keyword
https://read.qxmd.com/read/38617346/high-resolution-in-situ-structures-of-mammalian-mitochondrial-respiratory-supercomplexes-in-reaction-within-native-mitochondria
#1
Wan Zheng, Pengxin Chai, Jiapeng Zhu, Kai Zhang
Mitochondria play a pivotal role in ATP energy production through oxidative phosphorylation, which occurs within the inner membrane via a series of respiratory complexes. Despite extensive in-vitro structural studies, revealing the atomic details of their molecular mechanisms in physiological states remains a major challenge, primarily because of the loss of the native environment during purification. Here, we directly image porcine mitochondria using an in-situ cryo-electron microscopy approach. This enables us to determine the structures of various high-order assemblies of respiratory supercomplexes in their native states, achieving up to 1...
April 3, 2024: bioRxiv
https://read.qxmd.com/read/38577949/berberine-inhibits-excessive-autophagy-and-protects-myocardium-against-ischemia-reperfusion-injury-via-the-rhoe-ampk-pathway
#2
JOURNAL ARTICLE
Fajia Hu, Tie Hu, Yamei Qiao, Huang Huang, Zeyu Zhang, Wenxiong Huang, Jichun Liu, Songqing Lai
Several studies have shown that berberine (BBR) is effective in protecting against myocardial ischemia‑reperfusion injury (MI/RI). However, the precise molecular mechanism remains elusive. The present study observed the mechanism and the safeguarding effect of BBR against hypoxia/reoxygenation (H/R) myocardial injury in H9c2 cells. BBR pretreatment significantly improved the decrease of cell viability, P62 protein, Rho Family GTPase 3 (RhoE) protein, ubiquinone subunit B8 protein, ubiquinol‑cytochrome c reductase core protein U, the Bcl‑2‑associated X protein/B‑cell lymphoma 2 ratio, glutathione (GSH) and the GSH/glutathione disulphide (GSSG) ratio induced by H/R, while reducing the increase in lactate dehydrogenase, microtubule‑associated protein 1 light 3 protein, caspase‑3 activity, reactive oxygen species, GSSG and malonaldehyde caused by H/R...
May 2024: International Journal of Molecular Medicine
https://read.qxmd.com/read/38542936/solubilization-of-phospholipid-by-surfactin-leading-to-lipid-nanodisc-and-fibrous-architecture-formation
#3
JOURNAL ARTICLE
Tomohiro Imura, Satohiro Yanagisawa, Yuri Ikeda, Ryodai Moriyama, Kenichi Sakai, Hideki Sakai, Toshiaki Taira
Nanodiscs belong to a category of water-soluble lipid bilayer nanoparticles. In vivo nanodisc platforms are useful for studying isolated membrane proteins in their native lipid environment. Thus, the development of a practical method for nanodisc reconstruction has garnered consider-able research interest. This paper reports the self-assembly of a mixture of bio-derived cyclic peptide, surfactin (SF), and l-α-dimyristoylphosphatidylcholine (DMPC). We found that SF induced the solubilization of DMPC multilamellar vesicles to form their nanodiscs, which was confirmed by size-exclusion chromatography, dynamic light scattering, and transmission electron microscopy analyses...
March 14, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38522532/arsenic-enhanced-plant-growth-in-as-hyperaccumulator-pteris-vittata-metabolomic-investigations-and-molecular-mechanisms
#4
JOURNAL ARTICLE
Yong-He Han, Yi-Xi Li, Xian Chen, Hong Zhang, Yong Zhang, Wei Li, Chen-Jing Liu, Yanshan Chen, Lena Q Ma
The first-known As-hyperaccumulator Pteris vittata is efficient in As uptake and translocation, which can be used for phytoremediation of As-contaminated soils. However, the underlying mechanisms of As-enhanced plant growth are unknown. We used untargeted metabolomics to investigate the potential metabolites and associated metabolic pathways regulating As-enhanced plant growth in P. vittata. After 60 days of growth in an MS-agar medium containing 15 mg kg-1 As, P. vittata biomass was 33-34 % greater than the no-As control...
