keyword
https://read.qxmd.com/read/38605988/codon-optimization-in-gene-therapy-promises-prospects-and-challenges
#21
REVIEW
Anastasiia Iu Paremskaia, Anna A Kogan, Anastasiia Murashkina, Daria A Naumova, Anakha Satish, Ivan S Abramov, Sofya G Feoktistova, Olga N Mityaeva, Andrei A Deviatkin, Pavel Yu Volchkov
Codon optimization has evolved to enhance protein expression efficiency by exploiting the genetic code's redundancy, allowing for multiple codon options for a single amino acid. Initially observed in E. coli , optimal codon usage correlates with high gene expression, which has propelled applications expanding from basic research to biopharmaceuticals and vaccine development. The method is especially valuable for adjusting immune responses in gene therapies and has the potenial to create tissue-specific therapies...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38605649/2x-rhodamine-a-bright-and-fluorogenic-scaffold-for-developing-near-infrared-chemigenetic-indicators
#22
JOURNAL ARTICLE
Wenxiao Wu, Kui Yan, Zuyang He, Lu Zhang, Yuyao Dong, Bin Wu, Hongyue Liu, Shangfeng Wang, Fan Zhang
Chemigenetic fusion of synthetic dyes with genetically encoded protein tags presents a promising avenue for in vivo imaging. However, its full potential has been hindered by the lack of bright and fluorogenic dyes operating in the "tissue transparency" near-infrared window (NIR, 700-1700 nm). Here, we report 2X-rhodamine (2XR), a novel bright scaffold that allows for the development of live-cell-compatible, NIR-excited variants with strong fluorogenicity beyond 1000 nm. 2XR utilizes a rigidified π-skeleton featuring dual atomic bridges and functions via a spiro-based fluorogenic mechanism...
April 12, 2024: Journal of the American Chemical Society
https://read.qxmd.com/read/38605289/genetic-insights-into-superior-grain-number-traits-a-qtl-analysis-of-wheat-agropyron-cristatum-derivative-pubing3228
#23
JOURNAL ARTICLE
Jiansheng Wang, Erwei Wang, Shiping Cheng, Aichu Ma
BACKGROUND: Agropyron cristatum (L.) is a valuable genetic resource for expanding the genetic diversity of common wheat. Pubing3228, a novel wheat-A. cristatum hybrid germplasm, exhibits several desirable agricultural traits, including high grain number per spike (GNS). Understanding the genetic architecture of GNS in Pubing3228 is crucial for enhancing wheat yield. This study aims to analyze the specific genetic regions and alleles associated with high GNS in Pubing3228. METHODS: The study employed a recombination inbred line (RIL) population derived from a cross between Pubing3228 and Jing4839 to investigate the genetic regions and alleles linked to high GNS...
April 11, 2024: BMC Plant Biology
https://read.qxmd.com/read/38605228/lymphatic-vessels-in-the-age-of-cancer-immunotherapy
#24
REVIEW
Triantafyllia Karakousi, Tenny Mudianto, Amanda W Lund
Lymphatic transport maintains homeostatic health and is necessary for immune surveillance, and yet lymphatic growth is often associated with solid tumour development and dissemination. Although tumour-associated lymphatic remodelling and growth were initially presumed to simply expand a passive route for regional metastasis, emerging research puts lymphatic vessels and their active transport at the interface of metastasis, tumour-associated inflammation and systemic immune surveillance. Here, we discuss active mechanisms through which lymphatic vessels shape their transport function to influence peripheral tissue immunity and the current understanding of how tumour-associated lymphatic vessels may both augment and disrupt antitumour immune surveillance...
April 11, 2024: Nature Reviews. Cancer
https://read.qxmd.com/read/38605218/human-embryonic-genetic-mosaicism-and-its-effects-on-development-and-disease
#25
REVIEW
Sarah M Waldvogel, Jennifer E Posey, Margaret A Goodell
Nearly every mammalian cell division is accompanied by a mutational event that becomes fixed in a daughter cell. When carried forward to additional cell progeny, a clone of variant cells can emerge. As a result, mammals are complex mosaics of clones that are genetically distinct from one another. Recent high-throughput sequencing studies have revealed that mosaicism is common, clone sizes often increase with age and specific variants can affect tissue function and disease development. Variants that are acquired during early embryogenesis are shared by multiple cell types and can affect numerous tissues...
