keyword
https://read.qxmd.com/read/38019862/low-and-high-frequency-vibrations-synergistically-enhance-singlet-exciton-fission-through-robust-vibronic-resonances
#1
JOURNAL ARTICLE
Atandrita Bhattacharyya, Amitav Sahu, Sanjoy Patra, Vivek Tiwari
Singlet exciton fission (SEF) is initiated by ultrafast internal conversion of a singlet exciton into a correlated triplet pair [Formula: see text]. The "reaction coordinates" for ultrafast SEF even in archetypal systems such as pentacene thin film remain unclear. Couplings between fast electrons and slow nuclei are ubiquitous across a range of phenomena in chemistry. Accordingly, spectroscopic detection of vibrational coherences in the [Formula: see text] photoproduct motivated investigations into a possible role of vibronic coupling, akin to that reported in several photosynthetic proteins...
December 5, 2023: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/37611240/photon-energy-dependent-ultrafast-exciton-transfer-in-chlorosomes-of-chlorobium-tepidum-and-the-role-of-supramolecular-dynamics
#2
JOURNAL ARTICLE
Sean K Frehan, Lolita Dsouza, Xinmeng Li, Vesna Eríc, Thomas L C Jansen, Guido Mul, Alfred R Holzwarth, Francesco Buda, G J Agur Sevink, Huub J M de Groot, Annemarie Huijser
The antenna complex of green sulfur bacteria, the chlorosome, is one of the most efficient supramolecular systems for efficient long-range exciton transfer in nature. Femtosecond transient absorption experiments provide new insight into how vibrationally induced quantum overlap between exciton states supports highly efficient long-range exciton transfer in the chlorosome of Chlorobium tepidum . Our work shows that excitation energy is delocalized over the chlorosome in <1 ps at room temperature. The following exciton transfer to the baseplate occurs in ∼3 to 5 ps, in line with earlier work also performed at room temperature, but significantly faster than at the cryogenic temperatures used in previous studies...
August 23, 2023: Journal of Physical Chemistry. B
https://read.qxmd.com/read/37431749/-1-h-13-c-hsqc-nmr-analysis-of-cranberry-vaccinium-macrocarpon-juice-defines-the-chemical-composition-of-juice-precipitate
#3
JOURNAL ARTICLE
Matthew R Dorris, Wayne E Zeller, Bradley W Bolling
Shelf-stable cranberry juice precipitate has not been well characterized. Here, we describe using 1 H-13 C heteronuclear single quantum coherence-nuclear magnetic resonance (HSQC-NMR) spectroscopy for cranberry juice analysis, focusing on proanthocyanidins and the precipitate. HSQC-NMR cross-peaks from juices were categorized as aliphatic, olefinic, aromatic, carbohydrate backbone, or anomeric signals. An average cranberry juice precipitate had significantly more aromatic and significantly less carbohydrate backbone signals than an average supernatant...
July 11, 2023: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/37375418/exploring-proton-only-nmr-experiments-and-filters-for-daphnia-in-vivo-potential-and-limitations
#4
JOURNAL ARTICLE
Kiera Ronda, Katelyn Downey, Amy Jenne, Monica Bastawrous, William W Wolff, Katrina Steiner, Daniel H Lysak, Peter M Costa, Myrna J Simpson, Karl J Jobst, Andre J Simpson
Environmental metabolomics provides insight into how anthropogenic activities have an impact on the health of an organism at the molecular level. Within this field, in vivo NMR stands out as a powerful tool for monitoring real-time changes in an organism's metabolome. Typically, these studies use 2D 13 C-1 H experiments on 13 C-enriched organisms. Daphnia are the most studied species, given their widespread use in toxicity testing. However, with COVID-19 and other geopolitical factors, the cost of isotope enrichment increased ~6-7 fold over the last two years, making 13 C-enriched cultures difficult to maintain...
June 20, 2023: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/36930582/molecular-vibrational-polariton-dynamics-what-can-polaritons-do
#5
JOURNAL ARTICLE
Wei Xiong
ConspectusWhen molecular vibrational modes strongly couple to virtual states of photonic modes, new molecular vibrational polariton states are formed, along with a large population of dark reservoir modes. The polaritons are much like the bonding and antibonding molecular orbitals when atomic orbitals form molecular bonds, while the dark modes are like nonbonding orbitals. Because the polariton states are half-matter and half-light, whose energy is shifted from the parental states, polaritons are predicted to modify chemistry under thermally activated conditions, leading to an exciting and emerging field known as polariton chemistry that could potentially shift paradigms in chemistry...