March 24, 2024: Science of the Total Environment
https://read.qxmd.com/read/38480844/determination-of-internal-controls-for-quantitative-gene-expression-of-spodoptera-litura-under-microbial-pesticide-stress
#5
JOURNAL ARTICLE
Shuang Wu, Yunmi Luo, Zhihong Zeng, Ying Yu, Shicai Zhang, Yan Hu, Lei Chen
Quantitative real-time polymerase chain reaction (qRT-PCR) has become a commonly used method for the quantification of gene expression. However, accurate qRT-PCR analysis requires a valid internal reference for data normalization. To determine the valid reference characterized with low expression variability among Spodoptera litura samples after microbial pesticide treatments, nine housekeeping genes, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), arginine kinase, ubiquitin C, actin-5C (ACT5C), actin, ribosomal protein S13 (RPS13), tubulin, acidic ribosomal protein P0 (RPLP0) and ubiquinol-cytochrome c reductase, were evaluated for their suitability using geNorm, Normfinder, BestKeeper, RefFinder and the comparative delta CT methods in this study...
March 13, 2024: Scientific Reports
https://read.qxmd.com/read/38452275/mitochondria-targeted-prodrug-nanoassemblies-for-efficient-ferroptosis-based-therapy-via-devastating-ferroptosis-defense-systems
#6
JOURNAL ARTICLE
Nian Liu, Qian Lin, Zhenkun Huang, Chen Liu, Jingbo Qin, Yanlin Yu, Weibin Chen, Jingbo Zhang, Min Jiang, Xuemin Gao, Shuaidong Huo, Xuan Zhu
Ferroptosis is a form of regulated cell death accompanied by lipid reactive oxygen species (ROS) accumulation in an iron-dependent manner. However, the efficiency of tumorous ferroptosis was seriously restricted by intracellular ferroptosis defense systems, the glutathione peroxidase 4 (GPX4) system, and the ubiquinol (CoQH2 ) system. Inspired by the crucial role of mitochondria in the ferroptosis process, we reported a prodrug nanoassembly capable of unleashing potent mitochondrial lipid peroxidation and ferroptotic cell death...
March 7, 2024: ACS Nano
https://read.qxmd.com/read/38397087/the-structure-of-the-cardiac-mitochondria-respirasome-is-adapted-for-the-%C3%AE-oxidation-of-fatty-acids
#7
REVIEW
Alexander V Panov
It is well known that in the heart and kidney mitochondria, more than 95% of ATP production is supported by the β-oxidation of long-chain fatty acids. However, the β-oxidation of fatty acids by mitochondria has been studied much less than the substrates formed during the catabolism of carbohydrates and amino acids. In the last few decades, several discoveries have been made that are directly related to fatty acid oxidation. In this review, we made an attempt to re-evaluate the β-oxidation of long-chain fatty acids from the perspectives of new discoveries...
February 18, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38307422/effect-of-ubiquinol-on-electrophysiology-during-high-altitude-acclimatization-and-de-acclimatization-a-substudy-of-the-shigatse-cardiorespiratory-fitness-scarf-randomized-clinical-trial
#8
RANDOMIZED CONTROLLED TRIAL
Zhen Liu, Jie Yang, Bingjie Yang, Mengjia Sun, Xiaowei Ye, Shiyong Yu, Hu Tan, Mingdong Hu, Hailin Lv, Boji Wu, Xubin Gao, Lan Huang
BACKGROUND: High-altitude exposure changes the electrical conduction of the heart. However, reports on electrocardiogram (ECG) characteristics and potent prophylactic agents during high-altitude acclimatization and de-acclimatization are inadequate. This study aimed to investigate the effects of ubiquinol on electrophysiology after high-altitude hypoxia and reoxygenation. METHODS: The study was a prospective, randomized, double-blind, placebo-controlled trial. Forty-one participants were randomly divided into two groups receiving ubiquinol 200 mg daily or placebo orally 14 days before flying to high altitude (3900 m) until the end of the study...
