keyword
https://read.qxmd.com/read/38656880/hepatocyte-specific-mettl3-ablation-by-alb-icre-mice-gpt-but-not-by-alb-cre-mice-jax-resulted-in-acute-liver-failure-alf-and-postnatal-lethality
#1
JOURNAL ARTICLE
Shihao Huang, Yingchun Li, Bingjie Wang, Zhihao Zhou, Yonglong Li, Lingjun Shen, Jinge Cong, Liuxin Han, Xudong Xiang, Jiawei Xia, Danhua He, Zhanlin Zhao, Ying Zhou, Qiwen Li, Guanqi Dai, Hanzhang Shen, Taoyan Lin, Aibing Wu, Junshuang Jia, Dong Xiao, Jing Li, Wentao Zhao, Xiaolin Lin
AIM: In 2019, to examine the functions of METTL3 in liver and underlying mechanisms, we generated mice with hepatocyte-specific METTL3 homozygous knockout (METTL3Δhep ) by simultaneously crossing METTL3fl/fl mice with Alb-iCre mice (GPT) or Alb-Cre mice (JAX), respectively. In this study, we explored the potential reasons why hepatocyte-specific METTL3 homozygous disruption by Alb-iCre mice (GPT), but not by Alb-Cre mice (JAX), resulted in acute liver failure (ALF) and then postnatal lethality...
April 22, 2024: Aging
https://read.qxmd.com/read/38654822/cadherin-adhesion-complexes-direct-cell-aggregation-in-the-epithelial-transition-of-wnt-induced-nephron-progenitor-cells
#2
Balint Der, Helena Bugacov, Bohdana-Myroslava Briantseva, Andrew P McMahon
UNLABELLED: In the developing mammalian kidney, nephron formation is initiated by a subset of nephron progenitor cells (NPCs). Wnt input activates a β-catenin ( Ctnnb1 )-driven, transcriptional nephrogenic program. In conjunction, induced mesenchymal NPCs transition through a pre-tubular aggregate to an epithelial renal vesicle, the precursor for each nephron. How this critical mesenchymal-to-epithelial transition (MET) is regulated is unclear. In an in vitro mouse NPC culture model, activation of the Wnt pathway results in the aggregation of induced NPCs into closely-packed, cell clusters...
August 27, 2023: bioRxiv
https://read.qxmd.com/read/38654540/ancestral-tale-homeobox-protein-transcription-factor-regulates-actin-dynamics-and-cellular-activities-of-protozoan-parasite-entamoeba-invadens
#3
JOURNAL ARTICLE
Meenakshi Pandey, Shilpa Sarkar, Sudip K Ghosh
Entamoeba histolytica causes invasive amoebiasis, an important neglected tropical disease with a significant global health impact. The pathogenicity and survival of E. histolytica and its reptilian equivalent, Entamoeba invadens, relies on its ability to exhibit efficient motility, evade host immune responses, and exploit host resources, all of which are governed by the actin cytoskeleton remodeling. Our study demonstrates the early origin and the regulatory role of TALE homeobox protein EiHbox1 in actin-related cellular processes...
April 23, 2024: Molecular Microbiology
https://read.qxmd.com/read/38654104/designer-peptide-dna-cytoskeletons-regulate-the-function-of-synthetic-cells
#4
JOURNAL ARTICLE
Margaret L Daly, Kengo Nishi, Stephen J Klawa, Kameryn Y Hinton, Yuan Gao, Ronit Freeman
The bottom-up engineering of artificial cells requires a reconfigurable cytoskeleton that can organize at distinct locations and dynamically modulate its structural and mechanical properties. Here, inspired by the vast array of actin-binding proteins and their ability to reversibly crosslink or bundle filaments, we have designed a library of peptide-DNA crosslinkers varying in length, valency and geometry. Peptide filaments conjoint through DNA hybridization give rise to tactoid-shaped bundles with tunable aspect ratios and mechanics...
