keyword
https://read.qxmd.com/read/36950078/controllable-dna-nanodevices-regulated-by-logic-gates-for-multi-stimulus-recognition
#21
JOURNAL ARTICLE
Yingxin Hu, Yufeng Jia, Yuefei Yang, Yanjun Liu
DNA biosensors have attracted considerable attention due to their great potential in environmental monitoring and medical diagnosis. Despite the great achievements, the single function and uncontrollability of the sensors restrict their further application. Therefore, it is necessary to construct controllable nanodevices with both sensing and responding capabilities to external stimuli. Herein, we develop a strategy to engineer structure-switching biosensors which can respond to external stimuli while preserving the sensing capability...
March 14, 2023: RSC Advances
https://read.qxmd.com/read/36748376/comparative-molecular-analysis-of-oral-submucous-fibrosis-and-other-organ-fibrosis-based-on-weighted-gene-co-expression-network-analysis
#22
JOURNAL ARTICLE
Jun Chen, Binjie Liu, Xiaoli Xie, Wenjie Li
OBJECTIVES: There is currently a lack of economic and suitable animal models that can accurately recapitulate the oral submucous fibrosis (OSF) disease state for indepth study. This is one of the primary reasons for the limited therapeutic methods available for OSF. Based on the underlying logic of pan-cancer analysis, this study systematically compares OSF and the other four types of organ fibrosis from the aspects of molecules, signaling pathways, biological processes, etc. A comprehensive analysis of the similarities and differences between OSF and other organ fibrosis is helpful for researchers to discover some general rules of fibrosis disease and may provide new ideas for studying OSF...
December 28, 2022: Zhong Nan da Xue Xue Bao. Yi Xue Ban, Journal of Central South University. Medical Sciences
https://read.qxmd.com/read/36563828/querying-semantic-catalogues-of-biomedical-databases
#23
JOURNAL ARTICLE
Arnaldo Pereira, João Rafael Almeida, Rui Pedro Lopes, José Luís Oliveira
BACKGROUND: Secondary use of health data is a valuable source of knowledge that boosts observational studies, leading to important discoveries in the medical and biomedical sciences. The fundamental guiding principle for performing a successful observational study is the research question and the approach in advance of executing a study. However, in multi-centre studies, finding suitable datasets to support the study is challenging, time-consuming, and sometimes impossible without a deep understanding of each dataset...
December 20, 2022: Journal of Biomedical Informatics
https://read.qxmd.com/read/36434585/an-e-consent-framework-for-tiered-informed-consent-for-human-genomic-research-in-the-global-south-implemented-as-a-redcap-template
#24
JOURNAL ARTICLE
Tsaone Tamuhla, Nicki Tiffin, Taryn Allie
Research involving human participants requires their consent, and it is common practice to capture consent information on paper and store those hard copies, presenting issues such as long-term storage requirements, inefficient retrieval of consent forms for reference or future use, and the potential for transcription errors when transcribing captured informed consent. There have been calls to move to electronic capture of the consent provided by research participants (e-consent) as a way of addressing these issues...
November 24, 2022: BMC Medical Ethics
https://read.qxmd.com/read/36407685/a-critical-appraisal-of-the-new-competency-based-medical-undergraduate-curriculum-in-biochemistry
#25
REVIEW
Sucheta P Dandekar, Farzana Mahdi, Thomas V Chacko
UNLABELLED: The new competency-based medical education undergraduate curriculum (CBMC) was launched for the 2019 admission batch of MBBS students. The programme is designed to create an "Indian Medical Graduate" (IMG) possessing the requisite knowledge, skills, attitudes, values and responsiveness, so that the graduate may function appropriately and effectively as a physician of first contact with the community while being globally relevant. Given that implementation of this curriculum is still in its infancy across the country, we stand to gain from a unified approach to its implementation...
