keyword
https://read.qxmd.com/read/38662140/degradation-of-pretilachlor-and-fenclorim-and-effects-of-these-compounds-on-bacterial-communities-under-anaerobic-condition
#1
JOURNAL ARTICLE
Ha Danh Duc, Nguyen Thi Oanh, Nguyen Thi Dieu Thuy, Nguyen Thi Kim Xuan
Pretilachlor and safener fenclorim are the main components of herbicides widely applied to control weeds. Although some pure cultures of bacteria and fungi which degraded these compounds under aerobic conditions were isolated, no isolated pretilachlor- and fenclorim-degrading bacterial strains under anaerobic condition had been available. In this study, the degradation of these compounds and the effects of them on bacterial community structures were investigated under anaerobic conditions. The dissipation rates of pretilachlor and fenclorim in slurries were in the order: soil from paddy field ≈ sediment from river > sediment from mangrove...
April 25, 2024: Biodegradation
https://read.qxmd.com/read/38639850/molecular-epidemiological-and-clinical-infection-characteristics-analysis-of-ralstonia
#2
JOURNAL ARTICLE
Zhaojun Sheng, Jiaxin Li, Guojing Han, Ru Fan, Pingjun Zhu, Xiangqun Fang
PURPOSE: This study was to clarify the molecular epidemiology and clinical infection characteristics of Ralstonia pickettii and establish sequence typing system. METHODS: 48 nonrepetitive Ralstonia pickettii strains were collected from January 2008 to December 2013 at the Chinese People's Liberation Army General Hospital (PLAGH) and were identified through a specific PCR experiment, 16 S rDNA experiment and VITEK 2 system to compare the identification accuracy...
April 19, 2024: European Journal of Clinical Microbiology & Infectious Diseases
https://read.qxmd.com/read/38636860/seasonal-variations-of-profiles-of-antibiotic-resistance-genes-and-virulence-factor-genes-in-household-dust-from-beijing-china-revealed-by-the-metagenomics
#3
JOURNAL ARTICLE
Zhi-Zi Zhou, Jasmine Zhu, Yue Yin, Long-Jun Ding
Household-related microbiome is closely related with human health. However, the knowledge about profiles of antibiotic resistance genes (ARGs) and virulence factor genes (VFGs) which are carried by microbes inside homes and their temporal dynamics are rather limited. Here we monitored the seasonal changes of bacterial community (especially pathogenic bacteria), ARGs, and VFGs in household dust samples during two years. Based on metagenomic sequencing, the dust-related bacterial pathogenic community, ARGs, and VFGs all harbored the lowest richness in spring among four seasons...
April 16, 2024: Science of the Total Environment
https://read.qxmd.com/read/38584711/a-large-multicenter-ralstonia-pickettii-outbreak-in-critically-ill-patients-during-the-covid-19-pandemic-epidemiological-and-clinical-characteristics-of-66-cases
#4
JOURNAL ARTICLE
Erika Viana-Cárdenas, Abel Triana, Jorge Cárdenas-Álvarez, Edwin Carvajal-Diaz, Humberto Mendoza, Diego Viasus
OBJECTIVE: To describe a multicenter outbreak of R . pickettii that occurred in a large number of critically ill patients in a city in Colombia, during the COVID-19 pandemic. METHODS: In April 2021, the National Institute for Food and Drug Surveillance (INVIMA) reported an outbreak of R . pickettii infection associated with contaminated intravenous medications. The Municipal Health Department began collecting data for all cases identified by the hospitals and the results of microbiological studies...
May 2024: Journal of Infection Prevention
https://read.qxmd.com/read/38533018/anionic-dye-removal-by-immobilized-bacteria-into-alginate-polyvinyl-alcohol-bentonite-matrix
#5
JOURNAL ARTICLE
Adi Setyo Purnomo, Frida Wahyu Hairunnisa, Misdar, Virda Putri Maria, Alya Awinatul Rohmah, Surya Rosa Putra, Herdayanto Sulistyo Putro, Hamdan Dwi Rizqi
Methyl orange (MO) is commonly used in the textile dyeing industry, posing serious health and environmental hazards due to its carcinogenic, mutagenic properties, and potential for bioaccumulation. Appropriate handling is needed to solve these problems by harnessing the capacity of living microorganisms and the adsorption properties of bentonite clay minerals. Although the conventional approach predominantly depends on free cells, recent study has developed other methods such as immobilization techniques. Therefore, this study aimed to investigate the efficiency of the immobilization matrix comprising sodium alginate (SA), polyvinyl alcohol (PVA), and bentonite by modifying Pseudomonas aeruginosa , Bacillus subtilis , and Ralstonia pickettii for MO removal of 50 mg/L...
