keyword
https://read.qxmd.com/read/38570683/structural-basis-of-integrator-dependent-rna-polymerase-ii-termination
#21
JOURNAL ARTICLE
Isaac Fianu, Moritz Ochmann, James L Walshe, Olexandr Dybkov, Joseph Neos Cruz, Henning Urlaub, Patrick Cramer
The Integrator complex can terminate RNA polymerase II (Pol II) in the promoter-proximal region of genes. Previous work has shed light on how Integrator binds to the paused elongation complex consisting of Pol II, the DRB sensitivity-inducing factor (DSIF) and the negative elongation factor (NELF) and how it cleaves the nascent RNA transcript1 , but has not explained how Integrator removes Pol II from the DNA template. Here we present three cryo-electron microscopy structures of the complete Integrator-PP2A complex in different functional states...
April 3, 2024: Nature
https://read.qxmd.com/read/38563526/use-of-point-of-care-ultrasound-to-assess-the-severity-of-scorpion-stings-in-hospitalized-patients
#22
JOURNAL ARTICLE
Juliana Sartorelo Almeida, Cecilia Gomez Ravetti, Marcus Vinícius de Melo Andrade, Adebal de Andrade Filho, Rafael Silva E Castro, Pedro Pires Costa Pimenta, Paula Frizera Vassallo, Vandack Nobre
INTRODUCTION: Scorpionism is a public health problem, especially in tropical regions. In Brazil, the prevalence of envenomation by scorpions is high, and the average national lethality is around 0.16 percent. The Tityus serrulatus scorpion is the primary species of medical importance. However, objective tools to predict and define the severity of these envenomations are lacking. MATERIALS AND METHODS: This was an observational study conducted among patients aged 0-19 years with scorpionism...
April 2, 2024: Clinical Toxicology
https://read.qxmd.com/read/38563123/the-scorpion-toxin-bekm-1-blocks-herg-cardiac-potassium-channels-using-an-indispensable-arginine-residue
#23
JOURNAL ARTICLE
Iana I Zavarzina, Alexey I Kuzmenkov, Nikita A Dobrokhotov, Ekaterina E Maleeva, Yuliya V Korolkova, Steve Peigneur, Jan Tytgat, Nikolay A Krylov, Alexander A Vassilevski, Anton O Chugunov
BeKm-1 is a peptide toxin from scorpion venom that blocks the pore of the potassium channel hERG (Kv 11.1) in the human heart. Although individual protein structures have been resolved, the structure of the complex between hERG and BeKm-1 is unknown. Here, we used molecular dynamics and ensemble docking, guided by previous double-mutant cycle analysis data, to obtain an in silico model of the hERG-BeKm-1 complex. Adding to the previous mutagenesis study of BeKm-1, our model uncovers the key role of residue Arg20, which forms three interactions (a salt bridge and hydrogen bonds) with the channel vestibule simultaneously...
April 2, 2024: FEBS Letters
https://read.qxmd.com/read/38554440/f1-fraction-isolated-from-mesobuthus-eupeus-scorpion-venom-induces-macrophage-polarization-toward-m1-phenotype-and-exerts-anti-tumoral-effects-on-the-ct26-tumor-cell-line
#24
JOURNAL ARTICLE
Mahvash Sadeghi, Afshin Amari, Ali Asadirad, Mohammad Nemati, Ali Khodadadi
Scorpion venoms identified as agents with anti-tumor and anti-angiogenic features. Tumor microenvironment (TME) plays a pivotal role in the process of tumorigenesis, tumor development, and polarization of M2 phenotype tumor associated macrophages (TAMs). M2 polarized cells are associated with tumor growth, invasion, and metastasis. The fractionation process was performed by gel filtration chromatography on a Sephadex G50 column. To elucidate whether scorpion venom can alter macrophage polarization, we treated interleukin (IL)-4-polarized M2 cells with isolated fractions from Mesobuthus eupeus...
March 29, 2024: International Immunopharmacology
https://read.qxmd.com/read/38554285/first-biochemical-and-behavioural-analysis-of-the-response-of-the-scorpion-urophonius-brachycentrus-thorell-1876-upon-exposure-to-an-organophosphate
#25
JOURNAL ARTICLE
Carlos F Garcia, Andrés Ojanguren, Analía Seoane, Hernan Iuri, Rocio Gambaro, Gabriel Molina, Aldana Laino
Scorpionism is an increasing public health problem in the world. Although no specific methodology or product is currently available for the control of those arachnids, the use of insecticides could be an effective tool. Chlorpyrifos is one of the insecticides used, but to date, whether scorpions recognise surfaces with that insecticide and how it affects their physiology and/or biochemistry is unknown. In the present study, we observed that scorpions recognise surfaces with 0.51 and 8.59 μg/cm2 of chlorpyrifos and avoid those areas...
