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https://www.readbyqxmd.com/read/27912765/rna-seq-based-digital-gene-expression-analysis-reveals-modification-of-host-defense-responses-by-rice-stripe-virus-during-disease-symptom-development-in-arabidopsis
#1
Feng Sun, Peng Fang, Juan Li, Linlin Du, Ying Lan, Tong Zhou, Yongjian Fan, Wenbiao Shen, Yijun Zhou
BACKGROUND: Virus infection induces and suppresses host gene expression on a global level. Rice stripe virus (RSV) is the type species of the genus Tenuivirus and infects rice and Arabidopsis plants. Microarray-based and next generation sequencing-based transcriptomic approaches have been used to study rice-RSV interactions. However, our knowledge of the response of Arabidopsis plants to RSV infection is limited, and it requires further investigation to determine the similarities (or differences) in virus-host interactions between monocot and dicot hosts infected with RSV...
December 2, 2016: Virology Journal
https://www.readbyqxmd.com/read/27911998/tropical-forest-loss-and-its-multitrophic-effects-on-insect-herbivory
#2
José Carlos Morante-Filho, Víctor Arroyo-Rodríguez, Madelon Lohbeck, Teja Tscharntke, Deborah Faria
Forest loss threatens biodiversity, but its potential effects on multitrophic ecological interactions are poorly understood. Insect herbivory depends on complex bottom-up (e.g., resource availability and plant antiherbivore defenses) and top-down forces (e.g., abundance of predators and herbivorous), but its determinants in human-altered tropical landscapes are largely unknown. Using structural equation models, we assessed the direct and indirect effects of forest loss on insect herbivory in 40 landscapes (115 ha each) from two regions with contrasting land-use change trajectories in the Brazilian Atlantic rainforest...
December 2016: Ecology
https://www.readbyqxmd.com/read/27909855/conifer-monoterpene-chemistry-during-an-outbreak-enhances-consumption-and-immune-response-of-an-eruptive-folivore
#3
Amy M Trowbridge, M Deane Bowers, Russell K Monson
Changes in the chemical composition of plant defense compounds during herbivory can impact herbivore resource allocation patterns and thereby herbivore survival, growth, and immune response against endoparasitoid infection. Few studies have investigated folivore responses to changes in plant chemistry that occur under outbreak conditions in mature conifer systems. Using data from an earlier observational field study, we carried out laboratory bioassays to test how variation in monoterpenes in piñon pine trees (Pinus edulis, Pinaceae) during an outbreak affects growth, consumption, and immune response of a specialist herbivore, the Southwestern tiger moth (Lophocampa ingens, Arctiidae)...
December 1, 2016: Journal of Chemical Ecology
https://www.readbyqxmd.com/read/27909443/mighty-dwarfs-arabidopsis-autoimmune-mutants-and-their-usages-in-genetic-dissection-of-plant-immunity
#4
REVIEW
Rowan van Wersch, Xin Li, Yuelin Zhang
Plants lack the adaptive immune system possessed by mammals. Instead they rely on innate immunity to defend against pathogen attacks. Genomes of higher plants encode a large number of plant immune receptors belonging to different protein families, which are involved in the detection of pathogens and activation of downstream defense pathways. Plant immunity is tightly controlled to avoid activation of defense responses in the absence of pathogens, as failure to do so can lead to autoimmunity that compromises plant growth and development...
2016: Frontiers in Plant Science
https://www.readbyqxmd.com/read/27909046/capping-protein-modulates-actin-remodeling-in-response-to-ros-during-plant-innate-immunity
#5
Jiejie Li, Lingyan Cao, Christopher J Staiger
Plants perceive microbe-associated molecular patterns (MAMPs) and damage-associated molecular patterns (DAMPs) to activate innate immune signaling events, such as bursts of reactive oxygen species (ROS). The actin cytoskeleton remodels during the first five minutes of innate immune signaling in Arabidopsis epidermal cells; however, the immune signals that impinge on actin cytoskeleton and its response regulators remain largely unknown. Here, we demonstrate that rapid actin remodeling upon elicitation with diverse MAMPs and DAMPs represents a conserved plant immune response...
