keyword
https://read.qxmd.com/read/38643988/genetic-tools-for-cell-lineage-tracing-and-profiling-developmental-trajectories-in-the-skin
#21
JOURNAL ARTICLE
Jenny F Nathans, Jessica L Ayers, Jay Shendure, Cory L Simpson
The epidermis is the body's first line of protection against dehydration and pathogens, continually regenerating the outermost protective skin layers throughout life. During both embryonic development and wound healing, epidermal stem and progenitor cells must respond to external stimuli and insults to build, maintain, and repair the cutaneous barrier. Recent advances in CRISPR-based methods for cell lineage tracing have remarkably expanded the potential for experiments that track stem and progenitor cell proliferation and differentiation over the course of tissue and even organismal development...
May 2024: Journal of Investigative Dermatology
https://read.qxmd.com/read/38643867/sars-cov-2-mrna-vaccination-and-short-term-changes-in-viral-load-and-cd4-cd8-t-cell-counts-in-people-living-with-hiv
#22
JOURNAL ARTICLE
Alessandra Vergori, Alessandro Cozzi-Lepri, Alessandro Tavelli, Valentina Mazzotta, Anna Maria Azzini, Roberta Gagliardini, Ilaria Mastrorosa, Alessandra Latini, Giovanni Pellicanò, Lucia Taramasso, Francesca Ceccherini-Silberstein, Maddalena Giannella, Evelina Tacconelli, Giulia Marchetti, Antonella d'Arminio Monforte, Andrea Antinori
OBJECTIVES: To investigate if SARS-CoV-2 mRNA vaccination has an impact on HIV-related viro-immunological parameters. METHODS: PWH of the VAXICONA-ORCHESTRA cohort who received ≥1 dose of SARS-CoV-2 mRNA vaccine and for whom paired measures of immuno-virological markers [Viral Load (VL), CD4, CD8 count 1 month before and after a vaccine dose (VD)] were available, were included. Paired t-test and generalized estimating equation linear regression analyses were used to study changes over ± 1 month around the VD...
April 19, 2024: International Journal of Infectious Diseases: IJID
https://read.qxmd.com/read/38643332/enhanced-potent-immunosuppression-of-intracellular-adipose-tissue-derived-stem-cell-extract-by-priming-with-three-dimensional-spheroid-formation
#23
JOURNAL ARTICLE
Witchayapon Kamprom, Rattanawan Tangporncharoen, Nuttapoom Vongthaiwan, Patcharapa Tragoonlugkana, Jitrada Phetfong, Chatchai Pruksapong, Aungkura Supokawej
Immunomodulatory properties of mesenchymal stem cells are widely studied, supporting the use of MSCs as cell-based therapy in immunological diseases. This study aims to generate cell-free MSC extract and improves their immunomodulatory potential. Intracellular extracts were prepared from adipose-derived stem cells (ADSC) spheroid via a freeze-thawing method. The immunomodulatory capacities of ADSC spheroid extracts were investigated in vitro, including lymphocyte proliferation, T regulatory cell expansion, and macrophage assays...
April 20, 2024: Scientific Reports
https://read.qxmd.com/read/38642491/exploratory-drug-discovery-in-breast-cancer-patients-a-multimodal-deep-learning-approach-to-identify-novel-drug-candidates-targeting-rtk-signaling
#24
JOURNAL ARTICLE
Anush Karampuri, Sunitha Kundur, Shyam Perugu
Breast cancer, a highly formidable and diverse malignancy predominantly affecting women globally, poses a significant threat due to its intricate genetic variability, rendering it challenging to diagnose accurately. Various therapies such as immunotherapy, radiotherapy, and diverse chemotherapy approaches like drug repurposing and combination therapy are widely used depending on cancer subtype and metastasis severity. Our study revolves around an innovative drug discovery strategy targeting potential drug candidates specific to RTK signalling, a prominently targeted receptor class in cancer...
April 16, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38642265/-1-h-13-c-and-15-n-backbone-and-methyl-group-resonance-assignments-of-ricin-toxin-a-subunit
#25
JOURNAL ARTICLE
Shibani Bhattacharya, Tassadite Dahmane, Michael J Goger, Michael J Rudolph, Nilgun E Tumer
Ricin is a potent plant toxin that targets the eukaryotic ribosome by depurinating an adenine from the sarcin-ricin loop (SRL), a highly conserved stem-loop of the rRNA. As a category-B agent for bioterrorism it is a prime target for therapeutic intervention with antibodies and enzyme blocking inhibitors since no effective therapy exists for ricin. Ricin toxin A subunit (RTA) depurinates the SRL by binding to the P-stalk proteins at a remote site. Stimulation of the N-glycosidase activity of RTA by the P-stalk proteins has been studied extensively by biochemical methods and by X-ray crystallography...