March 17, 2023: Accounts of Chemical Research
https://read.qxmd.com/read/36799732/theoretical-study-on-thermal-structural-fluctuation-effects-of-intermolecular-configurations-on-singlet-fission-in-pentacene-crystal-models
#6
JOURNAL ARTICLE
Takayoshi Tonami, Hajime Miyamoto, Masayoshi Nakano, Ryohei Kishi, Yasutaka Kitagawa
Singlet fission (SF) occurs as a result of complex excited state relaxation dynamics in molecular aggregates, where a singlet exciton (FE) state is converted into a double-triplet exciton (TT) state through the interactions with several other degrees of freedom, such as nuclear motions. In this study, we combined quantum dynamics simulation based on the quantum master equation approach with all-atom-based classical molecular mechanics/molecular dynamics to examine the thermal structural fluctuation (i.e., static disorder) effects of intermolecular configuration on SF in pentacene crystal models...
February 17, 2023: Journal of Physical Chemistry. A
https://read.qxmd.com/read/36725522/vibrational-relaxation-by-methylated-xanthines-in-solution-insights-from-2d-ir-spectroscopy-and-calculations
#7
JOURNAL ARTICLE
Alex T Hanes, Christopher Grieco, Remy F Lalisse, Christopher M Hadad, Bern Kohler
Two-dimensional infrared (2D IR) spectroscopy, infrared pump-infrared probe spectroscopy, and density functional theory calculations were used to study vibrational relaxation by ring and carbonyl stretching modes in a series of methylated xanthine derivatives in acetonitrile and deuterium oxide (heavy water). Isotropic signals from the excited symmetric and asymmetric carbonyl stretch modes decay biexponentially in both solvents. Coherent energy transfer between the symmetric and asymmetric carbonyl stretching modes gives rise to a quantum beat in the time-dependent anisotropy signals...
January 28, 2023: Journal of Chemical Physics
https://read.qxmd.com/read/36659928/structure-based-discovery-and-in-vitro-validation-of-inhibitors-of-chloride-intracellular-channel-4-protein
#8
JOURNAL ARTICLE
Fisayo Olotu, Encarnacion Medina-Carmona, Angela Serrano-Sanchez, Felipe Ossa, Abdelaziz El-Hamdaoui, Özlem Tastan Bishop, Jose L Ortega-Roldan, Vahitha B Abdul-Salam
The use of computer-aided methods have continued to propel accelerated drug discovery across various disease models, interestingly allowing the specific inhibition of pathogenic targets. Chloride Intracellular Channel Protein 4 (CLIC4) is a novel class of intracellular ion channel highly implicated in tumor and vascular biology. It regulates cell proliferation, apoptosis and angiogenesis; and is involved in multiple pathologic signaling pathways. Absence of specific inhibitors however impedes its advancement to translational research...
2023: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/36656105/revealing-intermolecular-electronic-and-vibronic-coherence-with-polarization-dependent-two-dimensional-beating-maps
#9
JOURNAL ARTICLE
Xuan Leng, Yaming Yan, Ruidan Zhu, Jiading Zou, Wenzhao Zhang, Qiang Shi
Two-dimensional electronic spectroscopy (2DES) has been widely employed as an efficient tool to reveal the impact of intermolecular electronic and/or vibronic quantum coherence on excitation energy transfer in light-harvesting complexes. However, intramolecular vibrational coherence would also contribute to oscillating signals in 2D spectra, along with the intermolecular coherence signals that are directly related to energy transfer. In this work, the possibility of screening the vibrational coherence signals is explored through polarization-dependent 2DES...
January 19, 2023: Journal of Physical Chemistry Letters
https://read.qxmd.com/read/36562503/inspecting-molecular-aggregate-quadratic-vibronic-coupling-effects-using-squeezed-coherent-states
#10
JOURNAL ARTICLE
Mantas Jakučionis, Agnius Žukas, Darius Abramavičius
We present a systematic comparison of three quantum mechanical approaches describing excitation dynamics in molecular complexes using the time-dependent variational principle (TDVP) with increasing sophistication trial wavefunctions (ansatze): Davydov D2 , squeezed D2 (sqD2 ) and a numerically exact multiple D2 (mD2 ) ansatz in order to characterize validity of the sqD2 ansatz. Numerical simulations of molecular aggregate absorption and fluorescence spectra with intra- and intermolecular vibrational modes, including quadratic electronic-vibrational (vibronic) coupling term, which is due to vibrational frequency shift upon pigment excitation are presented...