December 1, 2016: Plant Physiology
https://www.readbyqxmd.com/read/27907856/cdna-aflp-analysis-of-transcripts-induced-in-chickpea-plants-by-tio2-nanoparticles-during-cold-stress
#6
Saeed Amini, Reza Maali-Amiri, Rahmat Mohammadi, Seyyedeh-Sanam Kazemi-Shahandashti
We evaluated the effect of TiO2 nanoparticles (NPs) on cold tolerance (CT) development in two chickpea (Cicer arietinum L.) genotypes (Sel96Th11439, cold tolerant, and ILC533, cold susceptible) by using cDNA-amplified fragment length polymorphism (cDNA-AFLP) technique during the first and sixth days of cold stress (CS) at 4 °C. Selective amplification by primer combinations generated 4200 transcript-derived fragments (TDFs) while 100 of them (2.62%) were differentially expressed. During CS, 60 differentially expressed TDFs of TiO2 NPs-treated plants were cloned and 10 of them produced successfully readable sequences...
November 22, 2016: Plant Physiology and Biochemistry: PPB
https://www.readbyqxmd.com/read/27907832/modeling-of-the-catalytic-core-of-arabidopsis-thaliana-dicer-like-4-protein-and-its-complex-with-double-stranded-rna
#7
Agnieszka Mickiewicz, Joanna Sarzyńska, Maciej Miłostan, Anna Kurzyńska-Kokorniak, Agnieszka Rybarczyk, Piotr Łukasiak, Tadeusz Kuliński, Marek Figlerowicz, Jacek Błażewicz
Plant Dicer-like proteins (DCLs) belong to the Ribonuclease III (RNase III) enzyme family. They are involved in the regulation of gene expression and antiviral defense through RNA interference pathways. A model plant, Arabidopsis thaliana encodes four DCL proteins (AtDCL1-4) that produce different classes of small regulatory RNAs. Our studies focus on AtDCL4 that processes double-stranded RNAs (dsRNAs) into 21 nucleotide trans-acting small interfering RNAs. So far, little is known about the structures of plant DCLs and the complexes they form with dsRNA...
November 17, 2016: Computational Biology and Chemistry
https://www.readbyqxmd.com/read/27905924/current-knowledge-and-perspectives-of-paenibacillus-a-review
#8
REVIEW
Elliot Nicholas Grady, Jacqueline MacDonald, Linda Liu, Alex Richman, Ze-Chun Yuan
Isolated from a wide range of sources, the genus Paenibacillus comprises bacterial species relevant to humans, animals, plants, and the environment. Many Paenibacillus species can promote crop growth directly via biological nitrogen fixation, phosphate solubilization, production of the phytohormone indole-3-acetic acid (IAA), and release of siderophores that enable iron acquisition. They can also offer protection against insect herbivores and phytopathogens, including bacteria, fungi, nematodes, and viruses...
December 1, 2016: Microbial Cell Factories
https://www.readbyqxmd.com/read/27905514/seagrass-posidonia-oceanica-seedlings-in-a-high-co2-world-from-physiology-to-herbivory
#9
Gema Hernán, Laura Ramajo, Lorena Basso, Antonio Delgado, Jorge Terrados, Carlos M Duarte, Fiona Tomas
Under future increased CO2 concentrations, seagrasses are predicted to perform better as a result of increased photosynthesis, but the effects in carbon balance and growth are unclear and remain unexplored for early life stages such as seedlings, which allow plant dispersal and provide the potential for adaptation under changing environmental conditions. Furthermore, the outcome of the concomitant biochemical changes in plant-herbivore interactions has been poorly studied, yet may have important implications in plant communities...
December 1, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27905507/discovery-of-piperonal-converting-oxidase-involved-in-the-metabolism-of-a-botanical-aromatic-aldehyde
#10
Shiori Doi, Yoshiteru Hashimoto, Chiaki Tomita, Takuto Kumano, Michihiko Kobayashi
Piperonal-catabolizing microorganisms were isolated from soil, the one (strain CT39-3) exhibiting the highest activity being identified as Burkholderia sp. The piperonal-converting enzyme involved in the initial step of piperonal metabolism was purified from strain CT39-3. Gene cloning of the enzyme and a homology search revealed that the enzyme belongs to the xanthine oxidase family, which comprises molybdoenzymes containing a molybdopterin cytosine dinucleotide cofactor. We found that the piperonal-converting enzyme acts on piperonal in the presence of O2, leading to formation of piperonylic acid and H2O2...
