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https://www.readbyqxmd.com/read/27928637/molecular-functions-of-xanthomonas-type-iii-effector-avrbst-and-its-plant-interactors-in-cell-death-and-defense-signaling
#1
REVIEW
Sang Wook Han, Byung Kook Hwang
Xanthomonas effector AvrBsT interacts with plant defense proteins and triggers cell death and defense response. This review highlights our current understanding of the molecular functions of AvrBsT and its host interactor proteins. The AvrBsT protein is a member of a growing family of effector proteins in both plant and animal pathogens. Xanthomonas type III effector AvrBsT, a member of the YopJ/AvrRxv family, suppresses plant defense responses in susceptible hosts, but triggers cell death signaling leading to hypersensitive response (HR) and defense responses in resistant plants...
December 7, 2016: Planta
https://www.readbyqxmd.com/read/27919690/comparative-analysis-of-different-xanthan-samples-by-atomic-force-microscopy
#2
Julia Teckentrup, Orooba Al-Hammood, Tim Steffens, Hanna Bednarz, Volker Walhorn, Karsten Niehaus, Dario Anselmetti
The polysaccharide xanthan which is produced by the γ-proteobacterium Xanthomonas campestris is used as a food thickening agent and rheologic modifier in numerous food, cosmetics and technical applications. Its great commercial importance stimulated biotechnological approaches to optimize the xanthan production. By targeted genetic modification the metabolism of Xanthomonas can be modified in such a way that the xanthan production efficiency and/or the shear-thickening potency is optimized. Using atomic force microscopy (AFM) the secondary structure of single xanthan polymers produced by the wild type Xanthomonas campestris B100 and several genetically modified variations were analyzed...
December 2, 2016: Journal of Biotechnology
https://www.readbyqxmd.com/read/27918246/rice-leaf-transcriptional-profiling-suggests-a-functional-interplay-between-xanthomonas-oryzae-pv-oryzae-lipopolysaccharide-and-extracellular-polysaccharide-in-modulation-of-defense-responses-during-infection
#3
Anil Madhusoodana Girija, Bipin Kumar Kumar, Madhavi B Mylavarapu, Palaparthi Ramesh, Sridivya Vungarala, Hitendra Kumar Patel, Ramesh Sonti
Treatment of rice leaves with isolated Xanthomonas oryzae pv. oryzae lipopolysaccharide (LPS) induces the production of callose deposits, reactive oxygen species and enhanced resistance against subsequent bacterial infection. Expression profiling of X. oryzae pv. oryzae LPS treated rice (Oryza sativa ssp. indica) leaves showed that genes involved in the biosynthetic pathways for lignins, phenylpropanoids, chorismate, phenylalanine, salicylic acid and ethylene as well as a number of pathogenesis related proteins are up regulated...
December 5, 2016: Molecular Plant-microbe Interactions: MPMI
https://www.readbyqxmd.com/read/27908994/complete-genome-sequence-of-the-barley-pathogen-xanthomonas-translucens-pv-translucens-dsm-18974t-atcc-19319t
#4
Sebastian Jaenicke, Boyke Bunk, Daniel Wibberg, Cathrin Spröer, Lena Hersemann, Jochen Blom, Anika Winkler, Sarah Schatschneider, Stefan P Albaum, Roland Kölliker, Alexander Goesmann, Alfred Pühler, Jörg Overmann, Frank-Jörg Vorhölter
We report here the complete 4.7-Mb genome sequence of Xanthomonas translucens pv. translucens DSM 18974(T), which causes black chaff disease on barley (Hordeum vulgare). Genome data of this X. translucens type strain will improve our understanding of this bacterial species.
December 1, 2016: Genome Announcements
https://www.readbyqxmd.com/read/27907079/identification-of-pectin-degrading-enzymes-secreted-by-xanthomonas-oryzae-pv-oryzae-and-determination-of-their-role-in-virulence-on-rice
#5
Lavanya Tayi, Roshan V Maku, Hitendra Kumar Patel, Ramesh V Sonti
Xanthomonas oryzae pv.oryzae (Xoo) causes the serious bacterial blight disease of rice. Xoo secretes a repertoire of plant cell wall degrading enzymes (CWDEs) like cellulases, xylanases, esterases etc., which act on various components of the rice cell wall. The major cellulases and xylanases secreted by Xoo have been identified and their role in virulence has been determined. In this study, we have identified some of the pectin degrading enzymes of Xoo and assessed their role in virulence. Bioinformatics analysis indicated the presence of four pectin homogalacturonan (HG) degrading genes in the genome of Xoo...