December 23, 2022: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/36508201/direct-detection-of-hydrogen-bonds-in-supramolecular-systems-using-1-h-15-n-heteronuclear-multiple-quantum-coherence-spectroscopy
#11
JOURNAL ARTICLE
Michael A Jinks, Mark Howard, Federica Rizzi, Stephen M Goldup, Andrew D Burnett, Andrew J Wilson
Hydrogen-bonded supramolecular systems are usually characterized in solution through analysis of NMR data such as complexation-induced shifts and nuclear Overhauser effects (nOe). Routine direct detection of hydrogen bonding particularly in multicomponent mixtures, even with the aid of 2D NMR experiments for full assignment, is more challenging. We describe an elementary rapid 1 H-15 N HMQC NMR experiment which addresses these challenges without the need for complex pulse sequences. Under readily accessible conditions (243/263 K, 50 mM solutions) and natural 15 N abundance, unambiguous assignment of 15 N resonances facilitates direct detection of intra- and intermolecular hydrogen bonds in mechanically interlocked structures and quadruply hydrogen-bonded dimers─of dialkylaminoureidopyrimidinones, ureidopyrimidinones, and diamidonaphthyridines─in single or multicomponent mixtures to establish tautomeric configuration, conformation, and, to resolve self-sorted speciation...
December 12, 2022: Journal of the American Chemical Society
https://read.qxmd.com/read/36288936/advanced-solid-state-nmr-analysis-of-two-crystal-forms-of-ranitidine-hydrochloride-detection-of-1-h-14-n-intra-intermolecular-correlations
#12
JOURNAL ARTICLE
Hidetomo Yokoo, Seiji Tanaka, Eiichi Yamamoto, Genichiro Tsuji, Yosuke Demizu, Nahoko Uchiyama
Understanding the characteristics of crystal polymorphism of active pharmaceutical ingredients and analyzing them with high sensitivity is important for quality of drug products, appropriate characterization strategies, and appropriate screening and selection processes. However, there are few methods to measure intra- and intermolecular correlations in crystals other than X-ray crystallography, for which it is sometimes difficult to obtain suitable single crystals. Recently, solid-state NMR has been recognized as a straightforward method for measuring molecular correlations...
October 27, 2022: Chemical & Pharmaceutical Bulletin
https://read.qxmd.com/read/36094322/low-unsaturated-fatty-acids-level-in-the-vertebral-bone-marrow-of-postmenopausal-osteoporosis-a-pilot-2d-idqc-mrs-on-3-0-t-study
#13
JOURNAL ARTICLE
Jianfeng Bao, Zongye Li, Yue Zhang, Yuchuan Zhuang, Ying Li, Xiao Wang, Yanan Ren, Peipei Wang, Yong Zhang, Jingliang Cheng
BACKGROUND: Unsaturated fatty acids (UFAs) of bone marrow play a critical role in osteoporosis. However, it is difficult to resolve the UFA, especially in the presence of trabecular bone, using conventional magnetic resonance spectroscopy (MRS) methods. PURPOSE: To preliminarily compare the bone marrow fatty acids (FAs) composition in the presence of trabecular bone of postmenopausal osteoporosis (PMOP) and healthy controls (HC). STUDY TYPE: Prospective...
September 12, 2022: Journal of Magnetic Resonance Imaging: JMRI
https://read.qxmd.com/read/36075717/quantum-dynamical-study-of-inter-chain-exciton-transport-in-a-regioregular-p3ht-model-system-at-finite-temperature-hj-vs-h-aggregate-models
#14
JOURNAL ARTICLE
Manel Mondelo-Martell, Dominik Brey, Irene Burghardt
We report on quantum dynamical simulations of inter-chain exciton transport in a model of regioregular poly(3-hexylthiophene), rr-P3HT, at finite temperature using the Multi-Layer Multi-Configuration Time-Dependent Hartree method for a system of up to 63 electronic states and 180 vibrational modes. A Frenkel Hamiltonian of HJ aggregate type is used along with a reduced H-aggregate representation; electron-phonon coupling includes local high-frequency modes as well as anharmonic intermolecular modes. The latter are operative in mediating inter-chain transport by a mechanism of transient localization type...
September 7, 2022: Journal of Chemical Physics
https://read.qxmd.com/read/35780556/combining-heteronuclear-correlation-nmr-with-spin-diffusion-to-detect-relayed-cl-h-h-and-n-h-h-proximities-in-molecular-solids
#15
JOURNAL ARTICLE
Parth Raval, Julien Trébosc, Tomasz Pawlak, Yusuke Nishiyama, Steven P Brown, G N Manjunatha Reddy
Analysis of short-to-intermediate range intermolecular interactions offers a great way of characterizing the solid-state organization of small molecules and materials. This can be achieved by two-dimensional (2D) homo- and heteronuclear correlation NMR spectroscopy, for example, by carrying out experiments at high magnetic fields in conjunction with fast magic-angle spinning (MAS) techniques. But, detecting 2D peaks for heteronuclear dipolar coupled spin pairs separated by greater than 3 Å is not always straightforward, particularly when low-gamma quadrupolar nuclei are involved...