April 11, 2024: Nature Reviews. Genetics
https://read.qxmd.com/read/38604289/obesity-standards-trends-and-advances
#26
REVIEW
Jakub Gołacki, Beata Matyjaszek-Matuszek
Obesity continues to be a significant global health concern, giving rise to various complications. This review article explores the current standards and emerging innovations in diagnosing and treating obesity, including recent disease name change, staging system or therapeutic goals. This narrative review has been based on recent scientific articles from PubMed database, limiting the scope of topics to current standards and upcoming developments and breakthroughs in the diagnosis and treatment of obesity. The educational and informative nature of the review has been maintained in order to make the information presented accessible to both researchers and clinical practitioners...
April 9, 2024: Advances in Medical Sciences
https://read.qxmd.com/read/38602657/anatomical-assessment-of-local-recurrence-site-in-breast-cancer-patients-after-breast-reconstruction-and-post-mastectomy-radiotherapy-implications-for-radiation-volumes-and-techniques
#27
JOURNAL ARTICLE
Viola Salvestrini, Marianna Valzano, Icro Meattini, Carlotta Becherini, Luca Visani, Giulio Francolini, Ilaria Morelli, Niccolò Bertini, Lorenzo Orzalesi, Marco Bernini, Simonetta Bianchi, Gabriele Simontacchi, Lorenzo Livi, Isacco Desideri
INTRODUCTION: Post-mastectomy radiotherapy (PMRT) improves local control rates and survival in patients with adverse prognostic features. The dose coverage to target volumes is critical to yield maximum benefit to treated patients, increasing local control and reducing risk of toxicity. This study aims to assess patterns of breast cancer relapse in patients treated with mastectomy, breast reconstruction and PMRT. METHODS: Breast cancer patients treated with PMRT between 1992 and 2017 were retrospectively reviewed...
April 11, 2024: La Radiologia Medica
https://read.qxmd.com/read/38602264/clover-an-unbiased-method-for-prioritizing-differentially-expressed-genes-using-a-data-driven-approach
#28
JOURNAL ARTICLE
Gina Miku Oba, Ryuichiro Nakato
Identifying key genes from a list of differentially expressed genes (DEGs) is a critical step in transcriptome analysis. However, current methods, including Gene Ontology analysis and manual annotation, essentially rely on existing knowledge, which is highly biased depending on the extent of the literature. As a result, understudied genes, some of which may be associated with important molecular mechanisms, are often ignored or remain obscure. To address this problem, we propose Clover, a data-driven scoring method to specifically highlight understudied genes...
April 11, 2024: Genes to Cells: Devoted to Molecular & Cellular Mechanisms
https://read.qxmd.com/read/38601411/superficial-temporal-artery-island-flap-combined-with-laser-hair-removal-for-inadequate-skin-expansion-following-tissue-expansion-a-case-report-of-congenital-melanocytic-nevus-of-the-forehead-in-an-adult
#29
Toshifumi Yamashiro, Momoko Yoshida, Junki Sato, Ryuichi Azuma
Tissue expansion is a handy reconstructive technique for the head and neck region; however, its implementation requires careful planning and surgical experience. If tissue expansion is inadequate, forced closure results in wound tension and risks complications, such as postoperative deformity, wide scarring, and wound dehiscence. We report a case of adult forehead melanocytic nevus excision using a tissue expander (TE) where complications caused by insufficient tissue expansion were avoided by creating a flap using a dog ear...
March 2024: Curēus
https://read.qxmd.com/read/38601291/pre-pectoral-breast-reconstruction-with-tissue-expander-entirely-covered-by-acellular-dermal-matrix-feasibility-safety-and-histological-features-resulting-from-the-first-64-procedures
#30
JOURNAL ARTICLE
Marco Bernini, Giacomo Gigliucci, Dario Cassetti, Cinzia Tommasi, Ilaria Gaggelli, Lorenzo Arlia, Carlotta Becherini, Viola Salvestrini, Luca Visani, Jacopo Nori Cucchiari, Diego De Benedetto, Federica Di Naro, Giulia Bicchierai, Chiara Bellini, Simonetta Bianchi, Lorenzo Orzalesi, Lorenzo Livi, Icro Meattini
BACKGROUND: Reconstructive options that can be used following conservative mastectomy, skin-, nipple-sparing and skin-reducing mastectomies, allow a remarkable variety of safe methods to restore the natural shape and aesthetics of the breast mound. In case of two-stage breast reconstruction, tissue expanders (TEs) are usually placed in a subpectoral position. The purpose of this retrospective cohort study is to evaluate the feasibility and safety of two-step reconstruction with TE in pre-pectoral position covered by acellular dermal matrix (ADM)...