March 30, 2024: Heliyon
https://read.qxmd.com/read/38500029/persistent-bacteremia-caused-by-ralstonia-pickettii-and-microbacterium-a-case-report
#6
JOURNAL ARTICLE
Jinwen Wang, Yu Song, Siqin Liu, Xudong Jang, Lina Zhang
BACKGROUND: Ralstonia pickettii is a low virulent, gram-negative bacillus that is rarely associated with human infections and may cause bacteremia. Microbacterium species are gram-positive coryneforms that are generally considered as a contaminant in Gram staining of blood cultures, especially when the time to positivity is longer than 48 h. Both these bacterial species are emerging opportunistic pathogens that may occasionally cause serious infections and even life-threatening health conditions...
March 18, 2024: BMC Infectious Diseases
https://read.qxmd.com/read/38298270/-ralstonia-pickettii-bloodstream-infection-in-the-patient-with-guillain-barre-syndrome-under-plasmapheresis
#7
JOURNAL ARTICLE
Farhad Moradi, Mahrokh Rajaee Behbahani, Javid Gorginpour, Asiyeh Dezhkam, Nahal Hadi
Ralstonia pickettii is a rare Gram-negative opportunistic bacterium that causes rare infections such as bacteremia, neonatal sepsis, endocarditis, and meningitis in hospitalized or immunocompromised patients. In this study, we identified and reported bloodstream infection caused by R. pickettii in a 15 -year-old boy patient with an autoimmune disease, Guillain-Barré syndrome, under plasmapheresis and intravenous immune globulin (IVIG) therapy. He was referred for admission to the neurology center of the teaching hospital of Shiraz, Iran for inability to walk, and lower extremity muscle weakness...
March 2024: New Microbes and New Infections
https://read.qxmd.com/read/38240062/-ralstonia-pickettii-bloodstream-infections-with-potential-genomic-link-to-internationally-distributed-contaminated-saline-solution-germany-october-2023
#8
JOURNAL ARTICLE
Manuel Krone, Vera Rauschenberger, Vera Blaschke, Heike Claus, Oliver Kurzai, Stefanie Kampmeier
Ralstonia pickettii is a Gram-negative rod which may cause invasive infections when they contaminate liquid medical products. After R. pickettii was detected in blood cultures and a stem cell product from three patients in a tertiary care hospital in Germany, whole genome sequencing of these three isolates and two water isolates from the environment was performed. Core genome multilocus sequence typing analysis showed that the three patient isolates were closely related and there was a large distance to the environmental isolates...
January 2024: Euro Surveillance
https://read.qxmd.com/read/38125568/diversity-and-correlation-analysis-of-different-root-exudates-on-the-regulation-of-microbial-structure-and-function-in-soil-planted-with-panax-notoginseng
#9
JOURNAL ARTICLE
Huineng Shi, Jianli Yang, Qi Li, Cier PinChu, Zhanhua Song, Honglei Yang, Yu Luo, Chunlan Liu, Wei Fan
INTRODUCTION: Specific interactions between root exudates and soil microorganisms has been proposed as one of the reasons accounting for the continuous cropping obstacle (CCO) of Panax notoginseng . However, rotation of other crops on soils planted with P. notoginseng (SPP) did not show CCO, suggesting that root exudates of different crops differentially regulate soil microorganisms in SPP. METHODS: Here, we investigated the microbial community structure and specific interaction mechanisms of the root exudates of the four plant species, P...
2023: Frontiers in Microbiology
https://read.qxmd.com/read/38029253/-mycobacterium-tuberculosis-rv1987-protein-attenuates-inflammatory-response-and-consequently-alters-microbiota-in-mouse-lung
#10
JOURNAL ARTICLE
Yingying Liu, Jiaqi Zhang, Guangxian Leng, Junxing Hu, Wenzhen Wang, Guoying Deng, Yufang Ma, Shanshan Sha
INTRODUCTION: Healthy lung microbiota plays an important role in preventing Mycobacterium tuberculosis (Mtb) infections by activating immune cells and stimulating production of T-helper cell type 1 cytokines. The dynamic stability of lung microbiota relies mostly on lung homeostasis. In our previous studies, we found that Mtb virulence factor, Rv1987 protein, can mediate host immune response and enhance mycobacterial survival in host lung. However, the alteration of lung microbiota and the contribution of lung microbiota dysbiosis to mycobacterial evasion in this process are not clear so far...