April 23, 2024: Nature Chemistry
https://read.qxmd.com/read/38653448/unsolved-morphogenesis-problems-and-the-hidden-order
#5
REVIEW
A V Melkikh
In this work, the morphogenesis mechanisms are considered from the complexity perspective. It is shown that both morphogenesis and the functioning of organs should be unstable in the case of short-range interaction potentials. The repeatability of forms during evolution is a strong argument for its directionality. The formation of organs during evolution can occur only in the presence of a priori information about the structure of such an organ. The focus of the discussion is not merely on constraining potential possibilities but on the concept of directed evolution itself...
April 21, 2024: Bio Systems
https://read.qxmd.com/read/38652699/lack-of-mtorc2-signalling-in-cd11c-myeloid-cells-inhibits-their-migration-and-ameliorates-experimental-colitis
#6
JOURNAL ARTICLE
Aline Ignacio, Marcella Cipelli, Tatiane Takiishi, Cristhiane Favero Aguiar, Fernanda Fernandes Terra, Bruno Ghirotto, Eloisa Martins Silva, Angela Castoldi, Yuli Thamires Magalhães, Tiago Antonio, Barbara Nunes Padovani, Meire Ioshie Hiyane, Vinicius Andrade-Oliveira, Fabio Luis Forti, Niels Olsen Saraiva Camara
The Mammalian Target of Rapamycin (mTOR) pathway plays a key role in determining immune cells function through modulation of their metabolic status. By specific deletion of Rictor in CD11c+ myeloid cells (referred to here as CD11cRicΔ/Δ), this study investigated the role of mTOR complex 2 (mTORC2) signalling in dendritic cells (DCs) function in mice. We showed that upon DSS-induced colitis, lack of mTORC2 signalling CD11c+ cells diminishes colitis score, and abrogates dendritic cell (DC) migration to the mesenteric lymph nodes (MLN), thereby diminishing the infiltration of T helper (Th) 17 cells in the lamina propria (LP) and subsequent inflammation...
April 23, 2024: Journal of Leukocyte Biology
https://read.qxmd.com/read/38652325/the-%C3%AE-tubulin-acetyltransferase-atat1-structure-cellular-functions-and-its-emerging-role-in-human-diseases
#7
REVIEW
Angela Iuzzolino, Francesca Romana Pellegrini, Dante Rotili, Francesca Degrassi, Daniela Trisciuoglio
The acetylation of α-tubulin on lysine 40 is a well-studied post-translational modification which has been associated with the presence of long-lived stable microtubules that are more resistant to mechanical breakdown. The discovery of α-tubulin acetyltransferase 1 (ATAT1), the enzyme responsible for lysine 40 acetylation on α-tubulin in a wide range of species, including protists, nematodes, and mammals, dates to about a decade ago. However, the role of ATAT1 in different cellular activities and molecular pathways has been only recently disclosed...
April 23, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38651369/cadmium-highlights-common-and-specific-responses-of-two-freshwater-sentinel-species-dreissena-polymorpha-and-dreissena-rostriformis-bugensis
#8
JOURNAL ARTICLE
Florence Bultelle, Aimie Le Saux, Elise David, Arnaud Tanguy, Simon Devin, Stéphanie Olivier, Agnès Poret, Philippe Chan, Fanny Louis, Laurence Delahaut, Sandrine Pain-Devin, Romain Péden, David Vaudry, Frank Le Foll, Béatrice Rocher
Zebra mussel (ZM), Dreissena polymorpha , commonly used as a sentinel species in freshwater biomonitoring, is now in competition for habitat with quagga mussel (QM), Dreissena rostriformis bugensis. This raises the question of the quagga mussel's use in environmental survey. To better characterise QM response to stress compared with ZM, both species were exposed to cadmium (100 µg·L-1 ), a classic pollutant, for 7 days under controlled conditions. The gill proteomes were analysed using two-dimensional electrophoresis coupled with mass spectrometry...