April 15, 2024: International Journal of Cardiology
https://read.qxmd.com/read/38255749/prospects-of-intravenous-coenzyme-q10-administration-in-emergency-ischemic-conditions
#9
REVIEW
Elena I Kalenikova, Evgeniya A Gorodetskaya, Oxana V Povarova, Oleg S Medvedev
Coenzyme CoQ10 (CoQ10) is an endogenous lipid-soluble antioxidant that effectively protects lipids, proteins, and DNA from oxidation due to its ability to undergo redox transitions between oxidized and reduced forms. Various oxidative stress-associated infectious and somatic diseases have been observed to disrupt the balance of CoQ10 concentration in tissues. As a high molecular weight polar lipophilic compound, CoQ10 exhibits very limited oral bioavailability, which restrains its therapeutic potential. Nevertheless, numerous studies have confirmed the clinical efficacy of CoQ10 therapy through oral administration of high doses over extended time periods...
January 17, 2024: Life
https://read.qxmd.com/read/38243131/an-etfdh-driven-metabolon-supports-oxphos-efficiency-in-skeletal-muscle-by-regulating-coenzyme-q-homeostasis
#10
JOURNAL ARTICLE
Juan Cruz Herrero Martín, Beñat Salegi Ansa, Gerardo Álvarez-Rivera, Sonia Domínguez-Zorita, Pilar Rodríguez-Pombo, Belén Pérez, Enrique Calvo, Alberto Paradela, David G Miguez, Alejandro Cifuentes, José M Cuezva, Laura Formentini
Coenzyme Q (Q) is a key lipid electron transporter, but several aspects of its biosynthesis and redox homeostasis remain undefined. Various flavoproteins reduce ubiquinone (oxidized form of Q) to ubiquinol (QH2 ); however, in eukaryotes, only oxidative phosphorylation (OXPHOS) complex III (CIII) oxidizes QH2 to Q. The mechanism of action of CIII is still debated. Herein, we show that the Q reductase electron-transfer flavoprotein dehydrogenase (ETFDH) is essential for CIII activity in skeletal muscle. We identify a complex (comprising ETFDH, CIII and the Q-biosynthesis regulator COQ2) that directs electrons from lipid substrates to the respiratory chain, thereby reducing electron leaks and reactive oxygen species production...
January 19, 2024: Nature metabolism
https://read.qxmd.com/read/38190087/unravelling-the-key-steps-impairing-the-metabolic-state-of-xanthomonas-cells-undergoing-programmed-cell-death
#11
JOURNAL ARTICLE
Jyoti Tripathi, Satyendra Gautam
Programmed cell death (PCD) has been reported in Xanthomonas axonopodis pv. glycines (Xag) wild type earlier and was indirectly shown to be induced by metabolic stress; however, deciphering the key proteins regulating the metabolic stress remained unrevealed. In this study, transcriptomic and proteomic analyses were performed to investigate the prominent pathways, having a role in the induction of metabolic stress in Xag cells undergoing PCD. A comprehensive analysis of transcriptome and proteome data revealed the major involvement of metabolic pathways related to branched chain amino acid degradation, such as acyl-CoA dehydrogenase and energy-yielding, ubiquinol:cytochrome c oxidoreductase complex, in Xag cells undergoing PCD...
January 8, 2024: International Microbiology: the Official Journal of the Spanish Society for Microbiology
https://read.qxmd.com/read/38181883/discovery-of-novel-diagnostic-biomarkers-for-sj%C3%A3-gren-larsson-syndrome-by-untargeted-lipidomics
#12
JOURNAL ARTICLE
Frédéric M Vaz, Pippa Staps, Jan Bert van Klinken, Henk van Lenthe, Martin Vervaart, Ronald J A Wanders, Mia L Pras-Raves, Michel van Weeghel, Gajja S Salomons, Sacha Ferdinandusse, Ron A Wevers, Michèl A A P Willemsen
AIM: Sjögren-Larsson syndrome (SLS) is a rare neurometabolic disorder that mainly affects brain, eye and skin and is caused by deficiency of fatty aldehyde dehydrogenase. Our recent finding of a profoundly disturbed brain tissue lipidome in SLS prompted us to search for similar biomarkers in plasma as no functional test in blood is available for SLS. METHODS AND RESULTS: We performed plasma lipidomics and used a newly developed bioinformatics tool to mine the untargeted part of the SLS plasma and brain lipidome to search for SLS biomarkers...