December 1, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27904462/overexpression-of-a-pathogenesis-related-protein-10-enhances-biotic-and-abiotic-stress-tolerance-in-rice
#11
Jingni Wu, Sang Gon Kim, Kyu Young Kang, Ju-Gon Kim, Sang-Ryeol Park, Ravi Gupta, Yong Hwan Kim, Yiming Wang, Sun Tae Kim
Pathogenesis-related proteins play multiple roles in plant development and biotic and abiotic stress tolerance. Here, we characterize a rice defense related gene named "jasmonic acid inducible pathogenesis-related class 10" (JIOsPR10) to gain an insight into its functional properties. Semi-quantitative RT-PCR analysis showed up-regulation of JIOsPR10 under salt and drought stress conditions. Constitutive over-expression JIOsPR10 in rice promoted shoot and root development in transgenic plants, however, their productivity was unaltered...
December 2016: Plant Pathology Journal
https://www.readbyqxmd.com/read/27900506/arabidopsis-thaliana-methionine-sulfoxide-reductase-b8-influences-stress-induced-cell-death-and-effector-triggered-immunity
#12
Shweta Roy, Ashis Kumar Nandi
Reactive oxygen species (ROS) oxidize methionine to methionine sulfoxide (MetSO) and thereby inactivate proteins. Methionine sulfoxide reductase (MSR) enzyme converts MetSO back to the reduced form and thereby detoxifies the effect of ROS. Our results show that Arabidopsis thaliana MSR enzyme coding gene MSRB8 is required for effector-triggered immunity and containment of stress-induced cell death in Arabidopsis. Plants activate pattern-triggered immunity (PTI), a basal defense, upon recognition of evolutionary conserved molecular patterns present in the pathogens...
November 29, 2016: Plant Molecular Biology
https://www.readbyqxmd.com/read/27899932/a-wheat-cinnamyl-alcohol-dehydrogenase-tacad12-contributes-to-host-resistance-to-the-sharp-eyespot-disease
#13
Wei Rong, Meiying Luo, Tianlei Shan, Xuening Wei, Lipu Du, Huijun Xu, Zengyan Zhang
Sharp eyespot, caused mainly by the necrotrophic fungus Rhizoctonia cerealis, is a destructive disease in hexaploid wheat (Triticum aestivum L.). In Arabidopsis, certain cinnamyl alcohol dehydrogenases (CADs) have been implicated in monolignol biosynthesis and in defense response to bacterial pathogen infection. However, little is known about CADs in wheat defense responses to necrotrophic or soil-borne pathogens. In this study, we isolate a wheat CAD gene TaCAD12 in response to R. cerealis infection through microarray-based comparative transcriptomics, and study the enzyme activity and defense role of TaCAD12 in wheat...
2016: Frontiers in Plant Science
https://www.readbyqxmd.com/read/27898839/ap2-erf-transcription-factors-involved-in-response-to-tomato-yellow-leaf-curly-virus-in-tomato
#14
Ying Huang, Bao-Long Zhang, Sheng Sun, Guo-Ming Xing, Feng Wang, Meng-Yao Li, Yong-Sheng Tian, Ai-Sheng Xiong
Tomato yellow leaf curly virus (TYLCV), transmitted by the whitefly (), causes leaf curling and yellowing, plant dwarfism, and growth inhibition in tomato ( L.). The APETALA2 (AP2) and ethylene response factor (ERF) transcription factor (TF) family, the largest plant-specific TF family, was identified to function in plant development and pathogen defense. Our study aimed to analyze the mechanism underlying the function of ERF (SlERF) TFs in response to TYLCV infection and improve useful information to increase the resistance to TYLCV in tomato...
July 2016: Plant Genome
https://www.readbyqxmd.com/read/27898830/endoplasmic-reticulum-body-related-gene-expression-in-different-root-zones-of-arabidopsis-isolated-by-laser-assisted-microdissection
#15
Maxime Gotté, Magalie Bénard, Marie-Christine Kiefer-Meyer, Rim Jaber, John P Moore, Maïté Vicré-Gibouin, Azeddine Driouich
Endoplasmic reticulum (ER) bodies are important organelles for root defense. However, little is known regarding the genetic control of their formation in root tissues. In the present study, (L.) Heynh. roots were dissected using laser-assisted microdissection (LAM) with minimal sample preparation (no fixation or embedding steps) and the expression of genes associated with ER body formation and function was assessed by real-time quantitative reverse-transcription polymerase chain reaction (RT-qRT-PCR) in the presence and absence of the defense phytohormone methyl jasmonate (MeJA)...
