keyword
https://read.qxmd.com/read/38647235/single-cell-analysis-revealed-a-potential-role-of-t-cell-exhaustion-in-colorectal-cancer-with-liver-metastasis
#1
JOURNAL ARTICLE
Tianlong Ling, Cheng Zhang, Ye Liu, Chunhui Jiang, Lei Gu
Liver metastasis (LM) is an important factor leading to colorectal cancer (CRC) mortality. However, the effect of T-cell exhaustion on LM in CRC is unclear. Single-cell sequencing data derived from the Gene Expression Omnibus database. Data were normalized using the Seurat package and subsequently clustered and annotated into different cell clusters. The differentiation trajectories of epithelial cells and T cells were characterized based on pseudo-time analysis. Single-sample gene set enrichment analysis (ssGSEA) was used to calculate enrichment scores for different cell clusters and to identify enriched biological pathways...
April 2024: Journal of Cellular and Molecular Medicine
https://read.qxmd.com/read/38617189/structure-and-function-of-therapeutic-antibodies-approved-by-the-us-fda-in-2023
#2
REVIEW
William R Strohl
In calendar year 2023, the United States Food and Drug Administration (US FDA) approved a total of 55 new molecular entities, of which 12 were in the class of therapeutic antibodies. Besides antibody protein drugs, the US FDA also approved another five non-antibody protein drugs, making the broader class of protein drugs about 31% of the total approved drugs. Among the 12 therapeutic antibodies approved by the US FDA, 8 were relatively standard IgG formats, 3 were bivalent, bispecific antibodies and 1 was a trivalent, bispecific antibody...
April 2024: Antibody Therapeutics
https://read.qxmd.com/read/38612896/fibrocyte-phenotype-of-entpd1-cd55-cells-and-its-association-with-pain-in-osteoarthritic-synovium
#3
JOURNAL ARTICLE
Maho Tsuchiya, Yoshihisa Ohashi, Kensuke Fukushima, Yusei Okuda, Arisa Suto, Takashi Matsui, Yoshio Kodera, Masashi Sato, Ayumi Tsukada, Gen Inoue, Masashi Takaso, Kentaro Uchida
Osteoarthritis (OA) is a prevalent degenerative joint disorder characterized by cartilage erosion, structural changes, and inflammation. Synovial fibroblasts play a crucial role in OA pathophysiology, with abnormal fibroblastic cells contributing significantly to joint pathology. Fibrocytes, expressing markers of both hematopoietic and stromal cells, are implicated in inflammation and fibrosis, yet their marker and role in OA remain unclear. ENTPD1, an ectonucleotidase involved in purinergic signaling and expressed in specific fibroblasts in fibrotic conditions, led us to speculate that ENTPD1 plays a role in OA pathology by being expressed in fibrocytes...
April 6, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38601478/cd14-facilitates-perinatal-human-cytomegalovirus-infection-in-biliary-epithelial-cells-via-cd55
#4
JOURNAL ARTICLE
Liang Su, Yan Chen, Ming Fu, Hezhen Wang, Yanlu Tong, Zefeng Lin, Hongjiao Chen, Huiting Lin, Yi Chen, Bing Zhu, Sige Ma, Yiyi Xiao, Junyu Huang, Ziyang Zhao, Fenjie Li, Rongchen Ye, Hongguang Shi, Zhe Wang, Jixiao Zeng, Zhe Wen, Minhua Luo, Huimin Xia, Ruizhong Zhang
BACKGROUND & AIMS: A high human cytomegalovirus (HCMV) infection rate accompanied by an increased level of bile duct damage is observed in the perinatal period. The possible mechanism was investigated. METHODS: A total of 1,120 HCMV-positive and 9,297 HCMV-negative children were recruited, and depending on age, their liver biochemistry profile was compared. Fetal and infant biliary epithelial cells (F-BECs and I-BECs, respectively) were infected with HCMV, and the differences in cells were revealed by proteomic analysis...