2023: Frontiers in Cellular and Infection Microbiology
https://read.qxmd.com/read/37935916/prevalence-and-transmission-risk-of-colistin-and-multidrug-resistance-in-long-distance-coastal-aquaculture
#11
JOURNAL ARTICLE
Taicheng An, Yiwei Cai, Guiying Li, Shaoting Li, Po Keung Wong, Jianhua Guo, Huijun Zhao
Due to the wide use of antibiotics, intensive aquaculture farms have been recognized as a significant reservoir of antibiotic resistomes. Although the prevalence of colistin resistance genes and multidrug-resistant bacteria (MDRB) has been documented, empirical evidence for the transmission of colistin and multidrug resistance between bacterial communities in aquaculture farms through horizontal gene transfer (HGT) is lacking. Here, we report the prevalence and transmission risk of colistin and multidrug resistance in 27 aquaculture water samples from 9 aquaculture zones from over 5000 km of subtropical coastlines in southern China...
November 7, 2023: ISME Commun
https://read.qxmd.com/read/37887048/bioinformatic-analysis-reveals-the-role-of-translation-elongation-efficiency-optimisation-in-the-evolution-of-ralstonia-genus
#12
JOURNAL ARTICLE
Aleksandra Y Korenskaia, Yury G Matushkin, Zakhar S Mustafin, Sergey A Lashin, Alexandra I Klimenko
Translation efficiency modulates gene expression in prokaryotes. The comparative analysis of translation elongation efficiency characteristics of Ralstonia genus bacteria genomes revealed that these characteristics diverge in accordance with the phylogeny of Ralstonia . The first branch of this genus is a group of bacteria commonly found in moist environments such as soil and water that includes the species R. mannitolilytica , R. insidiosa , and R. pickettii , which are also described as nosocomial infection pathogens...
October 16, 2023: Biology
https://read.qxmd.com/read/37827107/bacterial-pathogens-associated-with-the-plastisphere-of-surgical-face-masks-and-their-dispersion-potential-in-the-coastal-marine-environment
#13
JOURNAL ARTICLE
Jingguang Cheng, Pu Wang, Jean-François Ghiglione, Lu Liu, Zhonghua Cai, Jin Zhou, Xiaoshan Zhu
Huge numbers of face masks (FMs) were discharged into the ocean during the coronavirus pandemic. These polymer-based artificial surfaces can support the growth of specific bacterial assemblages, pathogens being of particular concern. However, the potential risks from FM-associated pathogens in the marine environment remain poorly understood. Here, FMs were deployed in coastal seawater for two months. PacBio circular consensus sequencing of the full-length 16S rRNA was used for pathogen identification, providing enhanced taxonomic resolution...
October 7, 2023: Journal of Hazardous Materials
https://read.qxmd.com/read/37764154/microbial-detection-and-quantification-of-low-biomass-water-samples-using-an-international-space-station-smart-sample-concentrator
#14
JOURNAL ARTICLE
Adriana Blachowicz, Camilla Urbaniak, Alec Adolphson, Gwyn Isenhouer, Andy Page, Kasthuri Venkateswaran
The pressing need to safeguard the health of astronauts aboard the International Space Station (ISS) necessitates constant and rigorous microbial monitoring. Recognizing the shortcomings of traditional culture-based methods, NASA is deliberating the incorporation of molecular-based techniques. The challenge, however, lies in developing and validating effective methods for concentrating samples to facilitate this transition. This study is dedicated to investigating the potential of an ISS Smart Sample Concentrator (iSSC) as an innovative concentration method...
September 13, 2023: Microorganisms
https://read.qxmd.com/read/37692387/2brad-m-reveals-the-difference-in-microbial-distribution-between-cancerous-and-benign-ovarian-tissues
#15
JOURNAL ARTICLE
Xiaogang Wang, Yaojun Zheng, Xiang Chen, Chen Peng, Shizhen Zhou, Sunan Shen, Shuli Zhao, Tingting Wang
The development of ovarian cancer is closely related to various factors, such as environmental, genetic and microbiological factors. In previous research, bacteria were identified in human tumors by 16S rRNA sequencing. However, the microbial biomass in tumor tissue is too low and cannot be accurately identified by 16S rRNA sequencing. In our study, we employ 2bRAD sequencing for Microbiome (2bRAD-M), a new sequencing technology capable of accurately characterizing the low biomass microbiome (bacteria, fungi and archaea) at species resolution...
