keyword
https://read.qxmd.com/read/38428540/study-found-increasing-use-of-core-outcome-sets-in-cochrane-systematic-reviews-and-identified-facilitators-and-barriers
#1
JOURNAL ARTICLE
Ian J Saldanha, Karen L Hughes, Susanna Dodd, Toby Lasserson, Jamie J Kirkham, Yuhui Wu, Samuel W Lucas, Paula R Williamson
OBJECTIVES: In 2019, only 7% of Cochrane systematic reviews (SRs) cited a core outcome set (COS) in relation to choosing outcomes, even though a relevant COS existed but was not mentioned (or cited) for a further 29% of SRs. Our objectives for the current work were to (1) examine the extent to which authors are currently considering COS to inform outcome choice in Cochrane protocols and completed SRs, and (2) understand author facilitators and barriers to using COS. STUDY DESIGN AND SETTING: We examined all completed Cochrane SRs published in the last 3 months of 2022 and all Cochrane protocols published in 2022 for the extent to which they: (a) cited a COS, (b) searched for COS, (c) used outcomes from existing COS, and (d) reported outcome inconsistency among included studies and/or noted the need for COS...
February 28, 2024: Journal of Clinical Epidemiology
https://read.qxmd.com/read/38198203/the-effect-of-cation-size-on-structure-and-properties-of-ba-based-tetragonal-tungsten-bronzes-ba-4-m-2-nb-10-o-30-m-na-k-or-rb-and-ba-4-m-2-nb-8-ti-2-o-30-m-ca-or-sr
#2
JOURNAL ARTICLE
Nora Statle Løndal, Benjamin Albert Dobson Williamson, Julian Walker, Mari-Ann Einarsrud, Tor Grande
The second largest family of oxide ferroelectrics, after perovskites, are the tetragonal tungsten bronzes (TTB) with the general formula A24 A12 C4 B12 B28 O30 . Cation disorder in TTBs is known to occur if the size difference between cations is small, but the impact of cation disorder on structure and properties has not yet been extensively addressed. In this study we investigate the effect of the size of the M cation, including cation disorder, on the crystal structure and dielectric properties in the two series Ba4 M2 Nb10 O30 (BMN, A = Na, K and Rb) and Ba4 M2 Nb8 Ti2 O30 (BMNT, M = Ca, Sr)...
January 10, 2024: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/37614787/determination-of-the-crystalline-size-of-hexagonal-la-1-x-sr-x-mno-3-x-0-3-nanoparticles-from-x-ray-diffraction-a-comparative-study
#3
JOURNAL ARTICLE
Do Hung Manh, Tran Thi Ngoc Nha, Le Thi Hong Phong, Pham Hong Nam, Tran Dang Thanh, Pham Thanh Phong
The electronic, magnetic, optical and elastic properties of nanomaterials are governed partially by the crystallite size and crystal defects. Here, the crystalline size of hexagonal La1- x Sr x MnO3 ( x = 0.3) nanoparticles was determined using various methods. Single-phase La0.7 Sr0.3 MnO3 nanopowders were produced after 10 h of milling in a commercial high-energy SPEX 8000D shaker mill, and then they were heated at 700 °C and 800 °C to study the effect of calcined temperature on the crystallization of nanoparticles...
August 21, 2023: RSC Advances
https://read.qxmd.com/read/37593806/the-effect-of-occlusion-location-and-technique-in-mechanical-thrombectomy-for-minor-stroke
#4
JOURNAL ARTICLE
Isaac Josh Abecassis, Eyad Almallouhi, Reda M Chalhoub, Ahmed Helal, Janki R Naidugari, Sami Al Kasab, Eric Bass, Dale Ding, Vasu Saini, Joshua D Burks, Ilko L Maier, Pascal Jabbour, Joon-Tae Kim, Stacey Wolfe, Ansaar Rai, Marios-Nikos Psychogios, Edgar Samaniego, Adam S Arthur, Shinichi Yoshimura, Brian Howard, Ali Alawieh, Isabel Fragata, Hugo Cuellar, Adam Polifka, Justin Mascitelli, Joshua Osbun, Roberto Crosa, Charles Matouk, Min S Park, Michael R Levitt, Travis Dumont, Richard W Williamson, Alejandro M Spiotta, Robert M Starke
INTRODUCTION: Endovascular mechanical thrombectomy (MT) is an established treatment for large vessel occlusion strokes with a National Institutes of Health Stroke Scale (NIHSS) score of 6 or higher. Data pertaining to minor strokes, medium, or distal vessel occlusions, and most effective MT technique is limited and controversial. METHODS: A multicenter retrospective study of all patients treated with MT presenting with NIHSS score of 5 or less at 29 comprehensive stroke centers...
