cell lung cancer (NSCLC) is the most common type of lung cancer. Increasing evidence shows that long noncoding RNA (lncRNA) are capable of modulating tumor initiation, proliferation and metastasis. In the present study, we aimed to evaluate whether circulating lncRNA could be used as biomarkers for diagnosis and prognosis of NSCLC. Expression profiles of 14 lncRNA selected from other studies were validated in 20 pairs of tissues by quantitative real-time PCR, and the dysregulated lncRNA thus identified were further validated in serum samples from two independent cohorts along with three tumor makers (CEA, CYFRA21-1, and SCCA)...
May 2018: Molecular Oncology
https://www.readbyqxmd.com/read/29463902/upregulation-of-sox2-activated-lncrna-anril-promotes-nasopharyngeal-carcinoma-cell-growth
#20
Jian-Hui Wu, Jian-Ming Tang, Jia Li, Xiong-Wen Li
Recent molecularly targeted approaches have gained advances in nasopharyngeal carcinoma treatment. However, the estimated five-year survival rate has not met the desired degree of improvement. Here, we report that upregulation of the expression of the SOX2-activated lncRNA ANRIL is involved in nasopharyngeal carcinoma. ANRIL has been found to be upregulated in clinical nasopharyngeal carcinoma. Using genetic approaches targeting ANRIL in nasopharyngeal carcinoma cells, we found that the knockdown of ANRIL inhibits cell proliferation in vitro and in vivo...
February 20, 2018: Scientific Reports
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