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https://www.readbyqxmd.com/read/28813668/subnuclear-relocalization-of-structure-specific-endonucleases-in-response-to-dna-damage
#1
Irene Saugar, Alberto Jiménez-Martín, José Antonio Tercero
Structure-specific endonucleases contribute to the maintenance of genome integrity by cleaving DNA intermediates that need to be resolved for faithful DNA repair, replication, or recombination. Despite advances in the understanding of their function and regulation, it is less clear how these proteins respond to genotoxic stress. Here, we show that the structure-specific endonuclease Mus81-Mms4/EME1 relocalizes to subnuclear foci following DNA damage and colocalizes with the endonucleases Rad1-Rad10 (XPF-ERCC1) and Slx1-Slx4...
August 15, 2017: Cell Reports
https://www.readbyqxmd.com/read/28813597/synthesis-of-4-azido-n-acetylhexosamine-uridine-diphosphate-donors-clickable-glycosaminoglycans
#2
Xing Zhang, Dixy E Green, Victor L Schultz, Lei Lin, Xiaorui Han, Ruitong Wang, Alexander Yaksic, So Young Kim, Paul L DeAngelis, Robert J Linhardt
Unnatural chemically modified, nucleotide sugars, UDP-4-N3-GlcNAc and UDP-4-N3-GalNAc were synthesized for the first time. These unnatural UDP-sugar products were then tested for incorporation into hyaluronan, heparosan or chondroitin using polysaccharide synthases. The UDP-4-N3-GlcNAc served as a chain termination substrate for hyaluronan or heparosan synthases; a single analog was added to the non-reducing end of the sugar chain and no subsequent elongation was detected. Compared to chemical method to introduce azido groups into polysaccharides, this enzymatic technique provided a "green" approach to access regioselectively azide-functionalized GAGs, which would bring better control of the final structure and composition of these macromolecules...
August 16, 2017: Journal of Organic Chemistry
https://www.readbyqxmd.com/read/28813596/molecular-imaging-of-p-glycoprotein-in-chemoresistant-tumors-using-a-dual-modality-pet-fluorescence-probe
#3
Mengzhe Wang, Chengqiong Mao, Hui Wang, Xueying Ling, Zhanhong Wu, Zi-Bo Li, Xin Ming
Overexpression of P-glycoprotein (Pgp) has been considered a primary cause for multidrug resistance in a variety of cancers for three decades. However, clinical translation of Pgp targeted therapeutics has been hindered by lack of patient preselection based on the Pgp presence in tumors. We aim to develop a molecularly targeted probe for imaging tumoral Pgp in vivo with positron emission tomography (PET) and fluorescence, and to provide a tool for preselecting the patients with tumoral Pgp expression. Thus, a Pgp monoclonal antibody 15D3 was chemically modified with IRDye800 (IR800) and DOTA chelator...
August 16, 2017: Molecular Pharmaceutics
https://www.readbyqxmd.com/read/28813518/changes-in-the-incidence-of-pneumonia-bacterial-meningitis-and-infant-mortality-5-years-following-introduction-of-the-13-valent-pneumococcal-conjugate-vaccine-in-a-3-0-schedule
#4
Sylvia Becker-Dreps, Bryan Blette, Rafaela Briceño, Jorge Alemán, Michael G Hudgens, Gilberto Moreno, Ana Ordoñez, Julio Rocha, David J Weber, Erick Amaya
BACKGROUND: Streptococcus pneumoniae causes about 826,000 deaths of children in the world each year and many health facility visits. To reduce the burden of pneumococcal disease, many nations have added pneumococcal conjugate vaccines to their national immunization schedules. Nicaragua was the first country eligible for GAVI Alliance funding to introduce the 13-valent pneumococcal conjugate vaccine (PCV13) in 2010, provided to infants at 2, 4, and 6 months of age. The goal of this study was to evaluate the population impact of the first five years of the program...
2017: PloS One
https://www.readbyqxmd.com/read/28813186/multi-normalization-and-interpolation-protocol-to-improve-norovirus-immunoagglutination-assay-from-paper-microfluidics-with-smartphone-detection
#5
Soohee Cho, Tu San Park, Kelly A Reynolds, Jeong-Yeol Yoon
Norovirus (NoV) is one of the leading causes of acute gastroenteritis, affecting 685 million people per year around the world. The best preventive measure is to screen water for possible NoV contamination, not from infected humans, preferably using rapid and field-deployable diagnostic methods. While enzyme immunoassays (EIAs) can be used for such detection, the low infectious dose as well as the generally inferior sensitivity and low titer of available NoV antibodies render critical challenges in using EIAs toward NoV detection...
