keyword
https://read.qxmd.com/read/38652107/a-logic-incorporated-gene-regulatory-network-deciphers-principles-in-cell-fate-decisions
#21
JOURNAL ARTICLE
Gang Xue, Xiaoyi Zhang, Wanqi Li, Lu Zhang, Zongxu Zhang, Xiaolin Zhou, Di Zhang, Lei Zhang, Zhiyuan Li
Organisms utilize gene regulatory networks (GRN) to make fate decisions, but the regulatory mechanisms of transcription factors (TF) in GRNs are exceedingly intricate. A longstanding question in this field is how these tangled interactions synergistically contribute to decision-making procedures. To comprehensively understand the role of regulatory logic in cell fate decisions, we constructed a logic-incorporated GRN model and examined its behavior under two distinct driving forces (noise-driven and signal-driven)...
April 23, 2024: ELife
https://read.qxmd.com/read/38652100/perceptual-expectations-are-reflected-by-early-alpha-power-reduction
#22
JOURNAL ARTICLE
Szabolcs Sáringer, Ágnes Fehér, Gyula Sáry, Péter Kaposvári
The predictability of a stimulus can be characterized by its transitional probability. Perceptual expectations derived from the transitional probability of the stimulus were found to modulate the early alpha oscillations in the sensory regions of the brain when neural responses to expected versus unexpected stimuli were compared. The objective of our study was to find out the extent to which this low-frequency oscillation reflects stimulus predictability. We aimed to detect the alpha-power difference with smaller differences in transitional probabilities by comparing expected stimuli with neutral ones...
April 22, 2024: Journal of Cognitive Neuroscience
https://read.qxmd.com/read/38652083/microscopic-mechanism-for-further-no-heterogeneous-reduction-by-potassium-doped-biochar-a-dft-study
#23
JOURNAL ARTICLE
Tong Hao, Lihong Wei, Jinyuan Jiang, Qian Zhou, Hui Liu
Biomass reburning is an efficient and low-cost way to control nitric oxide (NO), and the abundant potassium (K) element in biomass affects the heterogeneous reaction between NO and biochar. Due to the incomplete simulation of the NO heterogeneous reduction reaction pathway at the molecular level and the unclear catalytic effect of K element in biochar, further research is needed on the possible next reaction and the influencing mechanism of the element. After the products of the existing reaction pathways are referenced, two reasonably simplified biochar structural models are selected as the basic reactants to study the microscopic mechanism for further NO heterogeneous reduction on the biochar surface before and after doping with the K atom based on density functional theory...
April 23, 2024: Journal of Physical Chemistry. A
https://read.qxmd.com/read/38652072/investigation-of-basolateral-targeting-micelles-for-drug-delivery-applications-in-polycystic-kidney-disease
#24
JOURNAL ARTICLE
Yi Huang, Ali Osouli, Jessica Pham, Valeria Mancino, Colette O'Grady, Taranatee Khan, Baishali Chaudhuri, Nuria M Pastor-Soler, Kenneth R Hallows, Eun Ji Chung
Autosomal dominant polycystic kidney disease (ADPKD) is a complex disorder characterized by uncontrolled renal cyst growth, leading to kidney function decline. The multifaceted nature of ADPKD suggests that single-pathway interventions using individual small molecule drugs may not be optimally effective. As such, a strategy encompassing combination therapy that addresses multiple ADPKD-associated signaling pathways could offer synergistic therapeutic results. However, severe off-targeting side effects of small molecule drugs pose a major hurdle to their clinical transition...
April 23, 2024: Biomacromolecules
https://read.qxmd.com/read/38652056/giant-photoluminescence-enhancement-of-monolayer-wse-2-using-a-plasmonic-nanocavity-with-on-demand-resonance
#25
JOURNAL ARTICLE
Chenyang Li, Huan Luo, Liping Hou, Qifa Wang, Kaihui Liu, Xuetao Gan, Jianlin Zhao, Fajun Xiao
Monolayer transition metal dichalcogenides (TMDs) are considered promising building blocks for next-generation photonic and optoelectronic devices, owing to their fascinating optical properties. However, their inherent weak light absorption and low quantum yield severely hinder their practical applications. Here, we report up to 18000-fold photoluminescence (PL) enhancement in a monolayer WSe2 -coupled plasmonic nanocavity. A spectroscopy-assisted nanomanipulation technique enables the assembly of a nanocavity with customizable resonances to simultaneously enhance the excitation and emission processes...