March 2024: Biochimica et Biophysica Acta. Molecular and Cell Biology of Lipids
https://read.qxmd.com/read/38168585/multiomic-analysis-in-fibroblasts-of-patients-with-inborn-errors-of-cobalmin-metabolism-reveals-concordance-with-clinical-and-metabolic-variability
#13
JOURNAL ARTICLE
Arnaud Wiedemann, Abderrahim Oussalah, Rosa-Maria Guéant Rodriguez, Elise Jeannesson, Marc Mertens, Irina Rotaru, Jean-Marc Alberto, Okan Baspinar, Charif Rashka, Ziad Hassan, Youssef Siblini, Karim Matmat, Manon Jeandel, Celine Chery, Aurélie Robert, Guillaume Chevreux, Laurent Lignières, Jean-Michel Camadro, François Feillet, David Coelho, Jean-Louis Guéant
BACKGROUND: The high variability in clinical and metabolic presentations of inborn errors of cobalamin (cbl) metabolism (IECM), such as the cblC/epicblC types with combined deficits in methylmalonyl-coA mutase (MUT) and methionine synthase (MS), are not well understood. They could be explained by the impaired expression/activity of enzymes from other metabolic pathways. METHODS: We performed metabolomic, genomic, proteomic, and post-translational modification (PTM) analyses in fibroblasts from three cblC cases and one epi-cblC case compared with three cblG cases with specific MS deficits and control fibroblasts...
January 1, 2024: EBioMedicine
https://read.qxmd.com/read/38156666/comparative-metatranscriptomics-reveals-effect-of-host-plant-on-microbiota-gene-expression-of-anastrepha-obliqua-diptera-tephritidae-larvae
#14
JOURNAL ARTICLE
Valentina Cárdenas-Hernández, César Alejandro Lemos-Lucumí, Nelson Toro-Perea
The microbiota associated with phytophagous insects perform several functions that help insects exploit plant resources. Thus, microorganisms contribute to the dispersal of phytophagous species to new host plants, thereby promoting diversification. In this study, metatranscriptomic analysis was used to compare the gene expression of the microbiome of Anastrepha obliqua Macquart larvae feeding on 3 of its host plants: Spondias purpurea L (red mombin), Mangifera indica L (mango), and Averrhoa carambola L (starfruit)...
December 29, 2023: Environmental Entomology
https://read.qxmd.com/read/38151557/ubiquinol-attenuates-%C3%AE-radiation-induced-coronary-and-aortic-changes-via-pdgf-p38-mapk-icam-1-related-pathway
#15
JOURNAL ARTICLE
Walaa A El-Sabbagh, Noha A Fadel, Rania M El-Hazek, Ahmed H Osman, Laila A Ramadan
Endothelial vascular injury is one of the most pivotal disorders emerging during radiotherapy. It is crucial to rely on strong antioxidants to defend against vascular damage. The current study was carried out to investigate the ameliorative effect of ubiquinol (Ubq) against gamma (γ)-radiation induced aortic and coronary changes, with highlighting its role in suppression of p38 mitogen activated protein kinase (MAPK). Exposure to γ-radiation was adopted as a potent detrimental model that induces vascular tissue damage...
December 27, 2023: Scientific Reports
https://read.qxmd.com/read/38096056/ferroptosis-protective-membrane-domains-in-quiescence
#16
JOURNAL ARTICLE
Amalia H Megarioti, Bianca M Esch, Alexandros Athanasopoulos, Dimitrios Koulouris, Manousos Makridakis, Vasiliki Lygirou, Martina Samiotaki, Jerome Zoidakis, Vicky Sophianopoulou, Bruno André, Florian Fröhlich, Christos Gournas
Quiescence is a common cellular state, required for stem cell maintenance and microorganismal survival under stress conditions or starvation. However, the mechanisms promoting quiescence maintenance remain poorly known. Plasma membrane components segregate into distinct microdomains, yet the role of this compartmentalization in quiescence remains unexplored. Here, we show that flavodoxin-like proteins (FLPs), ubiquinone reductases of the yeast eisosome membrane compartment, protect quiescent cells from lipid peroxidation and ferroptosis...