May 2024: JHEP reports: innovation in hepatology
https://read.qxmd.com/read/38598858/pozelimab-a-human-monoclonal-immunoglobulin-for-the-treatment-of-chaple-disease
#5
REVIEW
Manmeet Kaur, Saurav Misra
The complement is a crucial factor of the innate immune system. However, its activation can lead to various diseases, so it needs to be controlled. In mammals, surface-bound complement regulatory proteins safeguard cells from uncontrolled complement-mediated lysis. One of the human complement regulators is CD55, also known as the decay-accelerating factor (DAF), a single-chain, type I cell surface protein anchored to glycosylphosphatidylinositol (GPI). The genetic loss of the complement regulatory protein CD55 leads to a fatal illness known as CHAPLE disease...
April 11, 2024: Journal of Basic and Clinical Physiology and Pharmacology
https://read.qxmd.com/read/38528725/a-21-bp-deletion-in-the-complement-regulator-cd55-promotor-region-is-associated-with-multifocal-motor-neuropathy-and-its-disease-course
#6
JOURNAL ARTICLE
Jeroen W Bos, Ewout J N Groen, Henny G Otten, Kevin Budding, Ruben P A van Eijk, Chantall Curial, Tineke Kardol-Hoefnagel, H Stephan Goedee, Leonard H van den Berg, W Ludo van der Pol
BACKGROUND AND AIMS: To further substantiate the role of antibody-mediated complement activation in multifocal motor neuropathy (MMN) immunopathology, we investigated the distribution of promotor polymorphisms of genes encoding the membrane-bound complement regulators CD46, CD55, and CD59 in patients with MMN and controls, and evaluated their association with disease course. METHODS: We used Sanger sequencing to genotype five common polymorphisms in the promotor regions of CD46, CD55, and CD59 in 133 patients with MMN and 380 controls...
March 25, 2024: Journal of the Peripheral Nervous System: JPNS
https://read.qxmd.com/read/38496511/the-complement-regulator-cd55-modulates-tlr9-signaling-and-supports-survival-in-marginal-zone-b-cells
#7
Iris Lee, Ivana Ling, Sonam Verma, Wumei Blanche, Christine T N Pham, Peggy L Kendall
Marginal zone (MZ) B cells bridge innate and adaptive immunity by sensing bloodborne antigens and producing rapid antibody and cytokine responses. CD55 is a membrane-bound complement regulator that interferes with complement activation, an important component of innate immunity. CD55 also regulates adaptive immunity-CD55 downregulation is critical for germinal center reactions. MZ B cells also express low CD55, but its role in MZ B cell function is unknown. Using germline knockout mice, we found that similar numbers of MZ B cells are initially established in 3-week-old CD55-deficient mice compared to wild-type (WT) mice...
March 4, 2024: bioRxiv
https://read.qxmd.com/read/38441324/revisiting-the-relationship-between-complement-and-ulcerative-colitis
#8
REVIEW
Yujie Ma, Kaicheng Zhang, Yuanyuan Wu, Xiaoyan Fu, Shujuan Liang, Meiyu Peng, Juntang Guo, Meifang Liu
Ulcerative colitis (UC) is an inflammatory bowel disorder (IBD) characterized by relapsing chronic inflammation of the colon that causes continuous mucosal inflammation. The global incidence of UC is steadily increasing. Immune mechanisms are involved in the pathogenesis of UC, of which complement is shown to play a critical role by inducing local chronic inflammatory responses that promote tissue damage. However, the function of various complement components in the development of UC is complex and even paradoxical...
November 2023: Scandinavian Journal of Immunology
https://read.qxmd.com/read/38402840/large-scale-analysis-reveals-splicing-biomarkers-for-tuberculosis-progression-and-prognosis
#9
JOURNAL ARTICLE
Hongli Lai, Mengyuan Lyu, Hongxia Ruan, Yang Liu, Tangyuheng Liu, Shuting Lei, Yuling Xiao, Shu Zhang, Binwu Ying
BACKGROUND: Emerging evidence suggests that aberrant alternative splicing (AS) may play an important role in tuberculosis (TB). However, current knowledge regarding the value of AS in TB progression and prognosis remains unclear. METHOD: Public RNA-seq datasets related to TB progression and prognosis were searched and AS analyses were conducted based on SUPPA2. Percent spliced in (PSI) was used for quantifying AS events and multiple machine learning (ML) methods were employed to construct predictive models...