April 23, 2024: Nano Letters
https://read.qxmd.com/read/38652053/integrated-exploration-of-epigenetic-dysregulation-reveals-a-stemness-emt-subtype-and-mmp12-linked-to-the-progression-and-prognosis-in-hepatocellular-carcinoma
#26
JOURNAL ARTICLE
Anning Zuo, Jinyu Li, Siyuan Weng, Hui Xu, Yuyuan Zhang, Libo Wang, Zhe Xing, Peng Luo, Quan Cheng, Jing Li, Xinwei Han, Zaoqu Liu
Epigenetic dysregulation drives aberrant transcriptional programs playing a critical role in hepatocellular carcinoma (HCC), which may provide novel insights into the heterogeneity of HCC. This study performed an integrated exploration on the epigenetic dysregulation of miRNA and methylation. We discovered and validated three patterns endowed with gene-related transcriptional traits and clinical outcomes. Specially, a stemness/epithelial-mesenchymal transition (EMT) subtype was featured by immune exhaustion and the worst prognosis...
April 23, 2024: Journal of Proteome Research
https://read.qxmd.com/read/38652019/rotational-order-disorder-and-spin-crossover-behaviour-in-a-neutral-iron-ii-complex-based-on-asymmetrically-substituted-large-planar-ionogenic-ligand
#27
JOURNAL ARTICLE
Maksym Seredyuk, Kateryna Znovjyak, Francisco Javier Valverde-Muñoz, M Carmen Muñoz, Igor O Fritsky, José Antonio Real
Octahedrally coordinated spin crossover (SCO) FeII complexes represent an important class of switchable molecular materials. This study presents the synthesis and characterisation of a novel complex, [FeII (ppt-2Fph)2 ]0 ·2MeOH, where ppt-2Fph is a new asymmetric ionogenic tridentate planar ligand 2-(5-(2-fluorophenyl)-4 H -1,2,4-triazol-3-yl)-6-(1 H -pyrazol-1-yl)pyridine. The complex exhibits a hysteretic thermally induced SCO transition at 285 K on cooling and at 293 K on heating, as well as light induced excited spin state trapping (LIESST) at lower temperatures with a relaxation T (LIESST) temperature of 73 K...
April 23, 2024: Dalton Transactions: An International Journal of Inorganic Chemistry
https://read.qxmd.com/read/38652011/microfluidic-sers-technologies-for-ctc-a-perspective-on-clinical-translation
#28
REVIEW
Amin Hassanzadeh-Barforoushi, Anastasiia Tukova, Audrey Nadalini, David W Inglis, Simon Chang-Hao Tsao, Yuling Wang
Enumeration and phenotypic profiling of circulating tumor cells (CTCs) provide critical information for clinical diagnosis and treatment monitoring in cancer. To achieve this goal, an integrated system is needed to efficiently isolate CTCs from patient samples and sensitively evaluate their phenotypes. Such integration would comprise a high-throughput single-cell processing unit for the isolation and manipulation of CTCs and a sensitive and multiplexed quantitation unit to detect clinically relevant signals from these cells...
April 23, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38651998/design-and-performance-analysis-of-a-mid-infrared-broadband-thermally-tunable-metamaterial-absorption-device-based-on-the-phase-change-effect
#29
JOURNAL ARTICLE
Tianquan Feng, Chenyu Gong, Shiri Liang, Zao Yi, Yuxuan Yi, Can Ma
We propose a structurally simple, innovative, and multifunctional mid-infrared broadband thermally tunable metamaterial absorption device. The absorption device consists of a three-layer structure, from bottom to top: Ti substrate, SiO2 dielectric layer, and patterned VO2 layer. Through temperature control, the average absorption intensity of the absorption device can vary between 0.08 and 0.94. The absorption device's absorption mechanism is rooted in the thermal phase-change characteristics exhibited by the topologically patterned VO2 ...
April 23, 2024: Dalton Transactions: An International Journal of Inorganic Chemistry
https://read.qxmd.com/read/38651986/detection-and-characterization-of-hydride-ligands-in-copper-complexes-by-hard-x-ray-spectroscopy
#30
JOURNAL ARTICLE
Lorena Fritsch, Pia Rehsies, Wael Barakat, Deven P Estes, Matthias Bauer
Transition metal complexes, particularly copper hydrides, play an important role in various catalytic processes and molecular inorganic chemistry. This study employs synchrotron hard X-ray spectroscopy to gain insights into the geometric and electronic properties of copper hydrides as potential catalysts for CO2 hydrogenation. The potential of high energy resolution X-ray absorption near-edge structure (HERFD-XANES) and valence-to-core X-ray emission (VtC-XES) is demonstrated with measurement on Stryker's reagent (Cu6H6) and [Cu3(μ3-H)(dpmppe)2](PF6)2 (Cu3H), alongside a non-hydride copper compound (Cu-I)...