March 27, 2024: Gland Surgery
https://read.qxmd.com/read/38601061/-in%C3%A2-vitro-effect-of-hydroxyethyl-starch-on-covid-19-patients-associated-hypofibrinolytic-state
#31
JOURNAL ARTICLE
Hamdi Rezigue, Michel Hanss, Jean-Stéphane David, Yesim Dargaud, Christophe Nougier
BACKGROUND: Despite systematic thromboprophylaxis, 30% of the COVID-19 patients in intensive care units develop thrombosis. This occurrence is associated with a hypofibrinolytic state measured by thromboelastometry when adding tissue plasminogen activator (tPA) to citrated whole blood for a further run for EXTEM (ROTEM). OBJECTIVES: Because hydroxyethyl starches (HESs) affect fibrin polymerization, we have assessed its potential effect on in vitro tPA-induced fibrinolysis...
February 2024: Research and Practice in Thrombosis and Haemostasis
https://read.qxmd.com/read/38600544/procedural-skills-workshops-for-primary-care-physicians-in-israel-a-comprehensive-analysis
#32
JOURNAL ARTICLE
Omer Rosenblum, Ilan Yehoshua, Limor Adler, Ori Liran
BACKGROUND: Some of the most common complaints addressed by primary care physicians (PCPs) require manual procedures, such as lacerations repair, abscesses drainage, ingrown toenails removal, dry needling for myofascial pain syndrome, and Epley maneuver for treating benign paroxysmal positional vertigo (BPPV). The aim of this study was to describe the procedural skills workshops program for PCPs implemented in Maccabi Healthcare Services and to investigate how many PCPs have participated and used the skills since the program's inception in 2017...
April 10, 2024: BMC Medical Education
https://read.qxmd.com/read/38599937/immune-checkpoints-in-autoimmune-vasculitis
#33
REVIEW
Yuki Sato, Maria Tada, Jorg J Goronzy, Cornelia M Weyand
Giant cell arteritis (GCA) is a prototypic autoimmune disease with a highly selective tissue tropism for medium and large arteries. Extravascular GCA manifests with intense systemic inflammation and polymyalgia rheumatica; vascular GCA results in vessel wall damage and stenosis, causing tissue ischemia. Typical granulomatous infiltrates in affected arteries are composed of CD4+ T cells and hyperactivated macrophages, signifying the involvement of the innate and adaptive immune system. Lesional CD4+ T cells undergo antigen-dependent clonal expansion, but antigen-nonspecific pathways ultimately control the intensity and duration of pathogenic immunity...
April 9, 2024: Best Practice & Research. Clinical Rheumatology
https://read.qxmd.com/read/38599553/identification-and-characterization-of-myeloid-cells-localized-in-the-tadpole-liver-cortex-in-xenopus-laevis
#34
JOURNAL ARTICLE
Mitsugu Maéno, Miki Tanabe, Ayame Ogawa, Haruka Kobayashi, Yumi Izutsu, Takashi Kato
In the present study, using transgenic frogs that express GFP specifically in myeloid cells under the myeloperoxidase enhancer sequence, we found that myeloperoxidase-positive cells are localized in the liver cortex at the late tadpole stages. Immunohistochemical analysis revealed that myelopoiesis in the liver cortex became evident after st. 50 and reached its peak by st. 56. Transplantation experiments indicated that cells with a high density at the liver cortex were derived from the dorso-lateral plate tissue in the neurula embryo...
April 8, 2024: Developmental and Comparative Immunology
https://read.qxmd.com/read/38599172/sensory-neurons-an-integrated-component-of-innate-immunity
#35
REVIEW
Liwen Deng, Jacob E Gillis, Isaac M Chiu, Daniel H Kaplan
The sensory nervous system possesses the ability to integrate exogenous threats and endogenous signals to mediate downstream effector functions. Sensory neurons have been shown to activate or suppress host defense and immunity against pathogens, depending on the tissue and disease state. Through this lens, pro- and anti-inflammatory neuroimmune effector functions can be interpreted as evolutionary adaptations by host or pathogen. Here, we discuss recent and impactful examples of neuroimmune circuitry that regulate tissue homeostasis, autoinflammation, and host defense...