February 19, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38391955/a-proteomic-investigation-to-discover-candidate-proteins-involved-in-novel-mechanisms-of-5-fluorouracil-resistance-in-colorectal-cancer
#10
JOURNAL ARTICLE
Mario Ortega Duran, Sadr Ul Shaheed, Christopher W Sutton, Steven D Shnyder
One of the main obstacles to therapeutic success in colorectal cancer (CRC) is the development of acquired resistance to treatment with drugs such as 5-fluorouracil (5-FU). Whilst some resistance mechanisms are well known, it is clear from the stasis in therapy success rate that much is still unknown. Here, a proteomics approach is taken towards identification of candidate proteins using 5-FU-resistant sublines of human CRC cell lines generated in house. Using a multiplexed stable isotope labelling with amino acids in cell culture (SILAC) strategy, 5-FU-resistant and equivalently passaged sensitive cell lines were compared to parent cell lines by growing in Heavy medium with 2D liquid chromatography and Orbitrap Fusion™ Tribrid™ Mass Spectrometry analysis...
February 14, 2024: Cells
https://read.qxmd.com/read/38372645/critical-role-of-cd55-in-controlling-wound-healing
#11
JOURNAL ARTICLE
Lorna Kang, Maryo Kohen, Isaac McCarthy, Emma Hammelef, Hae Suk Kim, R Bapputty, Rose Gubitosi-Klug, Faruk H Orge, Timothy Kern, M Edward Medof
How reparative processes are coordinated following injury is incompletely understood. In recent studies, we showed that autocrine C3a and C5a receptor (C3ar1 and C5ar1) G protein-coupled receptor signaling plays an obligate role in vascular endothelial growth factor receptor 2 growth signaling in vascular endothelial cells. We documented the same interconnection for platelet-derived growth factor receptor growth signaling in smooth muscle cells, epidermal growth factor receptor growth signaling in epidermal cells, and fibroblast growth factor receptor signaling in fibroblasts, indicative of a generalized cell growth regulatory mechanism...
February 19, 2024: Journal of Immunology
https://read.qxmd.com/read/38366630/6-formylindolo-3-2-b-carbazole-a-potent-ligand-for-the-aryl-hydrocarbon-receptor-attenuates-concanavalin-induced-hepatitis-by-limiting-t-cell-activation-and-infiltration-of-proinflammatory-cd11b-kupffer-cells
#12
JOURNAL ARTICLE
Alkeiver S Cannon, Bryan L Holloman, Kiesha Wilson, Kathryn Miranda, Prakash S Nagarkatti, Mitzi Nagarkatti
FICZ (6-formylindolo[3,2-b]carbazole) is a potent aryl hydrocarbon receptor agonist that has a poorly understood function in the regulation of inflammation. In this study, we investigated the effect of aryl hydrocarbon receptor activation by FICZ in a murine model of autoimmune hepatitis induced by concanavalin A. High-throughput sequencing techniques such as single-cell RNA sequencing and assay for transposase accessible chromatin sequencing were used to explore the mechanisms through which FICZ induces its effects...
February 16, 2024: Journal of Leukocyte Biology
https://read.qxmd.com/read/38356516/systematic-review-and-bioinformatics-analysis-of-plasma-and-serum-extracellular-vesicles-proteome-in-type-2-diabetes
#13
JOURNAL ARTICLE
Jeanette Guadalupe Arredondo-Damián, Juan Manuel Martínez-Soto, Francisco A Molina-Pelayo, Jesús Adriana Soto-Guzmán, Luis Castro-Sánchez, Luis Fernando López-Soto, Maria Del Carmen Candia-Plata
BACKGROUND: Type 2 diabetes (T2D) is a complex metabolic ailment marked by a global high prevalence and significant attention in primary healthcare settings due to its elevated morbidity and mortality rates. The pathophysiological mechanisms underlying the onset and progression of this disease remain subjects of ongoing investigation. Recent evidence underscores the pivotal role of the intricate intercellular communication network, wherein cell-derived vesicles, commonly referred to as extracellular vesicles (EVs), emerge as dynamic regulators of diabetes-related complications...