March 30, 2024: Medical and Veterinary Entomology
https://read.qxmd.com/read/38535822/cationicity-enhancement-on-the-hydrophilic-face-of-ctriporin-significantly-reduces-its-hemolytic-activity-and-improves-the-antimicrobial-activity-against-antibiotic-resistant-eskape-pathogens
#26
JOURNAL ARTICLE
Xudong Luo, Huan Deng, Li Ding, Xiangdong Ye, Fang Sun, Chenhu Qin, Zongyun Chen
The ESKAPE pathogen-associated antimicrobial resistance is a global public health issue, and novel therapeutic strategies are urgently needed. The short cationic antimicrobial peptide (AMP) family represents an important subfamily of scorpion-derived AMPs, but high hemolysis and poor antimicrobial activity hinder their therapeutic application. Here, we recomposed the hydrophilic face of Ctriporin through lysine substitution. We observed non-linear correlations between the physiochemical properties of the peptides and their activities, and significant deviations regarding the changes of antimicrobial activities against different bacterial species, as well as hemolytic activity...
March 18, 2024: Toxins
https://read.qxmd.com/read/38535821/unveiling-the-diversity-and-modifications-of-short-peptides-in-buthus-martensii-scorpion-venom-through-liquid-chromatography-high-resolution-mass-spectrometry
#27
JOURNAL ARTICLE
Ling Zeng, Cangman Zhang, Mingrong Yang, Jianfeng Sun, Jingguang Lu, Huixia Zhang, Jianfeng Qin, Wei Zhang, Zhihong Jiang
More recently, short peptides in scorpion venom have received much attention because of their potential for drug discovery. Although various biological effects of these short peptides have been found, their studies have been hindered by the lack of structural information especially in modifications. In this study, small peptides from scorpion venom were investigated using high-performance liquid chromatography high-resolution mass spectrometry followed by de novo sequencing. A total of 156 sequences consisting of 2~12 amino acids were temporarily identified from Buthus martensii scorpion venom...
March 16, 2024: Toxins
https://read.qxmd.com/read/38535792/characterization-of-sodium-channel-peptides-obtained-from-the-venom-of-the-scorpion-centruroides-bonito
#28
JOURNAL ARTICLE
Rita Restano-Cassulini, Timoteo Olamendi-Portugal, Lidia Riaño-Umbarila, Fernando Z Zamudio, Gustavo Delgado-Prudencio, Baltazar Becerril, Lourival D Possani
Five peptides were isolated from the venom of the Mexican scorpion Centruroides bonito by chromatographic procedures (molecular weight sieving, ion exchange columns, and HPLC) and were denoted Cbo1 to Cbo5. The first four peptides contain 66 amino acid residues and the last one contains 65 amino acids, stabilized by four disulfide bonds, with a molecular weight spanning from about 7.5 to 7.8 kDa. Four of them are toxic to mice, and their function on human Na+ channels expressed in HEK and CHO cells was verified...
March 1, 2024: Toxins
https://read.qxmd.com/read/38522587/pharmacokinetic-evaluation-of-a-single-chain-antibody-fragment-against-scorpion-toxins-in-sheep
#29
JOURNAL ARTICLE
Roberto Olivares Hernández, Lidia Riaño Umbarila, Baltazar Becerril, Alejandro Alagón Cano, Hilda Vazquez Lopez
A key aspect during the development of antivenoms is the evaluation of the efficiency and security of the therapeutic molecules. In this work, we report the pharmacokinetic analysis of a neutralizing single chain antibody fragment named LR (scFv LR) where three sheep were used as a large animal model. The animals were injected through i.v. route with 2 mg of scFv LR. Blood samples were drawn every minute within the first 15 min, the sampling continues at 20, 25, 30, 45, 60, 90, 120 min, subsequently at one-hour intervals, 3, 4, 5, 6 h, two more samples at 9 and 12 h and, two more samples at 24 and 48 hours and finally at one-day intervals during 4 days...
March 22, 2024: Toxicon: Official Journal of the International Society on Toxinology
https://read.qxmd.com/read/38505508/an-overview-of-some-enzymes-from-buthid-scorpion-venoms-from-colombia-centruroides-margaritatus-tityus-pachyurus-and-tityus-n-sp-aff-metuendus
#30
JOURNAL ARTICLE
Leydy Lorena Mendoza-Tobar, Herlinda Clement, Iván Arenas, Juan Carlos Sepulveda-Arias, Jimmy Alexander Guerrero Vargas, Gerardo Corzo
BACKGROUND: In Colombia, several species of Buthidae scorpions belonging to the genera Centruroides and Tityus coexist, and their stings are considered life-threatening to humans because of their venom neurotoxins. Despite previous studies focusing on neurotoxins from these scorpion genera, little is known about the enzymes present in their venoms and their relationship with whole venom toxicity. METHODS: Here, using proteomic and biochemical protocols the enzymatic activities of the venoms of three Colombian scorpion species, C...
