keyword
https://read.qxmd.com/read/38147067/respiratory-viruses-in-wastewater-compared-with-clinical-samples-leuven-belgium
#21
JOURNAL ARTICLE
Annabel Rector, Mandy Bloemen, Marijn Thijssen, Bram Pussig, Kurt Beuselinck, Marc Van Ranst, Elke Wollants
In a 2-year study in Leuven, Belgium, we investigated the use of wastewater sampling to assess community spread of respiratory viruses. Comparison with the number of positive clinical samples demonstrated that wastewater data reflected circulation levels of typical seasonal respiratory viruses, such as influenza, respiratory syncytial virus, and enterovirus D68.
January 2024: Emerging Infectious Diseases
https://read.qxmd.com/read/38118274/predicting-the-impact-of-covid-19-non-pharmaceutical-intervention-on-short-and-medium-term-dynamics-of-enterovirus-d68-in-the-us
#22
JOURNAL ARTICLE
Sang Woo Park, Kevin Messacar, Daniel C Douek, Alicen B Spaulding, C Jessica E Metcalf, Bryan T Grenfell
Recent outbreaks of enterovirus D68 (EV-D68) infections, and their causal linkage with acute flaccid myelitis (AFM), continue to pose a serious public health concern. During 2020 and 2021, the dynamics of EV-D68 and other pathogens have been significantly perturbed by non-pharmaceutical interventions against COVID-19; this perturbation presents a powerful natural experiment for exploring the dynamics of these endemic infections. In this study, we analyzed publicly available data on EV-D68 infections, originally collected through the New Vaccine Surveillance Network, to predict their short- and long-term dynamics following the COVID-19 interventions...
December 18, 2023: Epidemics
https://read.qxmd.com/read/38110940/a-novel-mucosal-bivalent-vaccine-of-ev-a71-ev-d68-adjuvanted-with-polysaccharides-from-ganoderma-lucidum-protects-mice-against-ev-a71-and-ev-d68-lethal-challenge
#23
JOURNAL ARTICLE
Yu-Li Lin, Pei-Yun Cheng, Chiao-Li Chin, Kuan-Ting Chuang, Jing-Yi Lin, Ning Chang, Chun-Kei Pan, Cheng-Sheng Lin, Siao-Cian Pan, Bor-Luen Chiang
BACKGROUND: Human enteroviruses A71 (EV-A71) and D68 (EV-D68) are the suspected causative agents of hand-foot-and-mouth disease, aseptic meningitis, encephalitis, acute flaccid myelitis, and acute flaccid paralysis in children. Until now, no cure nor mucosal vaccine existed for EV-A71 and EV-D68. Novel mucosal bivalent vaccines are highly important for preventing EV-A71 and EV-D68 infections. METHODS: In this study, formalin-inactivated EV-A71 and EV-D68 were used as antigens, while PS-G, a polysaccharide from Ganoderma lucidum, was used as an adjuvant...
December 18, 2023: Journal of Biomedical Science
https://read.qxmd.com/read/38047713/differential-inhibition-of-intra-and-inter-molecular-protease-cleavages-by-antiviral-compounds
#24
JOURNAL ARTICLE
Jennifer S Doherty, Karla Kirkegaard
Most protease-targeted antiviral development evaluates the ability of small molecules to inhibit the cleavage of artificial substrates. However, before they can cleave any other substrates, viral proteases need to cleave themselves out of the viral polyprotein in which they have been translated. This can occur either intra- or inter-molecularly. Whether this process occurs intra- or inter-molecularly has implications for the potential for precursors to accumulate and for the effectiveness of antiviral drugs...
December 4, 2023: Journal of Virology
https://read.qxmd.com/read/38047678/identification-of-four-neutralizing-antigenic-sites-on-the-enterovirus-d68-capsid
#25
JOURNAL ARTICLE
Wenlong Dai, Xue Li, Zeyu Liu, Chao Zhang
Enterovirus D68 (EV-D68) is an emerging respiratory pathogen associated with acute flaccid myelitis. Currently, no approved vaccines or antiviral drugs are available. Here, we report four functionally independent neutralizing antigenic sites (I to IV) by analyses of neutralizing monoclonal antibody (MAb)-resistant mutants. Site I is located in the VP1 BC loop near the fivefold axis. Site II resides in the VP2 EF loop, and site III is situated in VP1 C-terminus; both sites are located at the south rim of the canyon...