November 10, 2022: Indian Journal of Clinical Biochemistry: IJCB
https://read.qxmd.com/read/36347140/use-of-an-open-source-electronic-health-record-to-establish-a-virtual-hospital-a-tale-of-two-curricula
#26
JOURNAL ARTICLE
Stephanie Medlock, Kim J Ploegmakers, Ronald Cornet, Kim Win Pang
BACKGROUND: The electronic health record (EHR) is central to medical informatics. Its use is also recognized as an important skill for future clinicians. Typically, medical students' first exposure to an EHR is when they start their clinical internships, and medical informatics students may or may not get experience with an EHR before graduation. We describe the process of implementing an open-source EHR in two curricula: Medicine and Medical informatics. For medical students, the primary goals were to allow students to practice analyzing information from the EHR, creating therapeutic plans, and communicating with their colleagues via the EHR before they start their first clinical rotations...
October 30, 2022: International Journal of Medical Informatics
https://read.qxmd.com/read/36314305/swept-source-endoscopic-optical-coherence-tomography-real-time-imaging-system-based-on-gpu-acceleration-for-axial-megahertz-high-speed-scanning
#27
JOURNAL ARTICLE
J Lyu, L Ren, Q-Y Liu, Y Wang, Z-Q Zhou, Y-Y Chen, H-B Jia, Y-G Tang, M Li
OBJECTIVE:   In order to solve the problem of image real-time processing and correction for high-speed endoscopic swept-source optical coherence tomography (SS-OCT), we highly optimize a computer-unified device architecture-based platform and use a field-programmable gate array to summarize the application experience. MATERIALS AND METHODS: We use the Half-Sync/Half-Asyn mode to optimize memory in order to build a high-throughput data thread pool for CPU. We use asynchronous streaming architecture to multiplex multiple threads at high speed to accelerate data processing...
October 2022: European Review for Medical and Pharmacological Sciences
https://read.qxmd.com/read/36212203/normal-tissue-risk-estimation-using-biological-knowledge-based-fuzzy-logic-in-volumetric-modulated-arc-therapy-of-prostate-cancer-rectum
#28
JOURNAL ARTICLE
Santosh Kumar Patnaikuni, Sapan Mohan Saini, Rakesh Mohan Chandola, Pradeep Chandrakar, Vivek Chaudhary
Objective: Most radiotherapy patients with prostate cancer are treated with volumetric modulated arc therapy (VMAT). Advantages of VMAT may be limited by daily treatment uncertainties such as setup errors, internal organ motion, and deformation. The position and shape of prostate target as well as normal organ, i.e., rectum volume around the target, may change during the course of treatment. The aim of the present work is to estimate rectal toxicity estimation using a novel two-level biological knowledge-based fuzzy logic method...
April 2022: Journal of Medical Physics
https://read.qxmd.com/read/36121946/jointly-fusing-multi-scale-spatial-logical-brain-networks-a-neural-decoding-method
#29
JOURNAL ARTICLE
Ziyu Li, Zhiyuan Zhu, Qing Li, Xia Wu
Functional magnetic resonance imaging (fMRI) is a methodology for measuring human brain activities. It has become more and more popular in neural decoding due to its noninvasive. Neural decoding aims to establishing models to reconstruct external stimuli or features of stimuli from known brain responses, so that we can understand the principles of brain functions such as emotion, cognition and language. Neural decoding based on fMRI is of great significance for further understanding the mechanism of brain operation...
September 19, 2022: IEEE Journal of Biomedical and Health Informatics
https://read.qxmd.com/read/36120403/brain-tumor-segmentation-using-hierarchical-combination-of-fuzzy-logic-and-cellular-automata
#30
JOURNAL ARTICLE
Roqaie Kalantari, Roqaie Moqadam, Nazila Loghmani, Armin Allahverdy, Mohammad Bagher Shiran, Arash Zare-Sadeghi
Background: Magnetic resonance (MR) image is one of the most important diagnostic tools for brain tumor detection. Segmentation of glioma tumor region in brain MR images is challenging in medical image processing problems. Precise and reliable segmentation algorithms can be significantly helpful in the diagnosis and treatment planning. Methods: In this article, a novel brain tumor segmentation method is introduced as a postsegmentation module, which uses the primary segmentation method's output as input and makes the segmentation performance values better...