August 18, 2023: Interventional Neuroradiology
https://read.qxmd.com/read/37428051/al4gap-active-learning-workflow-for-generating-dft-scan-accurate-machine-learning-potentials-for-combinatorial-molten-salt-mixtures
#5
JOURNAL ARTICLE
Jicheng Guo, Vanessa Woo, David A Andersson, Nathaniel Hoyt, Mark Williamson, Ian Foster, Chris Benmore, Nicholas E Jackson, Ganesh Sivaraman
Machine learning interatomic potentials have emerged as a powerful tool for bypassing the spatiotemporal limitations of ab initio simulations, but major challenges remain in their efficient parameterization. We present AL4GAP, an ensemble active learning software workflow for generating multicomposition Gaussian approximation potentials (GAP) for arbitrary molten salt mixtures. The workflow capabilities include: (1) setting up user-defined combinatorial chemical spaces of charge neutral mixtures of arbitrary molten mixtures spanning 11 cations (Li, Na, K, Rb, Cs, Mg, Ca, Sr, Ba and two heavy species, Nd, and Th) and 4 anions (F, Cl, Br, and I), (2) configurational sampling using low-cost empirical parameterizations, (3) active learning for down-selecting configurational samples for single point density functional theory calculations at the level of Strongly Constrained and Appropriately Normed (SCAN) exchange-correlation functional, and (4) Bayesian optimization for hyperparameter tuning of two-body and many-body GAP models...
July 14, 2023: Journal of Chemical Physics
https://read.qxmd.com/read/36825312/analysis-of-cotton-leafroll-dwarf-virus-p0-gene-sequences-from-south-carolina-reveals-low-variability-among-isolates
#6
JOURNAL ARTICLE
William Walker Spivey, Zachary L Williamson, Jacob Seiter, Peter Abrahamian, Hehe Wang, Jeremy Greene, Elizabeth Cieniewicz
Cotton leafroll dwarf virus (CLRDV) is emerging across the major cotton-producing states of the southern United States. Because it was detected in nearly all cotton-producing states within a few years of its initial detection in the United States, spread of the virus has apparently occurred rapidly. In this study spanning three growing seasons in South Carolina, we collected CLRDV isolates from symptomatic and asymptomatic cotton plants in ten counties. The genomic region encoding P0, the viral suppressor of RNA silencing, was sequenced and compared among CLRDV isolates...
February 23, 2023: Plant Disease
https://read.qxmd.com/read/36765136/a-framework-for-evaluating-the-performance-of-smlm-cluster-analysis-algorithms
#7
JOURNAL ARTICLE
Daniel J Nieves, Jeremy A Pike, Florian Levet, David J Williamson, Mohammed Baragilly, Sandra Oloketuyi, Ario de Marco, Juliette Griffié, Daniel Sage, Edward A K Cohen, Jean-Baptiste Sibarita, Mike Heilemann, Dylan M Owen
Single-molecule localization microscopy (SMLM) generates data in the form of coordinates of localized fluorophores. Cluster analysis is an attractive route for extracting biologically meaningful information from such data and has been widely applied. Despite a range of cluster analysis algorithms, there exists no consensus framework for the evaluation of their performance. Here, we use a systematic approach based on two metrics to score the success of clustering algorithms in simulated conditions mimicking experimental data...
February 2023: Nature Methods
https://read.qxmd.com/read/36346130/glycolysis-regulates-neuronal-excitability-via-lactate-receptor-hca1r
#8
JOURNAL ARTICLE
Daria Skwarzynska, Huayu Sun, John Williamson, Izabela Kasprzak, Jaideep Kapur
Repetitively firing neurons during seizures accelerate glycolysis to meet energy demand, which leads to the accumulation of extracellular glycolytic by-product lactate. Here, we demonstrate that lactate rapidly modulates neuronal excitability in times of metabolic stress via the hydroxycarboxylic acid receptor type 1 (HCA1R) to modify seizure activity. The extracellular lactate concentration, measured by a biosensor, rose quickly during brief and prolonged seizures. In two epilepsy models, mice lacking HCA1R (lactate receptor) were more susceptible to developing seizures...