December 4, 2023: Journal of Virology
https://read.qxmd.com/read/38040125/enterovirus-d68-vrna-induces-type-iii-ifn-production-via-mda5
#26
JOURNAL ARTICLE
Chi-Chong Chio, Hio-Wai Chan, Shih-Hsiang Chen, Hsing-I Huang
Enterovirus D68 (EV-D68) primarily spreads through the respiratory tract and causes respiratory symptoms in children and acute flaccid myelitis (AFM). Type III interferons (IFNs) play a critical role in inhibiting viral growth in respiratory epithelial cells. However, the mechanism by which EV-D68 induces type III IFN production is not yet fully understood. In this study, we show that EV-D68 infection stimulates Calu-3 cells to secrete IFN-λ. The transfection of EV-D68 viral RNA (vRNA) stimulated IFN-λ via MDA5...
November 29, 2023: Virus Research
https://read.qxmd.com/read/37984566/licochalcone-a-regulates-viral-ires-activity-to-inhibit-enterovirus-replication
#27
JOURNAL ARTICLE
Yu-Ting Chuang, Yu-Li Lin, Jing-Yi Lin
Enterovirus D68 (EV-D68), belonging to the genus Enterovirus of the Picornavirus family, is an emerging pathogen that can cause neurological and respiratory diseases in children. However, there is little understanding of the pathogenesis of EV-D68, and no effective vaccine or drug for the prevention or treatment of the diseases caused by this virus is available. Autophagy is a cellular process that targets cytoplasmic proteins or organelles to the lysosomes for degradation. Enteroviruses strategically harness the host autophagy pathway to facilitate the completion of their life cycle...
November 18, 2023: Antiviral Research
https://read.qxmd.com/read/37977075/changes-in-enterovirus-epidemiology-after-easing-of-lockdown-measures
#28
JOURNAL ARTICLE
Erley Lizarazo Forero, Marjolein Knoester, Lilli Gard, Alewijn Ott, Afke H Brandenburg, Matthew B B McCall, Hubert G M Niesters, Coretta Van Leer-Buter
INTRODUCTION: Public health measures aimed at controlling transmission of SARS-CoV-2, otherwise known as "lockdown" measures, had profound effects on circulation of non-SARS viruses, many of which decreased to very low levels.  The interrupted transmission of these viruses may have lasting effects. Some of the influenza clades seem to have disappeared during this period, a phenomenon which is described as a "funnel effect". It is currently unknown if the lockdown measures had any effect on the diversity of circulating viruses, other than influenza...
December 2023: Journal of Clinical Virology
https://read.qxmd.com/read/37977074/clinical-and-molecular-characteristics-of-the-2022-enterovirus-d68-outbreak-among-hospitalized-children-ohio-usa
#29
JOURNAL ARTICLE
Raquel Giacomelli Cao, Asuncion Mejias, Amy L Leber, Huanyu Wang
BACKGROUND: Enterovirus-D68 (EV-D68) has appeared biennially in the United States following the 2014 outbreak. It has gained epidemiologic and clinical relevance and was identified as an important pathogen associated with severe respiratory and central nervous system diseases. We aim to describe the clinical and molecular characteristics of the post-pandemic 2022 Enterovirus-D68 outbreak in children evaluated in a tertiary pediatric hospital in Columbus, Ohio. METHODS: EV-D68 RT-PCR was performed on nasopharyngeal specimens collected during Jun-Nov 2022 from children (<18 years), identified by 1) physician-order or 2) random selection of 10-15 specimens weekly that were Rhinovirus/Enterovirus-positive by physician-ordered respiratory virus panel...
December 2023: Journal of Clinical Virology
https://read.qxmd.com/read/37914757/structure-yeast-%C3%AE-glucosidase-inhibitory-activity-relationship-of-9-o-berberrubine-carboxylates
#30
JOURNAL ARTICLE
Duy Vu Nguyen, Kowit Hengphasatporn, Ade Danova, Aphinya Suroengrit, Siwaporn Boonyasuppayakorn, Ryo Fujiki, Yasuteru Shigeta, Thanyada Rungrotmongkol, Warinthorn Chavasiri
Thirty-five 9-O-berberrubine carboxylate derivatives were synthesized and evaluated for yeast α-glucosidase inhibitory activity. All compounds demonstrated better inhibitory activities than the parent compounds berberine (BBR) and berberrubine (BBRB), and a positive control, acarbose. The structure-activity correlation study indicated that most of the substituents on the benzoate moiety such as methoxy, hydroxy, methylenedioxy, benzyloxy, halogen, trifluoromethyl, nitro and alkyl can contribute to the activities except multi-methoxy, fluoro and cyano...