April 20, 2024: Biomolecular NMR Assignments
https://read.qxmd.com/read/38642188/multi-omics-analysis-of-immune-related-microbiome-and-prognostic-model-in-head-and-neck-squamous-cell-carcinoma
#26
JOURNAL ARTICLE
Yingqiao Liu, Haitao Lin, Weijun Zhong, Yudi Zeng, Guihai Zhou, Zhifeng Chen, Shi Huang, Leitao Zhang, Xiqiang Liu
OBJECTIVES: The aim of our study is to explore the transcriptional and microbial characteristics of head and neck cancer's immune phenotypes using a multi-omics approach. MATERIALS AND METHODS: Employing TCGA data, we analyzed head and neck squamous cell carcinoma (HNSCC) immune cells with CIBERSORT and identified differentially expressed genes using DESeq2. Microbial profiles, obtained from the TCMA database, were analyzed using LEfSe algorithm to identify differential microbes in immune cell infiltration (ICI) subgroups...
April 20, 2024: Clinical Oral Investigations
https://read.qxmd.com/read/38641791/immunogenicity-and-safety-of-a-recombinant-covid-19-vaccine-zf2001-as-heterologous-booster-after-priming-with-inactivated-vaccine-in-healthy-children-and-adolescents-aged-3-17-years-an-open-labeled-single-arm-clinical-trial
#27
JOURNAL ARTICLE
Tao Huang, Qianqian Hu, Xiang Zhou, Huaiyu Yang, Wei Xia, Feng Cao, Minglu Deng, Xiaoxue Teng, Fan Ding, Zaixin Zhong, Lidong Gao, Jiufeng Sun, Lihui Gong
Considering that neutralizing antibody levels induced by two doses of the inactivated vaccine decreased over time and had fallen to low levels by 6 months, and homologous and heterologous booster immunization programs have been implemented in adults in China. The booster immunization of recombinant COVID-19 vaccine (ZF2001) after priming with inactivated vaccine in healthy children and adolescents has not been reported. We performed an open-labeled, single-arm clinical trial to evaluate the safety and immunogenicity of heterologous booster immunization with ZF2001 after priming with inactivated vaccine among 240 population aged 3-17 years in China...
April 19, 2024: BMC Infectious Diseases
https://read.qxmd.com/read/38641719/coordination-of-transcription-factors-and-swi-snf-complexes-regulates-chromatin-priming-in-developing-t-cells
#28
JOURNAL ARTICLE
Jingwen Liao, Diana C Hargreaves
No abstract text is available yet for this article.
April 19, 2024: Nature Immunology
https://read.qxmd.com/read/38641710/synthetic-cationic-helical-polypeptides-for-the-stimulation-of-antitumour-innate-immune-pathways-in-antigen-presenting-cells
#29
JOURNAL ARTICLE
DaeYong Lee, Kristin Huntoon, Yifan Wang, Minjeong Kang, Yifei Lu, Seong Dong Jeong, Todd M Link, Thomas D Gallup, Yaqing Qie, Xuefeng Li, Shiyan Dong, Benjamin R Schrank, Adam J Grippin, Abin Antony, JongHoon Ha, Mengyu Chang, Yi An, Liang Wang, Dadi Jiang, Jing Li, Albert C Koong, John A Tainer, Wen Jiang, Betty Y S Kim
Intracellular DNA sensors regulate innate immunity and can provide a bridge to adaptive immunogenicity. However, the activation of the sensors in antigen-presenting cells (APCs) by natural agonists such as double-stranded DNAs or cyclic nucleotides is impeded by poor intracellular delivery, serum stability, enzymatic degradation and rapid systemic clearance. Here we show that the hydrophobicity, electrostatic charge and secondary conformation of helical polypeptides can be optimized to stimulate innate immune pathways via endoplasmic reticulum stress in APCs...
April 19, 2024: Nature Biomedical Engineering
https://read.qxmd.com/read/38641492/vlps-generated-by-the-fusion-of-rsv-f-or-hmpv-f-glycoprotein-to-hiv-gag-show-improved-immunogenicity-and-neutralizing-response-in-mice
#30
JOURNAL ARTICLE
Benjamin Trinité, Eberhard Durr, Anna Pons-Grífols, Gregory O'Donnell, Carmen Aguilar-Gurrieri, Silveria Rodriguez, Victor Urrea, Ferran Tarrés, Joel Mane, Raquel Ortiz, Carla Rovirosa, Jorge Carrillo, Bonaventura Clotet, Lan Zhang, Julià Blanco
Respiratory syncytial virus (RSV) and human metapneumovirus (hMPV) vaccines have been long overdue. Structure-based vaccine design created a new momentum in the last decade, and the first RSV vaccines have finally been approved in older adults and pregnant individuals. These vaccines are based on recombinant stabilized pre-fusion F glycoproteins administered as soluble proteins. Multimeric antigenic display could markedly improve immunogenicity and should be evaluated in the next generations of vaccines. Here we tested a new virus like particles-based vaccine platform which utilizes the direct fusion of an immunogen of interest to the structural human immunodeficient virus (HIV) protein Gag to increase its surface density and immunogenicity...