November 8, 2022: Brain
https://read.qxmd.com/read/35726678/corm-3-induces-dna-damage-through-ru-ii-binding-to-dna
#9
JOURNAL ARTICLE
Rhiannon F Lyon, Hannah M Southam, Clare Trevitt, Chunyan Liao, Sherif El-Khamisy, Robert K Poole, Mike P Williamson
When the "CO-releasing molecule-3", CORM-3 (Ru(CO)3Cl(glycinate)) is dissolved in water it forms a range of ruthenium complexes. These are taken up by cells and bind to intracellular ligands, notably thiols such as cysteine and glutathione, where the Ru(II) reaches high intracellular concentrations. Here, we show that the Ru(II) ion also binds to DNA, at exposed guanosine N7 positions. It therefore has a similar cellular target to the anticancer drug cisplatin, but not identical, because Ru(II) shows no evidence of forming intramolecular crossbridges in the DNA...
June 21, 2022: Biochemical Journal
https://read.qxmd.com/read/34506919/doppler-mean-gradient-is-discordant-to-aortic-valve-calcium-scores-in-patients-with-atrial-fibrillation-undergoing-transcatheter-aortic-valve-replacement
#10
JOURNAL ARTICLE
Adham K Alkurashi, Sorin V Pislaru, Jeremy J Thaden, Jeremy D Collins, Thomas A Foley, Kevin L Greason, Mackram F Eleid, Gurpreet S Sandhu, Mohamad A Alkhouli, Samuel J Asirvatham, Yong-Mei Cha, Eric E Williamson, Juan A Crestanello, Patricia A Pellikka, Jae K Oh, Vuyisile T Nkomo
BACKGROUND: Doppler mean gradient (MG) may underestimate aortic stenosis (AS) severity when obtained during atrial fibrillation (AF) because of lower forward flow compared to sinus rhythm (SR). Whether AS is more advanced at the time of referral to aortic valve intervention in AF compared to SR is unknown. The aim of this study was to examine flow-independent computed tomography aortic valve calcium scores (AVCS) and their concordance to MG in AF versus SR in patients undergoing transcatheter aortic valve replacement (TAVR)...
September 7, 2021: Journal of the American Society of Echocardiography
https://read.qxmd.com/read/33974970/more-than-half-of-systematic-reviews-have-relevant-core-outcome-sets
#11
REVIEW
Ian J Saldanha, Susanna Dodd, Sarah L Gorst, Paula R Williamson
OBJECTIVES: Using recent systematic reviews (SRs), our objectives were to: (1) develop a framework to assess whether a given COS is relevant to the scope of a SR; (2) examine the proportion of SRs for which relevant COS exist; and (3) for SRs for which COS exist, examine the extent to which outcomes in the COS and outcomes in the SR match. STUDY DESIGN AND SETTING: We included a sample of SRs published by the Agency for Healthcare Research and Quality Evidence-based Practice Center Program between January 1, 2018 and October 12, 2020...
August 2021: Journal of Clinical Epidemiology
https://read.qxmd.com/read/32331796/is-there-outcome-reporting-heterogeneity-in-trials-that-aim-to-assess-the-effectiveness-of-surgical-treatments-for-stress-urinary-incontinence-in-women
#12
REVIEW
Fung Yee Cheung, Fawzy Farag, Steven MacLennan, Yuhong Yuan, Arjun Nambiar, Muhammad Imran Omar
CONTEXT: Inconsistent reporting of effectiveness outcomes in surgical trials of stress urinary incontinence (SUI) has hindered direct comparisons of various surgical treatments for SUI. OBJECTIVE: To systematically review the verbatim outcome names, outcome definitions, and tools used to measure the outcomes in surgical trials of SUI in women. EVIDENCE ACQUISITION: Trials of women with SUI who have undergone surgical interventions were included...