November 1, 2023: Scientific Reports
https://read.qxmd.com/read/37910158/estimating-prevalence-of-enterovirus-d111-in-human-and-non-human-primate-populations-using-cross-sectional-serology
#31
JOURNAL ARTICLE
Everlyn Kamau, Mael Bessaud, Manasi Majumdar, Javier Martin, Peter Simmonds, Heli Harvala
Enteroviruses primarily affect young children with a varying severity of disease. Recent outbreaks of severe respiratory and neurological disease due to EV-D68 and EV-A71, as well as atypical hand-foot-and-mouth-disease due to CVA6, have brought to light the potency of enteroviruses to emerge as severe human pathogens. Enterovirus D111 (EV-D111) is an enteric pathogen initially detected in Central Africa in human and wildlife samples and was recently detected in environmental samples. The natural history and epidemiology of EV-D111 are poorly studied...
November 2023: Journal of General Virology
https://read.qxmd.com/read/37909766/an-unexpected-ph-sensitive-step-of-the-enterovirus-d68-lifecycle
#32
JOURNAL ARTICLE
David Aponte-Diaz, Matthew R Vogt, Craig E Cameron
Enterovirus D68 (EV-D68) contributes significantly to pathogen-induced respiratory illnesses and severe neurological disorders like acute flaccid myelitis. We lack EV-D68 preventive measures, and knowledge of its molecular and cellular biology is incomplete. Multiple studies have highlighted the role of membrane compartments and autophagy during picornavirus multiplication. Galitska et al. found that EV-D68 also exploits cellular autophagic compartments and relies on autophagic machinery as pro-viral factors (G...
November 1, 2023: MBio
https://read.qxmd.com/read/37877702/comparison-of-metagenomic-and-targeted-methods-for-sequencing-human-pathogenic-viruses-from-wastewater
#33
JOURNAL ARTICLE
Harry T Child, George Airey, Daniel M Maloney, Abby Parker, Jonathan Wild, Suzie McGinley, Nicholas Evens, Jonathan Porter, Kate Templeton, Steve Paterson, Ronny van Aerle, Matthew J Wade, Aaron R Jeffries, Irene Bassano
Wastewater-based epidemiology is a powerful tool for monitoring the emergence and spread of viral pathogens at the population scale. Typical polymerase chain reaction (PCR)-based methods of quantitative and genomic monitoring of viruses in wastewater provide high sensitivity and specificity. However, these methods are limited to the surveillance of target viruses in a single assay and require prior knowledge of the target genome(s). Metagenomic sequencing methods may represent a target-agnostic approach to viral wastewater monitoring, allowing for the detection of a broad range of target viruses, including potentially novel and emerging pathogens...
October 25, 2023: MBio
https://read.qxmd.com/read/37877593/trends-of-enterovirus-d68-concentrations-in-wastewater-california-usa-february-2021-april-2023
#34
JOURNAL ARTICLE
Alexandria B Boehm, Debra A Wadford, Bridgette Hughes, Dorothea Duong, Alice Chen, Tasha Padilla, Chelsea Wright, Lisa Moua, Teal Bullick, Maria Salas, Christina Morales, Bradley J White, Carol A Glaser, Duc J Vugia, Alexander T Yu, Marlene K Wolfe
In this retrospective study, we measured enterovirus D68 (EV-D68) genomic RNA in wastewater solids longitudinally at 2 California, USA, wastewater treatment plants twice per week for 26 months. EV-D68 RNA was undetectable except when concentrations increased from mid-July to mid-December 2022, which coincided with a peak in confirmed EV-D68 cases.
November 2023: Emerging Infectious Diseases
https://read.qxmd.com/read/37877582/duration-of-enterovirus-d68-rna-shedding-in-the-upper-respiratory-tract-and-transmission-among-household-contacts-colorado-usa
#35
JOURNAL ARTICLE
Hai Nguyen-Tran, Careese Thompson, Molly Butler, Kristen R Miller, Laura Pyle, Sarah Jung, Shannon Rogers, Terry Fei Fan Ng, Janell Routh, Samuel R Dominguez, Kevin Messacar
Enterovirus D68 (EV-D68) causes cyclical outbreaks of respiratory disease and acute flaccid myelitis. EV-D68 is primarily transmitted through the respiratory route, but the duration of shedding in the respiratory tract is unknown. We prospectively enrolled 9 hospitalized children with EV-D68 respiratory infection and 16 household contacts to determine EV-D68 RNA shedding dynamics in the upper respiratory tract through serial midturbinate specimen collections and daily symptom diaries. Five (31.3%) household contacts, including 3 adults, were EV-D68-positive...