March 26, 2024: Proteomes
https://read.qxmd.com/read/38650143/identification-of-core-genes-of-craniopharyngioma-angiogenesis-based-on-single-cell-nuclear-transcriptome-sequencing
#9
JOURNAL ARTICLE
Jinshi Zhang, Lin Xu, Jiye Ye, Chunming Xu, Bowen Wu, Jie Wu, Tao Hong
This study aimed to explore the core genes of craniopharyngioma angiogenesis for targeted vascular therapy based on single-cell nuclear transcriptome sequencing. For single-cell nuclear transcriptome sequencing, we collected six samples from the tumor center and adjacent hypothalamic tumor tissues from three patients with craniopharyngioma, as well as four normal brain tissues based on Gene Expression Omnibus. We screened genes with differential up-regulation between vascular endothelial cells of craniopharyngioma and those of normal brain tissues, performed GO and KEGG analysis, constructed the protein-protein interaction network, and selected key genes verified using immunofluorescence...
March 31, 2024: Cellular and Molecular Biology
https://read.qxmd.com/read/38650027/carrageenan-maintains-the-contractile-phenotype-of-vascular-smooth-muscle-cells-by-increasing-macromolecular-crowding-in-vitro
#10
JOURNAL ARTICLE
Qing Liu, Hong-Jing Jiang, Yin-Di Wu, Jian-Dong Li, Xu-Heng Sun, Cong Xiao, Jian-Yi Xu, Zhan-Yi Lin
BACKGROUND: The contractile phenotype of vascular smooth muscle cells (VSMCs) results in good diastolic and contractile capacities, and its altered function is the main pathophysiological basis for diseases such as hypertension. VSMCs exist as a synthetic phenotype in vitro, making it challenging to maintain a contractile phenotype for research. It is widely recognized that the common medium in vitro is significantly less crowded than in the in vivo environment. Additionally, VSMCs have a heightened sense for detecting changes in medium crowding...
April 22, 2024: European Journal of Medical Research
https://read.qxmd.com/read/38649832/metabolomics-and-proteomics-insights-into-subacute-ruminal-acidosis-etiology-and-inhibition-of-proliferation-of-yak-rumen-epithelial-cells-in-vitro
#11
JOURNAL ARTICLE
JunMei Wang, Liyuan Shi, Xiaohong Zhang, Rui Hu, Ziqi Yue, Huawei Zou, Quanhui Peng, Yahui Jiang, Zhisheng Wang
BACKGROUND: Untargeted metabolomics and proteomics were employed to investigate the intracellular response of yak rumen epithelial cells (YRECs) to conditions mimicking subacute rumen acidosis (SARA) etiology, including exposure to short-chain fatty acids (SCFA), low pH5.5 (Acid), and lipopolysaccharide (LPS) exposure for 24 h. RESULTS: These treatments significantly altered the cellular morphology of YRECs. Metabolomic analysis identified significant perturbations with SCFA, Acid and LPS treatment affecting 259, 245 and 196 metabolites (VIP > 1, P < 0...
April 22, 2024: BMC Genomics
https://read.qxmd.com/read/38649752/characterization-of-transcriptional-profiles-associated-with-stress-induced-neuronal-activation-in-arc-gfp-mice
#12
JOURNAL ARTICLE
Tamer Butto, Monika Chanu Chongtham, Kanak Mungikar, Dewi Hartwich, Matthias Linke, Nicolas Ruffini, Konstantin Radyushkin, Susann Schweiger, Jennifer Winter, Susanne Gerber
Chronic stress has become a predominant factor associated with a variety of psychiatric disorders, such as depression and anxiety, in both human and animal models. Although multiple studies have looked at transcriptional changes after social defeat stress, these studies primarily focus on bulk tissues, which might dilute important molecular signatures of social interaction in activated cells. In this study, we employed the Arc-GFP mouse model in conjunction with chronic social defeat (CSD) to selectively isolate activated nuclei (AN) populations in the ventral hippocampus (vHIP) and prefrontal cortex (PFC) of resilient and susceptible animals...