August 2022: Solid State Nuclear Magnetic Resonance
https://read.qxmd.com/read/35668169/wavelike-electronic-energy-transfer-in-donor-acceptor-molecular-systems-through-quantum-coherence
#16
JOURNAL ARTICLE
Fan-Fang Kong, Xiao-Jun Tian, Yang Zhang, Yao Zhang, Gong Chen, Yun-Jie Yu, Shi-Hao Jing, Hong-Ying Gao, Yi Luo, Jin-Long Yang, Zhen-Chao Dong, J G Hou
Quantum-coherent intermolecular energy transfer is believed to play a key role in light harvesting in photosynthesis and photovoltaics. So far, a direct, real-space demonstration of quantum coherence in donor-acceptor systems has been lacking because of the fragile quantum coherence in lossy molecular systems. Here, we precisely control the separations in well-defined donor-acceptor model systems and unveil a transition from incoherent to coherent electronic energy transfer. We monitor the fluorescence from the heterodimers with subnanometre resolution through scanning tunnelling microscopy induced luminescence...
July 2022: Nature Nanotechnology
https://read.qxmd.com/read/35067044/metal-based-linear-light-upconversion-implemented-in-molecular-complexes-challenges-and-perspectives
#17
JOURNAL ARTICLE
Hélène Bolvin, Alexandre Fürstenberg, Bahman Golesorkhi, Homayoun Nozary, Inès Taarit, Claude Piguet
ConspectusThe piling up of low-energy photons to produce light beams of higher energies while exploiting the nonlinear optical response of matter was conceived theoretically around 1930 and demonstrated 30 years later with the help of the first coherent ruby lasers. The vanishingly small efficacy of the associated light-upconversion process was rapidly overcome by the implementation of powerful successive absorptions of two photons using linear optics in materials that possess real intermediate excited states working as relays...
January 24, 2022: Accounts of Chemical Research
https://read.qxmd.com/read/35043481/evaluation-of-brown-adipose-tissue-with-intermolecular-double-quantum-coherence-magnetic-resonance-spectroscopy-at-3-0-t
#18
JOURNAL ARTICLE
Liangjie Lin, Qinhe Zhang, Nan Wang, Ke Jiang, Yanqin Lin, Zhong Chen, Qingwei Song, Ailian Liu, Jiazheng Wang
In the current study, we propose a single-voxel (SV) magnetic resonance spectroscopy (MRS) pulse sequence, based on intermolecular double-quantum coherence (iDQC), for in vivo specific assessment of brown adipose tissue (BAT) at 3 T. The multilocular adipocyte, present in BAT, typically contains a large number of small lipid droplets surrounded by abundant intracellular water, while the monolocular adipocyte, present in white adipose tissue (WAT), accommodates only a single large lipid droplet with much less water content...
January 18, 2022: NMR in Biomedicine
https://read.qxmd.com/read/34767351/coherent-spin-control-of-single-molecules-on-a-surface
#19
JOURNAL ARTICLE
Philip Willke, Tobias Bilgeri, Xue Zhang, Yu Wang, Christoph Wolf, Herve Aubin, Andreas Heinrich, Taeyoung Choi
Control of single electron spins constitutes one of the most promising platforms for spintronics, quantum sensing, and quantum information processing. Utilizing single molecular magnets as their hosts establishes an interesting framework since their molecular structure is highly flexible and chemistry-based large-scale synthesis directly provides a way toward scalability. Here, we demonstrate coherent spin manipulation of single molecules on a surface, which we control individually using a scanning tunneling microscope in combination with electron spin resonance...
November 12, 2021: ACS Nano
https://read.qxmd.com/read/34123008/conversion-between-triplet-pair-states-is-controlled-by-molecular-coupling-in-pentadithiophene-thin-films
#20
JOURNAL ARTICLE
Natalie A Pace, Brandon K Rugg, Christopher H Chang, Obadiah G Reid, Karl J Thorley, Sean Parkin, John E Anthony, Justin C Johnson
In singlet fission (SF) the initially formed correlated triplet pair state, 1 (TT), may evolve toward independent triplet excitons or higher spin states of the (TT) species. The latter result is often considered undesirable from a light harvesting perspective but may be attractive for quantum information sciences (QIS) applications, as the final exciton pair can be spin-entangled and magnetically active with relatively long room temperature decoherence times. In this study we use ultrafast transient absorption (TA) and time-resolved electron paramagnetic resonance (TR-EPR) spectroscopy to monitor SF and triplet pair evolution in a series of alkyl silyl-functionalized pentadithiophene (PDT) thin films designed with systematically varying pairwise and long-range molecular interactions between PDT chromophores...
June 22, 2020: Chemical Science
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