April 23, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38651947/bright-luminescence-of-free-radical-tempo-enabled-by-electrochemiluminescence-technique
#31
JOURNAL ARTICLE
Zhengang Han, Ruirui Liu, Lijun Zhang, Jiangyun Song, Yunfeng Bai, Xiaoquan Lu
Radicals can feature theoretically 100% light utilization owing to their nonelectron spin-forbidden transition and represent the most advanced luminescent materials at present. 2,2,6,6-Tetramethyl-1-piperidinyloxy (TEMPO) acts as a typically stable radical with very broad applications. However, their luminescent properties have not been discovered to date. In the present work, we observed the bright electrochemiluminescence (ECL) emission of TEMPO with a higher efficiency (72.3%) via the electrochemistry and coreactant strategies for the first time...
April 23, 2024: Analytical Chemistry
https://read.qxmd.com/read/38651918/codelivery-of-cpt-and-siphb1-with-gsh-ros-dual-responsive-hybrid-nanoparticles-based-on-a-12-anen-3-derived-lipid-for-synergistic-lung-cancer-therapy
#32
JOURNAL ARTICLE
Ya-Xuan Liang, Xue-Yi Sun, De-Zhong Xu, Yi-Nan Gao, Quan Tang, Zhong-Lin Lu, Yang Liu
The combination of small-interfering RNA (siRNA)-mediated gene silencing and chemotherapeutic agents for lung cancer treatment has attracted widespread attention in terms of a greater therapeutic effect, minimization of systemic toxicity, and inhibition of multiple drug resistance (MDR). In this work, three amphiphiles, CBN1 - CBN3 , were first designed and synthesized as a camptothecin (CPT) conjugate and gene condensation agents by the combination of CPT prodrugs and di(triazole-[12]aneN3 ) through the ROS-responsive phenylborate ester and different lengths of alkyl chains (with 6, 9, 12 carbon chains for CBN1 - CBN3 , respectively)...
April 23, 2024: ACS Applied Bio Materials
https://read.qxmd.com/read/38651874/flexible-hydrogels-connecting-adhesion-and-wetting
#33
JOURNAL ARTICLE
A-Reum Kim, Surjyasish Mitra, Sudip Shyam, Boxin Zhao, Sushanta K Mitra
Raindrops falling on window-panes spread upon contact, whereas hail can cause dents or scratches on the same glass window upon contact. While the former phenomenon resembles classical wetting, the latter is dictated by contact and adhesion theories. The classical Young-Dupre law applies to the wetting of pure liquids on rigid solids, whereas conventional contact mechanics theories account for rigid-on-soft or soft-on-rigid contacts with small deformations in the elastic limit. However, the crossover between adhesion and wetting is yet to be fully resolved...
April 23, 2024: Soft Matter
https://read.qxmd.com/read/38651835/tuning-photoredox-catalysis-of-ruthenium-with-palladium-synthesis-of-heterobimetallic-ru-pd-complexes-that-enable-efficient-photochemical-reduction-of-co-2
#34
JOURNAL ARTICLE
Siteng Yang, Yuto Morita, Yuta Nakamura, Nobuharu Iwasawa, Jun Takaya
New Ru-Pd heterobimetallic complexes were synthesized and structurally characterized utilizing 6,6″-bis(phosphino)-2,2':6',2″-terpyridine as a scaffold for the metal-metal bond. The dicationic Ru-Pd complex was found to exhibit high catalytic activity as a photocatalyst for photochemical reduction of CO2 to CO under visible light irradiation. This study established a new design of transition metal catalysts that tune photoredox catalysis with metalloligands.
April 23, 2024: Journal of the American Chemical Society
https://read.qxmd.com/read/38651832/solution-ionic-strength-can-modulate-functional-loop-conformations-in-e-coli-dihydrofolate-reductase
#35
JOURNAL ARTICLE
C Satheesan Babu, Jih-Ying Chen, Carmay Lim
The observation of multiple conformations of a functional loop (termed M20) in the Escherichia coli dihydrofolate reductase ( ec DHFR) enzyme triggered the proposition that large-scale motions of protein structural elements contribute to enzyme catalysis. The transition of the M20 loop from a closed conformation to an occluded conformation was thought to aid the rate-limiting release of the products. However, the influence of charged species in the solution environment on the observed M20 loop conformations, independent of charged ligands bound to the enzyme, had not been considered...