August 1, 2017: SLAS Technology
https://www.readbyqxmd.com/read/28813067/total-syntheses-of-smenothiazoles-a-and-b
#6
Xiao Ma, Yajie Chen, Sigui Chen, Zhengshuang Xu, Tao Ye
Concise total syntheses of smenothiazoles A (1) and B (2), two distinguished vinyl chloride containing natural products isolated from the marine sponge S. aurea, have been developed. Silastannation, Stille reaction and a carefully controlled desilylchlorination were employed as key steps to construct unique polyketide acid fragments, and the optimized reaction conditions avoided migration of 2,5-diene to a 2,4-conjugated system. This report unambiguously confirmed the structures of both natural products.
August 16, 2017: Organic & Biomolecular Chemistry
https://www.readbyqxmd.com/read/28813066/multivalent-mesoporous-silica-nanoparticles-photo-delivering-nitric-oxide-with-carbon-dots-as-fluorescence-reporters
#7
Damien Afonso, Sabrina Valetti, Aurore Fraix, Claudia Bascetta, Salvatore Petralia, Sabrina Conoci, Adam Feiler, Salvatore Sortino
Amino-terminated mesoporous silica nanoparticles embedding carbon dots (MSCD) formed by calcination were functionalized with a nitric oxide (NO) photodonor (1) to give a robust MSCD-1 conjugate. The intense fluorescence of MSCDs was strongly quenched in MSCD-1 by effective energy transfer. Visible light excitation of MSCD-1 liberates NO, suppresses the energy transfer mechanism and leads to concomitant fluorescence restoration of the MSCD scaffold, which acts as an optical reporter for the released NO. The MSCD-1 hybrid is also able to encapsulate the highly hydrophobic photosensitizer temoporfin, preserving the fluorescence reporting function...
August 16, 2017: Nanoscale
https://www.readbyqxmd.com/read/28812999/synthesis-and-evaluation-of-a-sodium-alginate-4-aminosalicylic-acid-based-microporous-hydrogel-for-potential-viscosupplementation-for-joint-injuries-and-arthritis-induced-conditions
#8
Dharmesh R Chejara, Mostafa Mabrouk, Pradeep Kumar, Yahya E Choonara, Pierre P D Kondiah, Ravindra V Badhe, Lisa C du Toit, Divya Bijukumar, Viness Pillay
A microporous hydrogel was developed using sodium alginate (alg) and 4-aminosalicylic acid (4-ASA). The synthesized hydrogel was characterized using various analytical techniques such as Fourier transform infrared spectroscopy (FTIR), Carbon-13 nuclear magnetic resonance ((13)C-NMR), X-ray powder diffraction (XRD), scanning electron microscopy (SEM), and differential scanning calorimetry (DSC). Additonal carboxyl and hydroxyl functional groups of 4-ASA provided significant lubrication and stress-triggered sol-gel transition to the conjugated hydrogel...
August 16, 2017: Marine Drugs
https://www.readbyqxmd.com/read/28812878/nanomechanical-imaging-of-the-diffusion-of-fullerene-into-conjugated-polymer
#9
Dong Wang, Ken Nakajima, Feng Liu, Shaowei Shi, Thomas P Russell
The large Young's modulus difference between chemically modified fullerene (PCBM) and a conjugated polymer was used to nanomechanically map the diffusion of PCBM into PTB7, a high efficiency low band gap conjugated polymer. The sharp tip in nanomechanical atomic force microscopy (AFM) ensures a high-resolution nanomechanical characterization of the diffusion front, with the intrinsic benefits of revealing the mechanical properties of the mixtures. Localized structure changes induced by diffusion were investigated by grazing incidence x-ray diffraction methods...
August 16, 2017: ACS Nano
https://www.readbyqxmd.com/read/28812765/rational-design-of-polymeric-core-shell-ratiometric-oxygen-sensing-nanostructures
#10
Aisling Byrne, Jaco Jacobs, Christopher S Burke, Aaron Martin, Andreas Heise, Tia E Keyes
A new approach for the fabrication of luminescent ratiometric sensing nanosensors is described using core-shell nanoparticles in which the probe and reference are spatially separated into the shell and core of the nanostructure respectively. The isolation of the reference in the core of the particle ensures a stable emission reference signal unaffected by the external environment. The core shell structure was prepared by engineering structurally well-defined Ru-conjugated block copolymers which acted as emulsifiers in the miniemulsion polymerisation of BODIPY loaded styrene nanoparticles...