April 9, 2024: Immunity
https://read.qxmd.com/read/38598037/identification-of-a-novel-intronic-variant-of-atp6v0a2-in-a-han-chinese-family-with-cutis-laxa
#36
JOURNAL ARTICLE
Ying Zhang, Mei Sun, Na Li, Yiran Zhao, Fang Zhang, Jianbo Shu, Yang Liu, Chunquan Cai
BACKGROUND: Cutis laxa is a connective tissue disease caused by abnormal synthesis or secretion of skin elastic fibers, leading to skin flabby and saggy in various body parts. It can be divided into congenital cutis laxa and acquired cutis laxa, and inherited cutis laxa syndromes is more common in clinic. METHODS: In this study, we reported a case of a Han-Chinese male newborn with ATP6V0A2 gene variant leading to cutis laxa. The proband was identified by whole-exome sequencing to determine the novel variant, and their parents were verified by Sanger sequencing...
April 10, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38596624/novel-strategies-in-scalp-expansion-improvements-and-applications-of-tissue-expanders
#37
JOURNAL ARTICLE
Fangzhou Xie, Jiaqi Qin, Bin Fang, Shuangbai Zhou, Ru-Lin Huang, Qingfeng Li, Rao Fu, Yun Xie
No abstract text is available yet for this article.
2024: Burns and Trauma
https://read.qxmd.com/read/38595803/laccase-induced-decontamination-and-humification-mechanisms-of-estrogen-in-water-crop-matrices
#38
JOURNAL ARTICLE
Kai Sun, Ling-Zhi Dai, Mei-Hua Chen, You-Bin Si, Guo-Dong Fang, Shun-Yao Li, Han-Qing Yu
Enzymatic humification plays a crucial biogeochemical role in eliminating steroidal estrogens and expanding organic carbon stocks. Estrogenic contaminants in agroecosystems can be taken up and acropetally translocated by crops, but the roles of laccase-triggered rhizospheric humification (L-TRH) in pollutant dissipation and plant uptake remain poorly understood. In this study, the laccase-induced decontamination and humification mechanisms of 17β-estradiol (E2) in water-crop media were investigated by performing greenhouse pot experiments with maize seedlings ( Zea mays L...
April 2024: PNAS Nexus
https://read.qxmd.com/read/38594944/accelerating-diverse-cell-based-therapies-through-scalable-design
#39
REVIEW
Emma L Peterman, Deon Ploessl, Kate E Galloway
Augmenting cells with novel, genetically encoded functions will support therapies that expand beyond natural capacity for immune surveillance and tissue regeneration. However, engineering cells at scale with transgenic cargoes remains a challenge in realizing the potential of cell-based therapies. In this review, we introduce a range of applications for engineering primary cells and stem cells for cell-based therapies. We highlight tools and advances that have launched mammalian cell engineering from bioproduction to precision editing of therapeutically relevant cells...
April 9, 2024: Annual Review of Chemical and Biomolecular Engineering
https://read.qxmd.com/read/38594748/a-phenotypic-screening-approach-to-target-p60amotl2-expressing-invasive-cancer-cells
#40
JOURNAL ARTICLE
Pedro Fonseca, Weiyingqi Cui, Nona Struyf, Le Tong, Ayushi Chaurasiya, Felipe Casagrande, Honglei Zhao, Dinura Fernando, Xinsong Chen, Nicholas P Tobin, Brinton Seashore-Ludlow, Andreas Lundqvist, Johan Hartman, Anita Göndör, Päivi Östling, Lars Holmgren
BACKGROUND: Tumor cells have the ability to invade and form small clusters that protrude into adjacent tissues, a phenomenon that is frequently observed at the periphery of a tumor as it expands into healthy tissues. The presence of these clusters is linked to poor prognosis and has proven challenging to treat using conventional therapies. We previously reported that p60AmotL2 expression is localized to invasive colon and breast cancer cells. In vitro, p60AmotL2 promotes epithelial cell invasion by negatively impacting E-cadherin/AmotL2-related mechanotransduction...
April 9, 2024: Journal of Experimental & Clinical Cancer Research: CR
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