2024: Journal of Venomous Animals and Toxins Including Tropical Diseases
https://read.qxmd.com/read/38487666/%C3%AF-a-new-species-of-the-genus-scorpiops-peters-1861-subgenus-euscorpiops-vachon-1980-from-thailand-scorpiones-scorpiopidae
#31
JOURNAL ARTICLE
Wasin Nawanetiwong, Ondřej Košulič, Natapot Warrit, Wilson R Lourenço, Eric Ythier
A new species, Scorpiops (Euscorpiops) krachan sp. nov. , belonging to the family Scorpiopidae Kraepelin, 1905 is described based on three adult males and one adult female collected in the Kaeng Krachan National Park, Phetchaburi Province, Thailand. The new species presents most features exhibited by scorpions of the subgenus Euscorpiops and can be characterized notably by a very small size, a sexual dimorphism strongly marked with male pedipalps elongated, a distinct trichobothrial pattern and other morphological features...
2024: ZooKeys
https://read.qxmd.com/read/38459274/enabling-comparative-gene-regulatory-network-analysis-on-single-cell-data-with-scorpion
#32
JOURNAL ARTICLE
(no author information available yet)
No abstract text is available yet for this article.
March 8, 2024: Nature computational science
https://read.qxmd.com/read/38438786/population-level-comparisons-of-gene-regulatory-networks-modeled-on-high-throughput-single-cell-transcriptomics-data
#33
JOURNAL ARTICLE
Daniel Osorio, Anna Capasso, S Gail Eckhardt, Uma Giri, Alexander Somma, Todd M Pitts, Christopher H Lieu, Wells A Messersmith, Stacey M Bagby, Harinder Singh, Jishnu Das, Nidhi Sahni, S Stephen Yi, Marieke L Kuijjer
Single-cell technologies enable high-resolution studies of phenotype-defining molecular mechanisms. However, data sparsity and cellular heterogeneity make modeling biological variability across single-cell samples difficult. Here we present SCORPION, a tool that uses a message-passing algorithm to reconstruct comparable gene regulatory networks from single-cell/nuclei RNA-sequencing data that are suitable for population-level comparisons by leveraging the same baseline priors. Using synthetic data, we found that SCORPION outperformed 12 existing gene regulatory network reconstruction techniques...
March 4, 2024: Nature computational science
https://read.qxmd.com/read/38435243/how-to-avoid-suture-damage-in-simultaneous-anterior-cruciate-ligament-reconstruction-and-lateral-meniscal-posterior-root-reinsertion-with-the-transtibial-pullout-technique-a-technical-note
#34
JOURNAL ARTICLE
Alice Nlandu, Giancarlo Giurazza, Mohammed Lahsika, Jae-Sung An, Dunio Jacome-Pacheco, Leonardo Venzo, Kaushal Patel, Thais Dutra Vieira, Bertrand Sonnery-Cottet
Lateral meniscus posterior root tears (LMPRTs) are estimated to occur in 7% to 12% of anterior cruciate ligament (ACL)-injured knees. This topic is of great interest because of their biomechanical consequences in terms of interruption of hoop stress distribution. If left unrepaired, the corresponding compartment is exposed to unfavorable contact dynamics, similar to those resulting from a total meniscectomy. This Technical Note describes a transtibial LMPRT repair using a Knee Scorpion and an 18-gauge spinal needle...
February 2024: Arthroscopy Techniques
https://read.qxmd.com/read/38431816/features-of-immune-reactivity-of-the-spleen-and-mechanisms-of-organ-damage-under-the-influence-of-animal-venom-toxins-including-scorpions-review
#35
JOURNAL ARTICLE
Inha Samborska, Oleksandr Maievskyi, Larysa Podzihun, Victoriia Lavrynenko
OBJECTIVE: Aim: To establish features of immune reactivity of the spleen and mechanisms of organ damage under the influence of animal venom toxins including scorpions. PATIENTS AND METHODS: Materials and Methods: A thorough literature analysis was conducted on the basis of PubMed, Google Scholar, Web of Science, and Scopus databases. When processing the search results, we chose the newest publications up to 5 years old or the most thorough publications that vividly described the essence of our topic...