August 16, 2017: Analyst
https://www.readbyqxmd.com/read/28812751/hydrogen-bonded-rosettes-comprising-%C3%AF-conjugated-systems-as-building-blocks-for-functional-one-dimensional-assemblies
#11
Bimalendu Adhikari, Xu Lin, Mitsuaki Yamauchi, Hayato Ouchi, Keisuke Aratsu, Shiki Yagai
Hydrogen-bonded supermacrocycles (rosettes) are attractive disk-shaped noncovalent synthons for extended functional columnar nanoassemblies. They can serve not only as noncovalent monomer units for supramolecular polymers and discrete oligomers in a dilute solution but also as constituent entities for soft matters such as gels and lyotropic/thermotropic liquid crystals. However, what are the merits of using supramolecular rosettes instead of using expanded π-conjugated covalent molecules? This review covers the self-assembly of photochemically and electrochemically active π-conjugated molecules through the formation of supramolecular rosettes via directional complementary multiple hydrogen-bonding interactions...
August 16, 2017: Chemical Communications: Chem Comm
https://www.readbyqxmd.com/read/28812233/synthesis-and-photophysical-study-of-new-green-fluorescent-tpa-based-poly-azomethine-s
#12
Naila Khalid, Asma Iqbal, Humaira Masood Siddiqi, O Ok Park
A series of poly(azomethine)s (PAMs) were synthesized from N(1)-(4-aminophenyl)-N(1)-(4-phenoxyphenyl)benzene-1,4-diamine (DA) and various dialdehydes to investigate the influence of structure of polymer chain and triphenylamine-based phenoxy pendant group on the optoelectronic properties. The structural characterization of the resulting poly(azomethine)s was carried out by solubility test, gel permeation chromatography, viscosity measurement, fourier transform infrared (FTIR) spectral and CHN elemental analysis...
August 15, 2017: Journal of Fluorescence
https://www.readbyqxmd.com/read/28812011/oil-characterization-and-lipids-class-composition-of-pomegranate-seeds
#13
Zahra Amri, Houda Lazreg-Aref, Manel Mekni, Sinda El-Gharbi, Olfa Dabbaghi, Beligh Mechri, Mohamed Hammami
This study aims to investigate the physicochemical characteristics, phenolics content, and oil composition of pomegranate oil seeds (PSO). Quality indices, pigments, phenolics content, and antioxidant activity were determined. PSO was fractioned into polar lipids: glycolipids (GL) and phospholipids (PL). Sterols profile and fatty acids composition of total lipids (TL), GL, and PL were determined by GC/FID. The free acidity, the peroxide value, and the specific extinction coefficients were, respectively, 1.69%, 3...
2017: BioMed Research International
https://www.readbyqxmd.com/read/28811633/rapid-replacement-by-non-vaccine-pneumococcal-serotypes-may-mitigate-the-impact-of-the-pneumococcal-conjugate-vaccine-on-nasopharyngeal-bacterial-ecology
#14
Brenda Kwambana-Adams, Blake Hanson, Archibald Worwui, Schadrac Agbla, Ebenezer Foster-Nyarko, Fatima Ceesay, Chinelo Ebruke, Uzochukwu Egere, Yanjiao Zhou, Maze Ndukum, Erica Sodergren, Michael Barer, Richard Adegbola, George Weinstock, Martin Antonio
There is growing concern that interventions that alter microbial ecology can adversely affect health. We characterised the impact of the seven-valent pneumococcal conjugate vaccine (PCV7) on pneumococcal carriage and the bacterial component of the nasopharyngeal microbiome during infancy. Newborns were recruited into three groups as follows: Group1 (n = 33) was the control group and comprised infants who received PCV7 after 6 months and came from unvaccinated communities. Group 2 (n = 30) came from unvaccinated communities and Group 3 (n = 39) came from vaccinated communities...
August 15, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28811238/i-index-is-not-an-accurate-indicator-of-icteria-in-conjugated-hyperbilirubinemia
#15
Nora Nikolac Gabaj, Marijana Miler, Roman Mihic
INTRODUCTION: Serum indices have become a standard in assessing degree of endogenous interferences in serum and plasma samples. The aim of this study was to evaluate accuracy of I index in comparison with total bilirubin concentration in icteric samples with ranging amount of conjugated bilirubin. MATERIALS AND METHODS: This study retrospectively analyzed data from laboratory information system. Total, conjugated bilirubin and I index are measured on Abbott Architect c8000 (N=900)...