2016: PloS One
https://www.readbyqxmd.com/read/27905546/transcriptome-analysis-confers-a-complex-disease-resistance-network-in-wild-rice-oryza-meyeriana-against-xanthomonas-oryzae-pv-oryzae
#6
Xiao-Jie Cheng, Bin He, Lin Chen, Su-Qin Xiao, Jian Fu, Yue Chen, Teng-Qiong Yu, Zai-Quan Cheng, Hong Feng
Rice bacterial blight (BB), caused by Xanthomonas oryzae pv. oryzae (Xoo), is one of the devastating diseases of rice. It is well established that the wild rice Oryza meyeriana is immune to BB. In this study, the transcriptomic analysis was carried out by RNA sequencing of O. meyeriana leaves, inoculated with Xoo to understand the transcriptional responses and interaction between the host and pathogen. Totally, 57,313 unitranscripts were de novo assembled from 58.7 Gb clean reads and 14,143 unitranscripts were identified after Xoo inoculation...
December 1, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27904465/simultaneous-detection-of-three-bacterial-seed-borne-diseases-in-rice-using-multiplex-polymerase-chain-reaction
#7
In Jeong Kang, Mi-Hyung Kang, Tae-Hwan Noh, Hyeong Kwon Shim, Dong Bum Shin, Suggi Heu
Burkholderia glumae (bacterial grain rot), Xanthomonas oryzae pv. oryzae (bacterial leaf blight), and Acidovorax avenae subsp. avenae (bacterial brown stripe) are major seedborne pathogens of rice. Based on the 16S and 23S rDNA sequences for A. avenae subsp. avenae and B. glumae, and transposase A gene sequence for X. oryzae pv. oryzae, three sets of primers had been designed to produce 402 bp for B. glumae, 490 bp for X. oryzae, and 290 bp for A. avenae subsp. avenae with the 63°C as an optimum annealing temperature...
December 2016: Plant Pathology Journal
https://www.readbyqxmd.com/read/27904456/methylome-analysis-of-two-xanthomonas-spp-using-single-molecule-real-time-sequencing
#8
Hoon Je Seong, Hye-Jee Park, Eunji Hong, Sung Chul Lee, Woo Jun Sul, Sang-Wook Han
Single-molecule real-time (SMRT) sequencing allows identification of methylated DNA bases and methylation patterns/motifs at the genome level. Using SMRT sequencing, diverse bacterial methylomes including those of Helicobacter pylori, Lactobacillus spp., and Escherichia coli have been determined, and previously unreported DNA methylation motifs have been identified. However, the methylomes of Xanthomonas species, which belong to the most important plant pathogenic bacterial genus, have not been documented. Here, we report the methylomes of Xanthomonas axonopodis pv...
December 2016: Plant Pathology Journal
https://www.readbyqxmd.com/read/27902780/co-regulation-of-iron-metabolism-and-virulence-associated-functions-by-iron-and-xibr-a-novel-iron-binding-transcription-factor-in-the-plant-pathogen-xanthomonas
#9
Sheo Shankar Pandey, Pradeep Kumar Patnana, Santosh Kumar Lomada, Archana Tomar, Subhadeep Chatterjee
Abilities of bacterial pathogens to adapt to the iron limitation present in hosts is critical to their virulence. Bacterial pathogens have evolved diverse strategies to coordinately regulate iron metabolism and virulence associated functions to maintain iron homeostasis in response to changing iron availability in the environment. In many bacteria the ferric uptake regulator (Fur) functions as transcription factor that utilize ferrous form of iron as cofactor to regulate transcription of iron metabolism and many cellular functions...