April 18, 2024: Vaccine
https://read.qxmd.com/read/38641266/morphosyntactic-prediction-in-automatic-neural-processing-of-spoken-language-eeg-evidence
#31
JOURNAL ARTICLE
Maria Alekseeva, Andriy Myachykov, Beatriz Bermudez Margaretto, Yury Shtyrov
Automatic parsing of syntactic information by the human brain is a well-established phenomenon, but its mechanisms remain poorly understood. Its best-known neurophysiological reflection is early left-anterior negativity (ELAN) ERP component with two alternative hypotheses for its origin: (1) error detection, or (2) morphosyntactic prediction/priming. To test these alternatives, we conducted two experiments using a non-attend passive design with visual distraction and recorded ERPs to spoken pronoun-verb phrases and the same critical verbs presented in isolation without pronouns...
April 17, 2024: Brain Research
https://read.qxmd.com/read/38641252/transposon-insertion-in-rothia-dentocariosa
#32
JOURNAL ARTICLE
Boang Liu, Chiho Mashimo, Takayuki Nambu, Hugo Maruyama, Toshinori Okinaga
OBJECTIVES: Rothia spp. are emerging as significant bacteria associated with oral health, with Rothia dentocariosa being one of the most prevalent species. However, there is a lack of studies examining these properties at the genetic level. This study aimed to establish a genetic modification platform for R. dentocariosa. METHODS: Rothia spp. were isolated from saliva samples collected from healthy volunteers. Subsequently, R. dentocariosa strains were identified through colony morphology, species-specific polymerase chain reaction (PCR), and 16S ribosomal RNA gene sequencing...
April 17, 2024: Journal of Oral Biosciences
https://read.qxmd.com/read/38640927/sustained-erk-signaling-promotes-g2-cell-cycle-exit-and-primes-cells-for-whole-genome-duplication
#33
JOURNAL ARTICLE
Adler Guerrero Zuniga, Timothy J Aikin, Connor McKenney, Yovel Lendner, Alain Phung, Paul W Hook, Amy Meltzer, Winston Timp, Sergi Regot
Whole-genome duplication (WGD) is a frequent event in cancer evolution that fuels chromosomal instability. WGD can result from mitotic errors or endoreduplication, yet the molecular mechanisms that drive WGD remain unclear. Here, we use live single-cell analysis to characterize cell-cycle dynamics upon aberrant Ras-ERK signaling. We find that sustained ERK signaling in human cells leads to reactivation of the APC/C in G2, resulting in tetraploid G0-like cells that are primed for WGD. This process is independent of DNA damage or p53 but dependent on p21...
April 11, 2024: Developmental Cell
https://read.qxmd.com/read/38640063/macrophage-memories-of-early-life-injury-drive-neonatal-nociceptive-priming
#34
JOURNAL ARTICLE
Adam J Dourson, Adewale O Fadaka, Anna M Warshak, Aditi Paranjpe, Benjamin Weinhaus, Luis F Queme, Megan C Hofmann, Heather M Evans, Omer A Donmez, Carmy Forney, Matthew T Weirauch, Leah C Kottyan, Daniel Lucas, George S Deepe, Michael P Jankowski
The developing peripheral nervous and immune systems are functionally distinct from those of adults. These systems are vulnerable to early-life injury, which influences outcomes related to nociception following subsequent injury later in life (i.e., "neonatal nociceptive priming"). The underpinnings of this phenomenon are unclear, although previous work indicates that macrophages are trained by inflammation and injury. Our findings show that macrophages are both necessary and partially sufficient to drive neonatal nociceptive priming, possibly due to a long-lasting remodeling in chromatin structure...
April 18, 2024: Cell Reports
https://read.qxmd.com/read/38639795/gn-protein-expressed-in-plants-for-diagnosis-of-severe-fever-with-thrombocytopenia-syndrome-virus
#35
JOURNAL ARTICLE
Yu-Chih Chang, Hiroshi Shimoda, Min-Chao Jiang, Yau-Heiu Hsu, Ken Maeda, Yumiko Yamada, Wei-Li Hsu
Severe fever with thrombocytopenia syndrome virus (SFTSV) causes the highly fatal disease in humans. To facilitate diagnosis, the native form of subunit glycoprotein (Gn), a prime target for potential vaccines and therapies, was produced in Nicotiana benthamiana using a Bamboo mosaic virus-based vector system. By fusion with secretory signal tags, SSExt , derived from the extension protein, and the (SP)10 motif, the yield of the recombinant Gn (rGn) was remarkably increased to approximately 7 mg/kg infiltrated leaves...