April 21, 2020: European Urology Focus
https://read.qxmd.com/read/31459932/highly-luminous-n-3-substituted-li-2-msio-4-%C3%AE-n-2-3%C3%AE-eu-2-m-ca-sr-and-ba-for-white-nuv-light-emitting-diodes
#13
JOURNAL ARTICLE
Donghyeon Kim, Choon Woo Ji, Jungjun Lee, Jong-Seong Bae, Tae Eun Hong, Sung Il Ahn, In Chung, Seung-Joo Kim, Jung-Chul Park
The N3- -substituted Li2 MSiO4 :Eu2+ (M = Ca, Sr, and Ba) phosphors were systematically prepared and analyzed. Secondary-ion mass spectroscopy measurements revealed that the average N3- contents are 0.003 for Ca, 0.009 for Sr, and 0.032 for Ba. Furthermore, the N3- incorporation in the host lattices was corroborated by infrared and X-ray photoelectron spectroscopies. From the photoluminescence spectra of Li2 MSiO4 :Eu2+ (M = Ca, Sr, and Ba) phosphors before and after N3- doping, it was verified that the enhanced emission intensity of the phosphors is most likely due to the N3- doping...
May 31, 2019: ACS Omega
https://read.qxmd.com/read/31337710/s-palmitoylation-of-junctophilin-2-is-critical-for-its-role-in-tethering-the-sarcoplasmic-reticulum-to-the-plasma-membrane
#14
JOURNAL ARTICLE
Min Jiang, Junping Hu, Frances White, Judy Williamson, Andrey S Klymchenko, Akshay Murthy, Samuel W Workman, Gea-Ny Tseng
Junctophilins (JPH1 - JPH4) are expressed in excitable and non-excitable cells, where they tether endoplasmic/sarcoplasmic reticulum (ER/SR) and plasma membrane (PM). These ER/SR-PM junctions bring Ca-release channels in ER/SR and Ca as well as Ca-activated K channels in PM to within 10-25 nm. Such proximity is critical for excitation-contraction coupling in muscles, Ca-modulation of excitability in neurons, and Ca homeostasis in non-excitable cells. JPHs are anchored in ER/SR through C-terminal transmembrane-domain (TMD)...
July 23, 2019: Journal of Biological Chemistry
https://read.qxmd.com/read/30962090/inflammatory-biomarkers-geriatric-assessment-and-treatment-outcomes-in-acute-myeloid-leukemia
#15
JOURNAL ARTICLE
Kah Poh Loh, Janet A Tooze, Barbara J Nicklas, Stephen B Kritchevsky, Jeff D Williamson, Leslie R Ellis, Bayard L Powell, Timothy S Pardee, Neha G Goyal, Heidi D Klepin
OBJECTIVES: To investigate changes in inflammatory biomarkers during induction therapy for older adults with acute myeloid leukemia (AML) and their associations with geriatric assessment (GA) measures and outcomes. METHODS: This was a single institution ancillary study to a prospective observational study (N = 20 consecutive adults aged ≥60 with newly diagnosed AML who received induction chemotherapy). Biomarkers (Interleukin-6 [IL-6], IL-6 soluble receptor [IL-6 sR], tumor necrosis factor alpha [TNFα], TNFα soluble receptor 1 [TNFα sR1], interleukin-3 [IL-3], C-reactive protein [CRP]) were collected at start of induction, weekly for three weeks, and post-induction and were compared over time using paired t-tests...
April 2020: Journal of Geriatric Oncology
https://read.qxmd.com/read/30844900/a-simple-method-to-screen-for-radiostrontium-in-water-by-ion-exchange-chromatography
#16
JOURNAL ARTICLE
Dao M Nguyen, W Allen Moody, John A Williamson
Radiostrontium isotopes (Sr, Sr, and Sr) are major fission by-products in nuclear reactors, in radiological events, and in environmental radioactive contamination. A method to analyze Sr and Sr in water has been developed using gradient elution with dilute hydrochloric acid and cation exchange resin, followed by carbonate precipitation. Counting was done on a gas proportional counter. The sample was recounted a second time after 2 to 3 wk to permit Y, a progeny of Sr, to achieve secular equilibrium and to allow Sr and Sr to be determined...