July 2022: Journal of Medical Signals and Sensors
https://read.qxmd.com/read/35916868/impact-of-health-and-lifestyle-food-supplements-on-periodontal-tissues-and-health
#31
REVIEW
Axel Spahr, Tihana Divnic-Resnik
According to the new classification, periodontitis is defined as a chronic multifactorial inflammatory disease associated with dysbiotic biofilms and characterized by progressive destruction of the tooth-supporting apparatus. This definition, based on the current scientific evidence, clearly indicates and emphasizes, beside the microbial component dental biofilm, the importance of the inflammatory reaction in the progressive destruction of periodontal tissues. The idea to modulate this inflammatory reaction in order to decrease or even cease the progressive destruction was, therefore, a logical consequence...
October 2022: Periodontology 2000
https://read.qxmd.com/read/35873192/co-occurrence-patterns-in-diagnostic-data
#32
JOURNAL ARTICLE
Marie Ely Piceno, Laura Rodríguez-Navas, José Luis Balcázar
We demonstrate how graph decomposition techniques can be employed for the visualization of hierarchical co-occurrence patterns between medical data items. Our research is based on Gaifman graphs (a mathematical concept introduced in Logic), on specific variants of this concept, and on existing graph decomposition notions, specifically, graph modules and the clan decomposition of so-called 2-structures. The construction of the Gaifman graphs from a dataset is based on co-occurrence, or lack of it, of items in the dataset...
November 2021: Computational Intelligence
https://read.qxmd.com/read/35817979/in-vivo-dissection-of-a-clustered-ctcf-domain-boundary-reveals-developmental-principles-of-regulatory-insulation
#33
JOURNAL ARTICLE
Chiara Anania, Rafael D Acemel, Johanna Jedamzick, Adriano Bolondi, Giulia Cova, Norbert Brieske, Ralf Kühn, Lars Wittler, Francisca M Real, Darío G Lupiáñez
Vertebrate genomes organize into topologically associating domains, delimited by boundaries that insulate regulatory elements from nontarget genes. However, how boundary function is established is not well understood. Here, we combine genome-wide analyses and transgenic mouse assays to dissect the regulatory logic of clustered-CCCTC-binding factor (CTCF) boundaries in vivo, interrogating their function at multiple levels: chromatin interactions, transcription and phenotypes. Individual CTCF binding site (CBS) deletions revealed that the characteristics of specific sites can outweigh other factors such as CBS number and orientation...
July 2022: Nature Genetics
https://read.qxmd.com/read/35737439/personalized-recommendations-for-physical-activity-e-coaching-ontorecomodel-ontological-modeling
#34
JOURNAL ARTICLE
Ayan Chatterjee, Andreas Prinz
BACKGROUND: Automatic e-coaching may motivate individuals to lead a healthy lifestyle with early health risk prediction, personalized recommendation generation, and goal evaluation. Multiple studies have reported on uninterrupted and automatic monitoring of behavioral aspects (such as sedentary time, amount, and type of physical activity); however, e-coaching and personalized feedback techniques are still in a nascent stage. Current intelligent coaching strategies are mostly based on the handcrafted string messages that rarely individualize to each user's needs, context, and preferences...
June 23, 2022: JMIR Medical Informatics
https://read.qxmd.com/read/35673180/exploration-of-the-decision-model-and-notation-dmn-standard-for-representation-of-knowledge-bases-encoded-in-the-arden-syntax
#35
JOURNAL ARTICLE
Robert A Jenders
CONTEXT: Arden Syntax encodes knowledge as Medical Logic Modules (MLMs). Current work involves improvement of its representation of business processes. OBJECTIVE: Assess how DMN can represent decision-making in MLMs. METHOD: A sample of 340 MLMs was tabulated for DMN representation. RESULT: While DMN can represent all MLMs at the decision requirements level, some are not supported at the decision logic level. CONCLUSION: DMN facilitates representation of business processes but would not address all decision logic...
June 6, 2022: Studies in Health Technology and Informatics
https://read.qxmd.com/read/35645354/alternative-options-for-complex-recurrent-pain-states-using-cannabinoids-psilocybin-and-ketamine-a-narrative-review-of-clinical-evidence
#36
REVIEW
Amber N Edinoff, Juliana M Fort, Christina Singh, Sarah E Wagner, Jessica R Rodriguez, Catherine A Johnson, Elyse M Cornett, Kevin S Murnane, Adam M Kaye, Alan D Kaye
With emerging information about the potential for morbidity and reduced life expectancy with long-term use of opioids, it is logical to evaluate nonopioid analgesic treatments to manage pain states. Combinations of drugs can provide additive and/or synergistic effects that can benefit the management of pain states. In this regard, tetrahydrocannabinol (THC) and cannabidiol (CBD) modulate nociceptive signals and have been studied for chronic pain treatment. Psilocybin, commonly known as "magic mushrooms", works at the serotonin receptor, 5-HT2A ...