February 15, 2024: Heliyon
https://read.qxmd.com/read/38335997/multisite-thrombosis-in-a-patient-with-paroxysmal-nocturnal-hemoglobinuria
#14
JOURNAL ARTICLE
Lennart Beckmann, Tobias D Faizy, Fabian Flottmann, Jens Fiehler, Carsten Bokemeyer, Lennart Well, Antonia Beitzen-Heineke, Florian Langer
Paroxysmal nocturnal hemoglobinuria (PNH) is an extremely rare bone marrow disorder caused by acquired mutations in the phosphatidylinositol glycan class A gene, which lead to a partial or total loss of the cellular complement regulators CD55 and CD59.1 In addition to complement-mediated hemolysis and cytopenia, venous and arterial thromboses at multiple and/or unusual sites are a common complication and occur in up to 44% of patients in historic PNH cohorts.1 2.
February 9, 2024: Hämostaseologie
https://read.qxmd.com/read/38278170/evaluating-the-efficacy-and-safety-of-pozelimab-in-patients-with-cd55-deficiency-with-hyperactivation-of-complement-angiopathic-thrombosis-and-protein-losing-enteropathy-disease-an-open-label-phase-2-and-3-study
#15
JOURNAL ARTICLE
Ahmet Ozen, Voranush Chongsrisawat, Asena Pinar Sefer, Burcu Kolukisa, Jessica J Jalbert, Karoline A Meagher, Taylor Brackin, Hagit Baris Feldman, Safa Baris, Elif Karakoc-Aydiner, Rabia Ergelen, Ivan J Fuss, Heather Moorman, Narissara Suratannon, Kanya Suphapeetiporn, Lorah Perlee, Olivier A Harari, George D Yancopoulos, Michael J Lenardo
BACKGROUND: CD55 deficiency with hyperactivation of complement, angiopathic thrombosis, and protein-losing enteropathy (CHAPLE) is an ultra-rare genetic disorder characterised by intestinal lymphatic damage, lymphangiectasia, and protein-losing enteropathy caused by overactivation of the complement system. We assessed the efficacy and safety of pozelimab, an antibody blocking complement component 5. METHODS: This open-label, single-arm, historically controlled, multicentre phase 2 and 3 study evaluated ten patients with CHAPLE disease...
January 23, 2024: Lancet
https://read.qxmd.com/read/38251551/interosseous-tendon-inflammation-in-the-hands-of-patients-with-clinically-suspect-arthralgia-analysis-of-mri-data-from-a-prospective-cohort-study
#16
JOURNAL ARTICLE
Bastiaan T van Dijk, Lambertus J Wisse, Hanna W van Steenbergen, Monique Reijnierse, Sarah J H Khidir, Marco C DeRuiter, Annette H M van der Helm-van Mil
BACKGROUND: Inflammation around the tendons of interosseous muscles of the hand (interosseous tendon inflammation) was recently observed with MRI for the first time in patients with rheumatoid arthritis and in at-risk individuals with detectable anti-citrullinated protein antibodies, generating the hypothesis that interosseous tendon inflammation precedes clinical arthritis. To better understand the role of interosseous tendon inflammation during the development of rheumatoid arthritis, we studied the frequency of interosseous tendon inflammation in healthy individuals and in those with arthralgia that was suspected of progressing to rheumatoid arthritis (ie, clinically suspect arthralgia) and the association of interosseous tendon inflammation with other symptoms of inflamed joint tissues and with clinical arthritis development...