2024: Wiadomości Lekarskie: Organ Polskiego Towarzystwa Lekarskiego
https://read.qxmd.com/read/38428629/scorpion-envenomation-in-brazil-and-its-relationship-with-the-social-determinants-of-health-a-population-based-ecological-study
#36
JOURNAL ARTICLE
Thayane Santos Siqueira, Adriano José Dos Santos, João Lucas Cavalcante Santos, Rikelly Rhuana Nunes da Silva, José Rodrigo Santos Silva, Victor Santana Santos
This study comprehensively analyzed cases of scorpion envenomation in Brazil, exploring the temporal trends and geographic patterns of such incidents between January 1, 2012, and December 31, 2022. Simultaneously, we assessed the correlation between scorpion envenomation and social determinants of health and social vulnerability. We conducted a population-based ecological study, gathering information on the number of scorpion envenomation cases in Brazil, as well as socio-economic data and social vulnerability indicators across the 5,570 Brazilian municipalities...
February 28, 2024: Acta Tropica
https://read.qxmd.com/read/38424206/analysis-of-the-effect-of-the-scorpion-toxin-aah-ii-on-action-potential-generation-in-the-axon-initial-segment
#37
JOURNAL ARTICLE
Fatima Abbas, Laila Ananda Blömer, Hugo Millet, Jérôme Montnach, Michel De Waard, Marco Canepari
The toxin AaH-II, from the scorpion Androctonus australis Hector venom, is a 64 amino acid peptide that targets voltage-gated Na+ channels (VGNCs) and slows their inactivation. While at macroscopic cellular level AaH-II prolongs the action potential (AP), a functional analysis of the effect of the toxin in the axon initial segment (AIS), where VGNCs are highly expressed, was never performed so far. Here, we report an original analysis of the effect of AaH-II on the AP generation in the AIS of neocortical layer-5 pyramidal neurons from mouse brain slices...
February 29, 2024: Scientific Reports
https://read.qxmd.com/read/38408354/profiling-the-linear-peptides-of-venom-from-the-brazilian-scorpion-tityus-serrulatus-structural-and-functional-characterization
#38
JOURNAL ARTICLE
Nathalia Baptista Dias, Bibiana Monson de Souza, Fernanda Cid-Alda, Valquíria Abrão Coronado Dorce, Fernando Kamimura Cocchi, Mario Sergio Palma
Scorpion venoms are a rich source of bioactive peptides, most of which are neurotoxic, with 30 to 70 amino acid residues in their sequences. There are a scarcity of reports in the literature concerning the short linear peptides found in scorpion venoms. This type of peptide toxin may be selectively extracted from the venom using 50% (v/v) acetonitrile. The use of LC-MS and MS/MS enabled the detection of 12 bioactive short linear peptides, of which six were identified as cryptides. These peptides were shown to be multifunctional, causing hemolysis, mast cell degranulation and lysis, edema, pain, and anxiety, increasing the complexity of the envenomation mechanism...
February 26, 2024: Journal of Natural Products
https://read.qxmd.com/read/38403220/divergence-in-toxin-antigenicity-and-venom-enzymes-in-tityus-melici-a-medically-important-scorpion-despite-transcriptomic-and-phylogenetic-affinity-with-problematic-brazilian-species
#39
JOURNAL ARTICLE
Yan Kalapothakis, Kelton Miranda, Matheus Aragão, Débora Larangote, Gracielle Braga-Pereira, Marina Noetzold, Denis Molina, Rafael Langer, Izabela Mamede Conceição, Clara Guerra-Duarte, Carlos Chávez-Olórtegui, Evanguedes Kalapothakis, Adolfo Borges
The Brazilian scorpion Tityus melici, native to Minas Gerais and Bahia, is morphologically related to Tityus serrulatus, the most medically significant species in Brazil. Despite inhabiting scorpion-envenomation endemic regions, T. melici venom remains unexplored. This work evaluates T. melici venom composition and function using transcriptomics, enzymatic activities, and in vivo and in vitro immunological analyses. Next-Generation Sequencing unveiled 86 components putatively involved in venom toxicity: 39 toxins, 28 metalloproteases, seven disulfide isomerases, six hyaluronidases, three phospholipases and three amidating enzymes...
February 23, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38398622/co-2-driven-n-formylation-n-methylation-of-amines-using-c-scorpionate-metal-complexes
#40
JOURNAL ARTICLE
Inês A S Matias, Anna M Trzeciak, Paulina Pąchalska, Ana P C Ribeiro, Luísa M D R S Martins
C-scorpionate metal complexes, specifically, [NiCl2 (tpm)]·3H2 O, [CoCl2 (tpm)]·3H2 O and [PdCl2 (tpm)] [tpm = hydrotris(1H-pyrazol-1-yl)methane], were effective in the N-formylation and N-methylation of amines using carbon dioxide, as carbon source, in the presence of sodium borohydride. Various parameters were studied, including reaction time, temperature, solvent volume, presence of additives, and catalyst amount. These parameters were found to have a significant impact on the selectivity of the product...
February 16, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
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