May 18, 2022: Neurology International
https://read.qxmd.com/read/35462698/development-and-validation-of-an-automatic-system-for-intracerebral-hemorrhage-medical-text-recognition-and-treatment-plan-output
#37
JOURNAL ARTICLE
Bo Deng, Wenwen Zhu, Xiaochuan Sun, Yanfeng Xie, Wei Dan, Yan Zhan, Yulong Xia, Xinyi Liang, Jie Li, Quanhong Shi, Li Jiang
The main purpose of the study was to explore a reliable way to automatically handle emergency cases, such as intracerebral hemorrhage (ICH). Therefore, an artificial intelligence (AI) system, named, H-system, was designed to automatically recognize medical text data of ICH patients and output the treatment plan. Furthermore, the efficiency and reliability of the H-system were tested and analyzed. The H-system, which is mainly based on a pretrained language model Bidirectional Encoder Representations from Transformers (BERT) and an expert module for logical judgment of extracted entities, was designed and founded by the neurosurgeon and AI experts together...
2022: Frontiers in Aging Neuroscience
https://read.qxmd.com/read/35411741/-core-architecture-and-clinical-application-of-orthopedic-robot-based-on-human-like-thinking
#38
JOURNAL ARTICLE
Hui Yang, Kai Hu, Jiansong Xia, Wenwu Zhu, Ting Yang
Intelligent and precision medical treatment is the future development trend of surgical operations. We proposed a core architecture of orthopedic robots with human-like thinking based on the growing demand for orthopedic robots and disadvantages of current robots, it consists of brain, eyes and hands three modules according to functions. The architecture design is extremely in line with the doctor's logic so that the work process of the orthopedic robot is similar to the process of traditional surgery which is mainly done by the doctor's brain-eye-hand coordination...
March 30, 2022: Zhongguo Yi Liao Qi Xie za Zhi, Chinese Journal of Medical Instrumentation
https://read.qxmd.com/read/35127117/integration-of-new-digital-antenatal-care-tools-using-the-who-smart-guideline-approach-experiences-from-rwanda-and-zambia
#39
JOURNAL ARTICLE
Rosemary Muliokela, Gilbert Uwayezu, Candide Tran Ngoc, María Barreix, Tigest Tamrat, Andrew Kashoka, Caren Chizuni, Muyereka Nyirenda, Natschja Ratanaprayul, Sarai Malumo, Vincent Mutabazi, Garrett Mehl, Edith Munyana, Felix Sayinzoga, Özge Tunçalp
OBJECTIVES: Digital tools for decision-support and health records can address the protracted process of guideline adoption at local levels and accelerate countries' implementation of new health policies and programmes. World Health Organization (WHO) launched the SMART Guidelines approach to support the uptake of clinical, public health, and data recommendations within digital systems. SMART guidelines are a package of tools that include Digital Adaptation Kits (DAKs), which distill WHO guidelines into a format that facilitates translation into digital systems...
January 2022: Digital Health
https://read.qxmd.com/read/35061244/ensemble-learning-and-tensor-regularization-for-cone-beam-computed-tomography-based-pelvic-organ-segmentation
#40
JOURNAL ARTICLE
Hanyue Zhou, Minsong Cao, Yugang Min, Stephanie Yoon, Amar Kishan, Dan Ruan
PURPOSE: Cone-beam computed tomography (CBCT) is a widely accessible low-dose imaging approach compatible with on-table patient anatomy observation for radiotherapy. However, its use in comprehensive anatomy monitoring is hindered by low contrast and low signal-to-noise ratio and a large presence of artifacts, resulting in difficulty in identifying organ and structure boundaries either manually or automatically. In this study, we propose and develop an ensemble deep-learning model to segment post-prostatectomy organs automatically...
January 21, 2022: Medical Physics
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