2023: Frontiers in Microbiology
https://read.qxmd.com/read/37519755/the-effect-of-bacteria-addition-on-ddt-biodegradation-by-brown-rot-fungus-gloeophyllum-trabeum
#16
JOURNAL ARTICLE
Hamdan Dwi Rizqi, Adi Setyo Purnomo, Aulia Ulfi
DDT (1,1,1-trichloro-2,2 bis(4-chlorophenyl) ethane) is a synthetic insecticide that has several negative effects on the environment and humans. Therefore, determining an effective method to reduce DDT may give a beneficial impact. Brown-rot fungus, Gloeophyllum trabeum , is well known to have the ability to degrade DDT, even though it might require long-term remediation. In this study, the effect of the addition of bacteria on the biodegradation of DDT by G. trabeum had been investigated. Bacillus subtilis , Pseudomonas aeruginosa, and Ralstonia pickettii were screened for the bacteria which the volume of bacteria at 1, 3, 5, and 10 mL and the time range of addition of bacteria on days 0, 1, 3, and 5...
July 2023: Heliyon
https://read.qxmd.com/read/37456549/the-application-of-biosurfactant-producing-bacteria-immobilized-in-pva-sa-bentonite-bio-composite-for-hydrocarbon-contaminated-soil-bioremediation
#17
JOURNAL ARTICLE
Adi Setyo Purnomo, Surya Rosa Putra, Herdayanto Sulistyo Putro, Afan Hamzah, Nova Ainur Rohma, Alya Awinatul Rohmah, Hamdan Dwi Rizqi, Asranudin, Bieby Voijant Tangahu, I D A A Warmadewanthi, Kuniyoshi Shimizu
Oil spills that contaminate the environment can harm the surrounding ecosystem. The oil contains petroleum hydrocarbon which is toxic to the environment hence it needs to be removed. The use of bacteria as remediation media was modified by immobilizing into a matrix hence the bacteria can survive in harsh conditions. In this research, the ability of biosurfactant-producing bacteria ( Pseudomonas aeruginosa , Bacillus subtilis , and Ralstonia pickettii ) immobilized in the PVA/SA/bentonite matrix was tested in remediation on oil-contaminated soil...
July 12, 2023: RSC Advances
https://read.qxmd.com/read/37385452/bacterial-contamination-of-water-used-as-thermal-transfer-fluid-in-fluid-warming-devices
#18
JOURNAL ARTICLE
M Schnetzinger, F Heger, A Indra, O Kimberger
INTRODUCTION: Recent reports implied heater-cooler units (HCU), which are used for warming of infusions, blood or in ECMO devices, as possible origin of healthcare-associated infections (HAIs) with potentially pathogenic bacteria like nontuberculous mycobacteria [1]. This represents a source of contamination in a usually sterile setting. Aim of this study is to analyse water from infusion heating devices (IHDs) for bacterial contamination and to raise the question if IHDs act as a possible source in the transmission of HAIs...
June 27, 2023: Journal of Hospital Infection
https://read.qxmd.com/read/37351184/the-bladder-microbiome-of-nmibc-and-mibc-patients-revealed-by-2brad-m
#19
JOURNAL ARTICLE
Jian-Xuan Sun, Qi-Dong Xia, Xing-Yu Zhong, Zheng Liu, Shao-Gang Wang
BACKGROUND: Bladder cancer (BCa) is the most common malignancy of the urinary tract which can be divided into non-muscle-invasive bladder cancer (NMIBC) and muscle-invasive bladder cancer (MIBC), and their microbial differences are not fully understood. This study was conducted by performing 2bRAD sequencing for Microbiome (2bRAD-M) on NMIBC and MIBC tissue samples to investigate the microbiota differences between NMIBC and MIBC individuals. METHODS: A total of 22 patients with BCa, including 7 NMIBC and 15 MIBC, were recruited...
2023: Frontiers in Cellular and Infection Microbiology
https://read.qxmd.com/read/37342731/emergence-of-multidrug-resistant-non-fermenting-gram-negative-bacilli-in-a-tertiary-care-teaching-hospital-of-central-india-is-colistin-resistance-still-a-distant-threat
#20
JOURNAL ARTICLE
Mitisha Soni, Garima Kapoor, Nagaraj Perumal, Deepti Chaurasia
Purpose Multidrug-resistant (MDR) organisms are being increasingly reported from India. This study aimed to determine the antibiotic susceptibility pattern of non-fermenting Gram-negative bacilli (NF-GNB) isolated from all the clinical samples to estimate the prevalence of MDR MDR NF-GNB and to screen for colistin-resistance genes among all colistin-resistant strains. Materials and methods This prospective study conducted from January 2021 to July 2022 at a tertiary care teaching hospital in central India identified MDR NF-GNB from clinical samples using standard procedures and antimicrobial susceptibility testing conducted as per Clinical Laboratory Standards Institute (CLSI) guidelines...
May 2023: Curēus
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