April 23, 2024: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38651795/electrophotocatalysis-versus-indirect-electrolysis-electrochemical-selenocyclization-of-3-aza-1-5-dienes-facilitated-by-energy-transfer-direct-photolysis-or-n-hydroxyphthalimide
#36
JOURNAL ARTICLE
Dongyin Wang, Li Zeng, Jifu Shi, Shulin Gao, Lou Shi, Shaoguang Sun, Deqiang Liang
Three hybrid electrochemical protocols, which involve the energy transfer, direct photolysis and N-hydroxyphthalimide catalyst, respectively, are presented for the selenylation/cyclization of the fragile substrates of 3-aza-1,5-dienes with diorganyl diselenides to afford 3-selenomethyl-4-pyrrolin-2-ones. The two electrophotocatalytic reactions and the indirect electrolysis one are both regioselective and external-oxidant- and transition-metal-free, and are associated with a broad substrate scope and high Se-economy, and all three methods are amenable to gram-scale syntheses, late-stage functionalizations, sunlight-induced experiments and all-solar-driven syntheses...
April 23, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38651750/acetate-assistance-in-regioselective-hydroamination-of-allenamides-a-combined-experimental-and-density-functional-theory-study
#37
JOURNAL ARTICLE
Tapas R Pradhan, Abdikani Omar Farah, Kadiyala Sagar, Henry R Wise, Malempati Srimannarayana, Paul Ha-Yeon Cheong, Jin Kyoon Park
A key factor in the development of selective nucleophilic addition to allenamides is controlling the reactivity of electrophilic intermediates, which is generally achieved using an electrophilic activator via conjugated iminium intermediates. In this combined experimental and computational study, we show that a general and highly chemoselective hydroamination of allenamides can be accomplished using a combination of 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) and NaOAc. Experimental mechanistic studies revealed that HFIP mediates proton transfer to activate the allenamide, while the acetate additive significantly contributes to N-selective interception...
April 23, 2024: Journal of Organic Chemistry
https://read.qxmd.com/read/38651729/pd-0-catalyzed-intermolecular-methylene-c-sp-3-h-silylation-by-using-n-heterocyclic-carbene-ligands
#38
JOURNAL ARTICLE
Zhengyang Zhang, Feng Wei, Xuan Wang, Yanghui Zhang
The direct functionalization of methylene C(sp3 )-H bonds is one of the greatest challenges in transition metal-catalyzed C-H activation. Although Pd(0)-catalyzed intramolecular cyclization reactions of methylene C(sp3 )-H bonds have been reported, intermolecular functionalization remains to be discovered. Herein, we report the first example of a Pd(0)-catalyzed intermolecular methylene C(sp3 )-H functionalization reaction. By use of a N -heterocyclic carbene ligand, the methylene C(sp3 )-H bonds of 1-(benzyloxy)-2-iodobenzenes are activated and disilylated with hexamethyldisilane, affording disilylated products...
April 23, 2024: Organic Letters
https://read.qxmd.com/read/38651679/reclaiming-self-balancing-on-a-tightrope-across-time-a-grounded-theory-of-transition-to-survivorship-in-older-adult-blood-cancer-survivors
#39
JOURNAL ARTICLE
Sylvia K Wood
AIM: To develop a theoretical understanding of the transition to survivorship in older adult blood cancer survivors. DESIGN: Qualitative research employing Classic Glaserian Grounded Theory methods. METHODS: Purposive and theoretical sampling recruited 17 participants via Leukaemia & Lymphoma Society© Community webpages (65-83 years) from across the US and Canada. Data from individual semi-structured interviews using HIPPA-compliant Zoom© were analysed from September 2020 to March 2021...
April 23, 2024: Journal of Advanced Nursing
https://read.qxmd.com/read/38651669/small-intestinal-bacterial-overgrowth-in-diabetic-gastroenteropathy
#40
JOURNAL ARTICLE
Revati Varma, Subhankar Chakraborty, Duane D Burton, Kent R Bailey, Adil E Bharucha
BACKGROUND: Although diabetic gastroenteropathy (DGE) is associated with small intestinal bacterial overgrowth (SIBO), most studies have evaluated SIBO with a hydrogen breath test, which may be affected by altered transit in DGE. The risk factors for the consequences of SIBO in DGE are poorly understood. We aimed to evaluate the prevalence of, risk factors for, and gastrointestinal symptoms associated with SIBO in patients with DGE. METHODS: In 75 patients with DGE and dyspepsia, we tested for SIBO (≥105 colony forming units /mL of aerobic and/or anaerobic bacteria in a duodenal aspirate) and assessed gastric emptying (GE) of solids, symptoms during a GE study and during an enteral lipid challenge (300 kcal/2 h), and daily symptoms with a Gastroparesis Cardinal Symptom Index diary for 2 weeks...
April 23, 2024: Neurogastroenterology and Motility: the Official Journal of the European Gastrointestinal Motility Society
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