April 22, 2024: Molecular Psychiatry
https://read.qxmd.com/read/38649438/klf5-regulates-actin-remodeling-to-enhance-the-metastasis-of-nasopharyngeal-carcinoma
#13
JOURNAL ARTICLE
Zhenyu Yang, Yanfu Peng, Yaqin Wang, Panyang Yang, Zhuohui Huang, Tingqiu Quan, Xudong Xu, Peng Sun, Ying Sun, Jiawei Lv, Denghui Wei, Guan-Qun Zhou
Transcription factors (TFs) engage in various cellular essential processes including differentiation, growth and migration. However, the master TF involved in distant metastasis of nasopharyngeal carcinoma (NPC) remains largely unclear. Here we show that KLF5 regulates actin remodeling to enhance NPC metastasis. We analyzed the msVIPER algorithm-generated transcriptional regulatory networks and identified KLF5 as a master TF of metastatic NPC linked to poor clinical outcomes. KLF5 regulates actin remodeling and lamellipodia formation to promote the metastasis of NPC cells in vitro and in vivo...
April 22, 2024: Oncogene
https://read.qxmd.com/read/38649191/wallerian-degeneration-and-clearance-of-olfactory-receptor-neuron-axons-following-drosophila-antennal-transection
#14
JOURNAL ARTICLE
Thomas J Waller, Laura J Smithson, Catherine A Collins
Neurons extend their axons and dendrites over long distances and rely on evolutionarily conserved mechanisms to maintain the cellular structure and function of neurites at a distance from their cell body. Neurites that lose connection with their cell body following damage or stressors to their cytoskeleton undergo a programmed self-destruction process akin to apoptosis but using different cellular machinery, termed Wallerian degeneration. While first described for vertebrate axons by Augustus Waller in 1850, key discoveries of the enzymes that regulate Wallerian degeneration were made through forward genetic screens in Drosophila melanogaster Powerful techniques for genetic manipulation and visualization of single neurons combined with simple methods for introducing axotomy (neuron severing) to certain neuron types in Drosophila have enabled the discovery and study of the cellular machinery responsible for Wallerian degeneration, in addition to mechanisms that enable clearance of the resulting debris...
April 22, 2024: Cold Spring Harbor Protocols
https://read.qxmd.com/read/38647525/positive-and-negative-durotaxis-mechanisms-and-emerging-concepts
#15
JOURNAL ARTICLE
Mathilde Mathieu, Aleksi Isomursu, Johanna Ivaska
Cell migration is controlled by the coordinated action of cell adhesion, cytoskeletal dynamics, contractility and cell extrinsic cues. Integrins are the main adhesion receptors to ligands of the extracellular matrix (ECM), linking the actin cytoskeleton to the ECM and enabling cells to sense matrix rigidity and mount a directional cell migration response to stiffness gradients. Most models studied show preferred migration of single cells or cell clusters towards increasing rigidity. This is referred to as durotaxis, and since its initial discovery in 2000, technical advances and elegant computational models have provided molecular level details of stiffness sensing in cell migration...
April 15, 2024: Journal of Cell Science
https://read.qxmd.com/read/38647027/pan-microscopic-examination-of-monkeypox-virus-in-trophoblasts-cells-reveals-new-insights-into-virions-release-through-filopodia-like-projections
#16
JOURNAL ARTICLE
Jonatane Andrieu, Margaux Valade, Marion Lebideau, Florence Bretelle, Jean-Louis Mège, Nathalie Wurtz, Soraya Mezouar, Bernard La Scola, Jean-Pierre Baudoin
Vertical transmission has been described following monkeypox virus (MPXV) infection in pregnant women. The presence of MPXV has been reported in the placenta from infected women, but whether pathogens colonize placenta remains unexplored. We identify trophoblasts as a target cell for MPXV replication. In a pan-microscopy approach, we decipher the specific infectious cycle of MPXV and inner cellular structures in trophoblasts. We identified the formation of a specialized region for viral morphogenesis and replication in placental cells...