July 2023: Lancet Rheumatology
https://read.qxmd.com/read/38244291/genomic-profiling-and-associated-b-cell-lineages-delineate-the-efficacy-of-neoadjuvant-anti-pd-1-based-therapy-in-oesophageal-squamous-cell-carcinoma
#17
JOURNAL ARTICLE
Hongyu Zhang, Haoyu Wen, Qiaoliang Zhu, Yuchen Zhang, Fengkai Xu, Teng Ma, Yifan Guo, Chunlai Lu, Xuelian Zhao, Yuan Ji, Zhiqiang Wang, Yiwei Chu, Di Ge, Jie Gu, Ronghua Liu
BACKGROUND: Neoadjuvant chemoimmunotherapy has offered novel therapeutic options for patients with locally advanced oesophageal squamous cell carcinoma (ESCC). Depicting the landscape of genomic and immune profiles is critical in predicting therapeutic responses. METHODS: We integrated whole-exome sequencing, single-cell RNA sequencing, and immunofluorescence data of ESCC samples from 24 patients who received neoadjuvant treatment with PD-1 inhibitors plus paclitaxel and platinum-based chemotherapy to identify correlations with therapeutic responses...
January 19, 2024: EBioMedicine
https://read.qxmd.com/read/38234100/analysis-of-clinical-samples-of-pancreatic-cyst-s-lesions-with-a-multi-analyte-bioelectronic-simot-array-benchmarked-against-ultrasensitive-chemiluminescent-immunoassay
#18
JOURNAL ARTICLE
Cecilia Scandurra, Kim Björkström, Mariapia Caputo, Lucia Sarcina, Enrico Genco, Francesco Modena, Fabrizio Antonio Viola, Celestino Brunetti, Zsolt M Kovács-Vajna, Cinzia Di Franco, Lena Haeberle, Piero Larizza, Maria Teresa Mancini, Ronald Österbacka, William Reeves, Gaetano Scamarcio, May Wheeler, Mario Caironi, Eugenio Cantatore, Fabrizio Torricelli, Irene Esposito, Eleonora Macchia, Luisa Torsi
Pancreatic cancer, ranking as the third factor in cancer-related deaths, necessitates enhanced diagnostic measures through early detection. In response, SiMoT-Single-molecule with a large Transistor multiplexing array, achieving a Technology Readiness Level of 5, is proposed for a timely identification of pancreatic cancer precursor cysts and is benchmarked against the commercially available chemiluminescent immunoassay SIMOA (Single molecule array) SP-X System. A cohort of 39 samples, comprising 33 cyst fluids and 6 blood plasma specimens, undergoes detailed examination with both technologies...
January 17, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38215755/engineering-human-pluripotent-stem-cell-lines-to-evade-xenogeneic-transplantation-barriers
#19
JOURNAL ARTICLE
Hannah A Pizzato, Paula Alonso-Guallart, James Woods, Jon P Connelly, Todd A Fehniger, John P Atkinson, Shondra M Pruett-Miller, Frederick J Monsma, Deepta Bhattacharya
Successful allogeneic human pluripotent stem cell (hPSC)-derived therapies must overcome immunological rejection by the recipient. To build reagents to define these barriers, we genetically ablated β2M, TAP1, CIITA, CD74, MICA, and MICB to limit expression of HLA-I, HLA-II, and natural killer (NK) cell activating ligands in hPSCs. Transplantation of these cells that also expressed covalent single chain trimers of Qa1 and H2-Kb to inhibit NK cells and CD55, Crry, and CD59 to inhibit complement deposition led to persistent teratomas in wild-type mice...
December 22, 2023: Stem Cell Reports
https://read.qxmd.com/read/38192172/foxl2-and-nr5a1-induce-human-fibroblasts-into-steroidogenic-ovarian-granulosa-like-cells
#20
JOURNAL ARTICLE
Fan Wen, Yuxi Ding, Mingming Wang, Jing Du, Shen Zhang, Kehkooi Kee
Human granulosa cells in different stages are essential for maintaining normal ovarian function, and granulosa cell defect is the main cause of ovarian dysfunction. To address this problem, it is necessary to induce functional granulosa cells at different stages in vitro. In this study, we established a reprogramming method to induce early- and late-stage granulosa cells with different steroidogenic abilities. We used an AMH-fluorescence-reporter system to screen candidate factors for cellular reprogramming and generated human induced granulosa-like cells (hiGC) by overexpressing FOXL2 and NR5A1...
January 8, 2024: Cell Proliferation
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