July 2016: Plant Genome
https://www.readbyqxmd.com/read/27898803/identification-and-expression-profiling-of-the-lectin-gene-superfamily-in-mulberry
#16
Bushra Saeed, Vinay K Baranwal, Paramjit Khurana
Lectins are a diverse group of ubiquitously present, highly specific sugar-binding proteins. Members of this large gene family have been assigned broad biological functions from defense to acting as storage proteins. Despite possessing several interesting characteristics, their functions remain essentially undefined. Mulberry ( spp.) known for its medicinal benefits is also a rich source of lectins. Using an exhaustive hidden Markov model (HMM)-based search, we identified the lectin gene complement in C.K. Schneid with around 197 members...
July 2016: Plant Genome
https://www.readbyqxmd.com/read/27896555/methyl-jasmonate-induced-monoterpenes-in-scots-pine-and-norway-spruce-tissues-affect-pine-weevil-orientation
#17
Lina Lundborg, Göran Nordlander, Niklas Björklund, Henrik Nordenhem, Anna-Karin Borg-Karlson
In large parts of Europe, insecticide-free measures for protecting conifer plants are desired to suppress damage by the pine weevil Hylobius abietis (L.). Treatment with methyl jasmonate (MeJA), a chemical elicitor already used in crop production, may enhance expression of chemical defenses in seedlings in conifer regenerations. However, in a previous experiment, MeJA treatment resulted in substantially better field protection for Scots pine (Pinus sylvestris L.) than for Norway spruce (Picea abies (L.) Karst...
November 28, 2016: Journal of Chemical Ecology
https://www.readbyqxmd.com/read/27895649/-omics-and-plant-responses-to-botrytis-cinerea
#18
REVIEW
Synan F AbuQamar, Khaled Moustafa, Lam-Son P Tran
Botrytis cinerea is a dangerous plant pathogenic fungus with wide host ranges. This aggressive pathogen uses multiple weapons to invade and cause serious damages on its host plants. The continuing efforts of how to solve the "puzzle" of the multigenic nature of B. cinerea's pathogenesis and plant defense mechanisms against the disease caused by this mold, the integration of omic approaches, including genomics, transcriptomics, proteomics and metabolomics, along with functional analysis could be a potential solution...
2016: Frontiers in Plant Science
https://www.readbyqxmd.com/read/27895647/exogenous-trehalose-treatment-enhances-the-activities-of-defense-related-enzymes-and-triggers-resistance-against-downy-mildew-disease-of-pearl-millet
#19
Sharathchandra R Govind, Sudisha Jogaiah, Mostafa Abdelrahman, Hunthrike S Shetty, Lam-Son P Tran
In recent years, diverse physiological functions of various sugars are the subject of investigations. Their roles in signal transduction in plant responses to adverse biotic and abiotic stress conditions have become apparent, and growing scientific evidence has indicated that disaccharides like sucrose and trehalose mediate plant defense responses in similar way as those induced by elicitors against the pathogens. Trehalose is a well-known metabolic osmoregulator, stress-protectant and non-reducing disaccharide existing in a variety of organisms, including fungi, bacteria, and plants...
2016: Frontiers in Plant Science
https://www.readbyqxmd.com/read/27895225/loss-of-inositol-phosphorylceramide-sphingolipid-mannosylation-induces-plant-immune-responses-and-reduces-cellulose-content-in-arabidopsis
#20
Lin Fang, Toshiki Ishikawa, Emilie A Rennie, Gosia M Murawska, Jeemeng Lao, Jingwei Yan, Alex Yl Tsai, Edward E K Baidoo, Jun Xu, Jay D Keasling, Taku Demura, Maki Kawai-Yamada, Henrik Vibe Scheller, Jenny C Mortimer
Glycosylinositol phosphorylceramides (GIPCs) are a class of glycosylated sphingolipids found in plants, fungi, and protozoa. These lipids are abundant in the plant plasma membrane, forming ~25% of total plasma membrane lipids. Little is known about the function of the glycosylated headgroup, but two recent studies have indicated that they play a key role in plant signaling and defense. Here, we show that a member of glycosyltransferase (GT) family 64, previously named ECTOPICALLY PARTING CELLS1 (EPC1), is likely a Golgi-localized GIPC-specific mannosyl-transferase, which we renamed GIPC MANNOSYL-TRANSFERASE1 (GMT1)...
November 28, 2016: Plant Cell
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