April 2024: Journal of Medical Virology
https://read.qxmd.com/read/38646780/involvement-of-kinesins-in-skeletal-dysplasia-a-review
#17
REVIEW
Roufaida Bouchenafa, Francesca Manuela de Sousa Brito, Katarzyna Anna Pirog
Skeletal dysplasias are group of rare genetic diseases resulting from mutations in genes encoding structural proteins of the cartilage extracellular matrix (ECM), signaling molecules, transcription factors, epigenetic modifiers, and several intracellular proteins. Cell division, organelle maintenance, and intracellular transport are all orchestrated by the cytoskeleton associated proteins, and intracellular processes effected through microtubule-associated movement are important for the function of skeletal cells...
April 22, 2024: American Journal of Physiology. Cell Physiology
https://read.qxmd.com/read/38645878/integrated-analysis-identified-tgfbi-as-a-biomarker-of-disease-severity-and-prognosis-correlated-with-immune-infiltrates-in-patients-with-sepsis
#18
JOURNAL ARTICLE
Mingjie Shi, Yue Wei, Runmin Guo, Fei Luo
BACKGROUND: Sepsis is a major contributor to morbidity and mortality among hospitalized patients. This study aims to identify markers associated with the severity and prognosis of sepsis, providing new approaches for its management and treatment. METHODS: Data were mined from the Gene Expression Omnibus (GEO) databases and were analyzed by multiple statistical methods like the Spearman correlation coefficient, Kaplan-Meier analysis, Cox regression analysis, and functional enrichment analysis...
2024: Journal of Inflammation Research
https://read.qxmd.com/read/38645057/the-microtubule-regulator-efa-6-forms-spatially-restricted-cortical-foci-dependent-on-its-intrinsically-disordered-region-and-interactions-with-tubulins
#19
Anjali Sandhu, Xiaohui Lyu, Xinghaoyun Wan, Xuefeng Meng, Ngang Heok Tang, Gilberto Gonzalez, Ishana N Syed, Lizhen Chen, Yishi Jin, Andrew D Chisholm
UNLABELLED: Microtubules (MTs) are dynamic components of the cytoskeleton and play essential roles in morphogenesis and maintenance of tissue and cell integrity. Despite recent advances in understanding MT ultrastructure, organization, and growth control, how cells regulate MT organization at the cell cortex remains poorly understood. The EFA-6/EFA6 proteins are recently identified membrane-associated proteins that inhibit cortical MT dynamics. Here, combining visualization of endogenously tagged C...
April 14, 2024: bioRxiv
https://read.qxmd.com/read/38643945/inhibition-of-yap-taz-pathway-contributes-to-the-cytotoxicity-of-silibinin-in-mcf-7-and-mda-mb-231-human-breast-cancer-cells
#20
JOURNAL ARTICLE
Jianing Fu, Weiwei Liu, Siyu Liu, Ruxiao Zhao, Toshihiko Hayashi, Haina Zhao, Yinlanqi Xiang, Kazunori Mizuno, Shunji Hattori, Hitomi Fujisaki, Takashi Ikejima
Breast cancer is one of the most common cancers threatening women's health. Our previous study found that silibinin induced the death of MCF-7 and MDA-MB-231 human breast cancer cells. We noticed that silibinin-induced cell damage was accompanied by morphological changes, including the increased cell aspect ratio (cell length/width) and decreased cell area. Besides, the cytoskeleton is also destroyed in cells treated with silibinin. YAP/TAZ, a mechanical signal sensor interacted with extracellular pressure, cell adhesion area and cytoskeleton, is also closely associated with cell survival, proliferation and migration...
April 19, 2024: Cellular Signalling
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