June 2019: Health Physics
https://read.qxmd.com/read/30546191/the-use-of-columns-of-the-zeolite-clinoptilolite-in-the-remediation-of-aqueous-nuclear-waste-streams
#17
JOURNAL ARTICLE
Alan Dyer, Joe Hriljac, Nick Evans, Ian Stokes, Peter Rand, Simon Kellet, Risto Harjula, Teresia Moller, Zoe Maher, Ross Heatlie-Branson, Jonathan Austin, Scott Williamson-Owens, Manon Higgins-Bos, Kurt Smith, Luke O'Brien, Nick Smith, Nick Bryan
Mud Hills clinoptilolite has been used in an effluent treatment plant (SIXEP) at the Sellafield nuclear reprocessing site. This material has been used to remove 134/137 Cs and 90 Sr successfully from effluents for 3 decades. Samples of the zeolite have been tested in column experiments to determine their ability to remove radioactive Cs+ and Sr2+ ions under increasing concentrations of competing ions, Ca2+ , Mg2+ , Na+ and K+ . These ions caused increased elution of Cs+ and Sr2+ . Ca2+ , Mg2+ and K+ were more effective competitors than Na+ ...
2018: Journal of Radioanalytical and Nuclear Chemistry
https://read.qxmd.com/read/29284596/measurable-residual-disease-detection-by-high-throughput-sequencing-improves-risk-stratification-for-pediatric-b-all
#18
JOURNAL ARTICLE
Brent Wood, David Wu, Beryl Crossley, Yunfeng Dai, David Williamson, Charles Gawad, Michael J Borowitz, Meenakshi Devidas, Kelly W Maloney, Eric Larsen, Naomi Winick, Elizabeth Raetz, William L Carroll, Stephen P Hunger, Mignon L Loh, Harlan Robins, Ilan Kirsch
Early response to induction chemotherapy is an important prognostic factor in B-lymphoblastic leukemia (B-ALL). Here, we compare high-throughput sequencing (HTS) of IGH and TRG genes vs flow cytometry (FC) for measurable residual disease (MRD) detection at the end of induction chemotherapy in pediatric patients with newly diagnosed B-ALL. Six hundred nineteen paired pretreatment and end-of-induction bone marrow samples from Children's Oncology Group studies AALL0331 (clinicaltrials.gov #NCT00103285) (standard risk [SR]; with MRD by FC at any level) and AALL0232 (clinicaltrials...
March 22, 2018: Blood
https://read.qxmd.com/read/28844551/safety-and-efficacy-of-high-dose-enteral-intravenous-and-transdermal-clonidine-for-the-acute-management-of-severe-intractable-childhood-dystonia-and-status-dystonicus-an-illustrative-case-series
#19
JOURNAL ARTICLE
V Nakou, K Williamson, T Arichi, D E Lumsden, Steve Tomlin, M Kaminska, J-P Lin
OBJECTIVE: Acute dystonia in children is distressing, painful and can progress to life-threatening status dystonicus. Typical management involves benzodiazepines which can result in respiratory depression requiring PICU admission. Clonidine is less respiratory-depressant, and by facilitating sleep, switches dystonia off. It can also be administered via enteral, continuous intravenous infusion, and transdermal slow release routes. We describe the dose range and safety profile of clonidine management in a case-series of children with severe acute exacerbation of dystonia in a tertiary hospital setting...
November 2017: European Journal of Paediatric Neurology: EJPN
https://read.qxmd.com/read/28416107/characteristics-of-the-peritumoral-pseudocapsule-vary-predictably-with-histologic-subtype-of-t1-renal-neoplasms-jacob-jm-williamson-sr-gondim-dd-leese-ja-terry-c-grignon-dj-boris-rs-urology-november-2015-86-5-956-961
#20
COMMENT
Oleksandr N Kryvenko
OBJECTIVE: To determine characteristics of the peritumoral pseudocapsule (PC) between renal tumor subtypes. METHODS: The peritumoral PCs of 160 pT1 renal tumors were examined, including 60 clear cell renal cell carcinomas (RCCs), 50 papillary RCCs, 25 chromophobe RCCs, and 25 oncocytoma. Pathologic features (presence or absence of PC, mean thickness, continuity, and invasion by tumor) were analyzed. PC thickness was measured using an ocular micrometer to the nearest 1/10mm...
June 2017: Urologic Oncology
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