December 12, 2023: Cell Reports
https://read.qxmd.com/read/38062962/-cytochrome-bd-as-antioxidant-redox-enzyme
#17
JOURNAL ARTICLE
V B Borisov, M R Nastasi, E Forte
One of the main functions of enzyme complexes that constitute electron transport (respiratory) chains of organisms is to maintain cellular redox homeostasis by oxidizing reducing equivalents, NADH and quinol. Cytochrome bd is a unique terminal oxidase of the chains of many bacteria including pathogenic species. This redox enzyme couples the oxidation of ubiquinol or menaquinol by molecular oxygen to the generation of proton motive force, a universal energy currency. The latter is used by the organism to produce ATP, another cellular energy currency, via oxidative phosphorylation...
2023: Molekuliarnaia Biologiia
https://read.qxmd.com/read/38049915/strategies-of-chemolithoautotrophs-adapting-to-high-temperature-and-extremely-acidic-conditions-in-a-shallow-hydrothermal-ecosystem
#18
JOURNAL ARTICLE
Wenchao Deng, Zihao Zhao, Yufang Li, Rongguang Cao, Mingming Chen, Kai Tang, Deli Wang, Wei Fan, Anyi Hu, Guangcheng Chen, Chen-Tung Arthur Chen, Yao Zhang
BACKGROUND: Active hydrothermal vents create extreme conditions characterized by high temperatures, low pH levels, and elevated concentrations of heavy metals and other trace elements. These conditions support unique ecosystems where chemolithoautotrophs serve as primary producers. The steep temperature and pH gradients from the vent mouth to its periphery provide a wide range of microhabitats for these specialized microorganisms. However, their metabolic functions, adaptations in response to these gradients, and coping mechanisms under extreme conditions remain areas of limited knowledge...
December 5, 2023: Microbiome
https://read.qxmd.com/read/37984314/rare-variant-analysis-of-uqcrc1-in-chinese-patients-with-early-onset-parkinson-s-disease
#19
JOURNAL ARTICLE
Shichan Wang, Xiaoting Zheng, Ruwei Ou, Qianqian Wei, Junyu Lin, Tianmi Yang, Yi Xiao, Qirui Jiang, Chunyu Li, Huifang Shang
Mitochondrial ubiquinol-cytochrome c reductase core protein 1 (UQCRC1) gene has been identified as a causative gene for autosomal dominant Parkinson's disease (PD), with the p.Y314S variant potentially associated with polyneuropathy in PD patients. The objectives of our study were to screen for UQCRC1 variants in Chinese patients with early-onset PD (EOPD) and explore the role of UQCRC1 in EOPD. We investigated the rare variants in 913 EOPD patients in our cohort using whole-exome sequencing, assessing their link to PD at both allele and gene levels...
September 20, 2023: Neurobiology of Aging
https://read.qxmd.com/read/37971634/comparison-of-coenzyme-q10-ubiquinone-and-reduced-coenzyme-q10-ubiquinol-as-supplement-to-prevent-cardiovascular-disease-and-reduce-cardiovascular-mortality
#20
REVIEW
Johannes-Paul Fladerer, Selina Grollitsch
PURPOSE OF REVIEW: According to the World Health Organization (WHO), cardiovascular disease is the leading cause of death worldwide. Heart failure has been defined as a global pandemic leading to millions of deaths. Recent research clearly approved the beneficial effect of Coenzyme Q10 supplementation in treatment and prevention of cardiovascular disease in patients with heart failure in clinical trials but did not distinguish between the oxidised form CoQ10 and reduced form CoQH2 of Coenzyme Q10...
December 2023: Current Cardiology Reports
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