November 2023: Emerging Infectious Diseases
https://read.qxmd.com/read/37857371/structure-based-lead-optimization-of-enterovirus-d68-2a-protease-inhibitors
#36
JOURNAL ARTICLE
Bin Tan, Chang Liu, Kan Li, Prakash Jadhav, George Lambrinidis, Lan Zhu, Linda Olson, Haozhou Tan, Yu Wen, Antonios Kolocouris, Wei Liu, Jun Wang
Enterovirus D68 (EV-D68) virus is a nonpolio enterovirus that typically causes respiratory illness and, in severe cases, can lead to paralysis and death in children. There is currently no vaccine or antiviral for EV-D68. We previously discovered the viral 2A protease (2Apro ) as a viable antiviral drug target and identified telaprevir as a 2Apro inhibitor. 2Apro is a viral cysteine protease that cleaves the viral VP1-2A polyprotein junction. In this study, we report the X-ray crystal structures of EV-D68 2Apro , wild-type, and the C107A mutant and the structure-based lead optimization of telaprevir...
October 19, 2023: Journal of Medicinal Chemistry
https://read.qxmd.com/read/37852802/in%C3%A2-vitro-and-in%C3%A2-vivo-models-for-the-study-of-ev-d68-infection
#37
REVIEW
Yuan Teng Hooi, Vinod R M T Balasubramaniam
Enterovirus D68 (EV-D68) is one of hundreds of non-polio enteroviruses that typically cause cold-like respiratory illness. The first EV-D68 outbreak in the United States in 2014 aroused widespread concern among the public and health authorities. The infection was found to be associated with increased surveillance of acute flaccid myelitis, a neurological condition that causes limb paralysis in conjunction with spinal cord inflammation. In vitro studies utilising two-dimensional (2D) and three-dimensional (3D) culture systems have been employed to elucidate the pathogenic mechanism of EV-D68...
September 25, 2023: Pathology
https://read.qxmd.com/read/37850626/sirt-1-is-required-for-release-of-enveloped-enteroviruses
#38
JOURNAL ARTICLE
Alagie Jassey, James Logue, Stuart Weston, Michael A Wagner, Ganna Galitska, Katelyn Miller, Matthew Frieman, William T Jackson
Enterovirus D68 (EV-D68) is a re-emerging enterovirus that causes acute respiratory illness in infants and has recently been linked to Acute Flaccid Myelitis. Here, we show that the histone deacetylase, SIRT-1, is essential for autophagy and EV-D68 infection. Knockdown of SIRT-1 inhibits autophagy and reduces EV-D68 extracellular titers. The proviral activity of SIRT-1 does not require its deacetylase activity or functional autophagy. SIRT-1's proviral activity is, we demonstrate, mediated through the repression of endoplasmic reticulum stress (ER stress)...
October 18, 2023: ELife
https://read.qxmd.com/read/37849401/the-picornaviridae-family-knowledge-gaps-animal-models-countermeasures-and-prototype-pathogens
#39
JOURNAL ARTICLE
Raul Andino, Karla Kirkegaard, Andrew Macadam, Vincent R Racaniello, Amy B Rosenfeld
Picornaviruses are nonenveloped particles with a single-stranded RNA genome of positive polarity. This virus family includes poliovirus, hepatitis A virus, rhinoviruses, and Coxsackieviruses. Picornaviruses are common human pathogens, and infection can result in a spectrum of serious illnesses, including acute flaccid myelitis, severe respiratory complications, and hand-foot-mouth disease. Despite research on poliovirus establishing many fundamental principles of RNA virus biology and the first transgenic animal model of disease for infection by a human virus, picornaviruses are understudied...
October 18, 2023: Journal of Infectious Diseases
https://read.qxmd.com/read/37827347/molecular-epidemiology-and-recombination-of-enterovirus-d68-in-china
#40
JOURNAL ARTICLE
Yingying Shi, Yongjuan Liu, Yanli Wu, Song Hu, Binlian Sun
Enterovirus D68 (EV-D68), a member of Enterovirus genus of the Picornaviridae family, mainly causes respiratory system-related diseases as well as neurological complications in some patients. At present, there is no effective vaccine or treatment for the virus. The aim of this research was to systematically analyse the molecular epidemiology, recombination and changes in the epitope of EV-D68 in China from 2008 to 2022. Through phylogenetic analysis based on VP1 sequences, it was found that there was limited information about EV-D68 infection before 2011 and that EV-D68 infection was dominated by the A2 gene subtype from 2011 to 2013 and the B3 genotype from 2014 to 2018, during which A2 and B3 were coprevalent and alternately prevalent...
October 10, 2023: Infection, Genetics and Evolution
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