April 19, 2024: Applied Microbiology and Biotechnology
https://read.qxmd.com/read/38639575/quantum-beats-between-spin-singlet-and-spin-triplet-interlayer-exciton-transitions-in-wse-2-mose-2-heterobilayers
#36
JOURNAL ARTICLE
Mehmet Atıf Durmuş, Ibrahim Sarpkaya
The long-lived interlayer excitons (IXs) of semiconducting transition metal dichalcogenide heterobilayers are prime candidates for developing various optoelectronic and valleytronic devices. Their photophysical properties, including fine structure, have been the focus of recent studies, and the presence of two spin states, namely, spin-singlet and spin-triplet, has been experimentally confirmed. However, the existence of the interaction between these states and their nature remains unknown to date. Here, we demonstrate the presence of coherent coupling between the spin-singlet and spin-triplet IXs of a WSe2 -MoSe2 heterobilayer utilizing quantum beat spectroscopy via a home-built Michelson interferometer...
April 19, 2024: Nano Letters
https://read.qxmd.com/read/38638353/redox-priming-could-be-an-appropriate-technique-to-minimize-drought-induced-adversities-in-quinoa
#37
JOURNAL ARTICLE
Hassan Iqbal, Chen Yaning
The exogenous use of the redox compound (H2 O2 ) plays a significant role in abiotic stress tolerance. The present study investigated various H2 O2 application methods (seed priming, foliar spray, and surface irrigation) with varying concentration levels (0 mM, 5 mM, 10 mM, 15 mM, 40 mM, 80 mM, and 160 mM) to evaluate the efficiency of supplying exogenous H2 O2 to quinoa under water-deficit conditions. Drought stress reduced quinoa growth and yield by perturbing morphological traits, leading to the overproduction of reactive oxygen species and increased electrolyte leakage...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38637678/type-1-secretion-necessitates-a-tight-interplay-between-all-domains-of-the-abc-transporter
#38
JOURNAL ARTICLE
Manuel T Anlauf, Florestan L Bilsing, Jens Reiners, Olivia Spitz, Eymen Hachani, Sander H J Smits, Lutz Schmitt
Type I secretion systems (T1SS) facilitate the secretion of substrates in one step across both membranes of Gram-negative bacteria. A prime example is the hemolysin T1SS which secretes the toxin HlyA. Secretion is energized by the ABC transporter HlyB, which forms a complex together with the membrane fusion protein HlyD and the outer membrane protein TolC. HlyB features three domains: an N-terminal C39 peptidase-like domain (CLD), a transmembrane domain (TMD) and a C-terminal nucleotide binding domain (NBD)...
April 18, 2024: Scientific Reports
https://read.qxmd.com/read/38637555/massively-parallel-screen-uncovers-many-rare-3-utr-variants-regulating-mrna-abundance-of-cancer-driver-genes
#39
JOURNAL ARTICLE
Ting Fu, Kofi Amoah, Tracey W Chan, Jae Hoon Bahn, Jae-Hyung Lee, Sari Terrazas, Rockie Chong, Sriram Kosuri, Xinshu Xiao
Understanding the function of rare non-coding variants represents a significant challenge. Using MapUTR, a screening method, we studied the function of rare 3' UTR variants affecting mRNA abundance post-transcriptionally. Among 17,301 rare gnomAD variants, an average of 24.5% were functional, with 70% in cancer-related genes, many in critical cancer pathways. This observation motivated an interrogation of 11,929 somatic mutations, uncovering 3928 (33%) functional mutations in 155 cancer driver genes. Functional MapUTR variants were enriched in microRNA- or protein-binding sites and may underlie outlier gene expression in tumors...
April 18, 2024: Nature Communications
https://read.qxmd.com/read/38636651/dihydroartemisinin-is-an-inhibitor-of-trained-immunity-through-akt-mtor-hif1%C3%AE-signaling-pathway
#40
JOURNAL ARTICLE
Yu Gao, Zhen-Zhen Liu, Jia-Bao Zhang, Cheng-Kai Zhou, Jian-Gang Zhang, Xiao-Qi Lin, Qi Yin, Wei Chen, Yong-Jun Yang
Trained immunity is mechanistically defined as the metabolically and epigenetically mediated long-term functional adaptation of the innate immune system, characterized by a heightened response to a secondary stimulation. Given appropriate activation, trained immunity represents an attractive anti-infective therapeutic target. Nevertheless, excessive immune response and subsequent inflammatory cascades may contribute to pathological tissue damage, indicating that the negative impacts of trained immunity appear to be significant...
April 16, 2024: Experimental Cell Research
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