August 12, 2017: Clinica Chimica Acta; International Journal of Clinical Chemistry
https://www.readbyqxmd.com/read/28811102/high-resolution-separations-of-charge-variants-and-disulfide-isomers-of-monoclonal-antibodies-and-antibody-drug-conjugates-using-ultra-high-voltage-capillary-electrophoresis-with-high-electric-field-strength
#16
W Hampton Henley, Yan He, J Scott Mellors, Nicholas G Batz, J Michael Ramsey, James W Jorgenson
Ultra-high voltage capillary electrophoresis with high electric field strength has been applied to the separation of the charge variants, drug conjugates, and disulfide isomers of monoclonal antibodies. Samples composed of many closely related species are difficult to resolve and quantify using traditional analytical instrumentation. High performance instrumentation can often save considerable time and effort otherwise spent on extensive method development. Ideally, the resolution obtained for a given CE buffer system scales with the square root of the applied voltage...
July 29, 2017: Journal of Chromatography. A
https://www.readbyqxmd.com/read/28811027/design-of-carbohydrate-electron-transfer-peptides-for-human-histocytic-lymphoma-cell-sensing
#17
Kazuharu Sugawara, Toshihiko Kadoya, Hideki Kuramitz, Yoshihiro Mihara
A carbohydrate/electro-transfer peptide probe was fabricated to perform cell sensing. The probe consisted of a cello-oligosaccharide that was created by the conjugation of an electron-transfer peptide (Y5C) and a carbohydrate via a Schiff base. An oxidation wave due to a phenolic hydroxyl group was obtained by scanning with a glassy carbon electrode. This cell-sensing system was based on a competitive reaction between carbohydrates on a cell surface and the probe as each reacted to a protein that recognized the carbohydrate...
August 29, 2017: Analytica Chimica Acta
https://www.readbyqxmd.com/read/28811023/agnps-3d-nanostructure-enhanced-electrochemiluminescence-of-cdse-quantum-dot-coupled-with-strand-displacement-amplification-for-sensitive-biosensing-of-dna
#18
Meng Jiao, Guifen Jie, Lu Tan, Shuyan Niu
A novel strategy using Ag nanoparticles-3D (AgNPs-3D) nanostructure enhanced electrochemiluminescence (ECL) of CdSe quantum dots (QDs) coupled with strand displacement amplification (SDA) for sensitive biosensing of DNA was successfully designed. The prepared CdSe QDs with intense ECL were assembled on the poly (diallyldimethylammonium chloride) (PDDA) graphene oxide (GO) nanocomposites modified electrode, then gold nanoparticles (NPs) as the quenching probe was conjugated to the QDs, ECL signal was efficiently quenched...
August 29, 2017: Analytica Chimica Acta
https://www.readbyqxmd.com/read/28810770/electronic-structures-at-the-interface-between-cupc-and-black-phosphorus
#19
Can Wang, Dongmei Niu, Haipeng Xie, Baoxing Liu, Shitan Wang, Menglong Zhu, Yongli Gao
The electronic structure at the organic-inorganic semiconductor interface of π-conjugated copper phthalocyanine (CuPc) on a black phosphorus (BP) crystal surface is studied with photoemission spectroscopy and density functional theory calculations. From the photoemission spectra, we observe a shift of about 0.7 eV for the highest occupied molecular orbital, which originates from the transition of phase in the organic molecular thin film (from the interface phase to the bulk phase). On the other hand, we find 0...
August 14, 2017: Journal of Chemical Physics
https://www.readbyqxmd.com/read/28810739/a-hexa-rhodium-metallopeptide-catalyst-for-site-specific-functionalization-of-natural-antibodies
#20
Jun Ohata, Zachary T Ball
Preparation of antibody-drug conjugates (ADCs), an emerging class of targeted biological hybrid agents, necessitates precise control of conjugation reactivity. Antibodies have complex multi-stranded architectures, and specific modification of natu-ral antibodies has proven quite challenging. Here, we demonstrate that cooperative activity of a multi-metallic metallopeptide enables efficient site-specific antibody functionalization, based on molecular recognition of the constant Fc region. This interplay of multiple metal centers enables introduction of an orthogonal alkyne handle into monoclonal or polyclonal antibodies from different species...
August 16, 2017: Journal of the American Chemical Society
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