November 2016: PLoS Pathogens
https://www.readbyqxmd.com/read/27897241/functional-involvement-of-a-mitogen-activated-protein-kinase-module-osmkk3-osmpk7-oswrk30-in-mediating-resistance-against-xanthomonas-oryzae-in-rice
#10
Siddhi Kashinath Jalmi, Alok Krishna Sinha
Mitogen-activated protein kinases (MAPKs) are highly conserved signaling modules in eukaryotes, transmitting signals from upstream receptor to downstream target by phosphorelay mechanism. Here we report involvement of a poorly characterized group C MAPK of rice namely, OsMPK7 along with its upstream MAPK kinase, OsMKK3 and downstream target, OsWRKY30 during Xanthomonas oryzae infection, a causal agent of leaf blight disease in rice. X. oryzae infection resulted in induction of OsMPK7 and OsMKK3. OsMKK3 was found to physically interact and phosphorylate OsMPK7...
November 29, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27895129/the-predicted-lytic-transglycosylase-hpah-from-xanthomonas-campestris-pv-vesicatoria-associates-with-the-type-iii-secretion-system-and-promotes-effector-protein-translocation
#11
Jens Hausner, Nadine Hartmann, Michael Jordan, Daniela Büttner
Pathogenicity of the Gram-negative plant-pathogenic bacterium Xanthomonas campestris pv. vesicatoria depends on a type III secretion (T3S) system, which spans both bacterial membranes and translocates effector proteins into plant cells. The assembly of the T3S system presumably involves the predicted lytic transglycosylase (LT) HpaH, which is encoded adjacent to the T3S gene cluster. Bacterial LTs degrade peptidoglycan and often promote the formation of membrane-spanning macromolecular protein complexes. In the present study, we show that HpaH localizes to the bacterial periplasm and binds to peptidoglycan as well as to components of the T3S system including the predicted periplasmic inner rod proteins HrpB1 and HrpB2 as well as the pilus protein HrpE...
November 28, 2016: Infection and Immunity
https://www.readbyqxmd.com/read/27875964/bioengineering-for-microbial-inulinases-trends-and-applications
#12
Puneet Kumar Singh, Vishal Kumar, Ruby Yadav, Pratyoosh Shukla
Inulinase has attracted attention due to their number of applications in various industries viz. pharmaceuticals, food and bioethanol. Enzymes due to their unique properties and enormous power of catalysis at very wide range of temperature are always in demand in industries. There are certain techniques which are employed to improve the productivity of enzymes as well as enhancing their catalytic activity. Modeling of structure of inulinase will provide an overview of the catalytic domain and help in improvising catalytic potential...
November 22, 2016: Current Protein & Peptide Science
https://www.readbyqxmd.com/read/27866607/synthesis-of-silver-nanoparticles-by-endosymbiont-pseudomonas-fluorescens-ca-417-and-their-bactericidal-activity
#13
Baker Syed, Nagendra Prasad M N, Dhananjaya B L, Mohan Kumar K, Yallappa S, Satish S
The present study emphasizes on biogenic synthesis of silver nanoparticles and their bactericidal activity against human and phytopathogens. Nanoparticle synthesis was performed using endosymbiont Pseudomonas fluorescens CA 417 inhabiting Coffea arabica L. Synthesized nanoparticles were characterized using hyphenated spectroscopic techniques such as UV-vis spectroscopy which revealed maximum absorption 425nm. Fourier transform infrared spectroscopy (FTIR) analysis revealed the possible functional groups mediating and stabilizing silver nanoparticles with predominant peaks occurring at 3346 corresponding to hydroxyl group, 1635 corresponding carbonyl group and 680 to aromatic group...
December 2016: Enzyme and Microbial Technology
https://www.readbyqxmd.com/read/27862895/dibenzo-%C3%AE-pyrones-a-new-class-of-larvicidal-metabolites-against-aedes-aegypti-from-the-endophytic-fungus-hyalodendriella-sp-ponipodef12
#14
Ziling Mao, Daowan Lai, Xunda Liu, Xiaoxiang Fu, Jiajia Meng, Ali Wang, Xiaohan Wang, Weibo Sun, Zhi Long Liu, Ligang Zhou, Yang Liu
BACKGROUND: In our course to find new agrochemicals from endophytic fungi, the crude extract of the endophytic Hyalodendriella sp. Ponipodef12 associated with the hybrid 'Neva' of Populus deltoides Marsh × P. nigra L. was found to possess larvicidal activity against Aedes aegypti. RESULTS: Fractionation of the extract has led to the isolation of eleven dibenzo-α-pyrones (1-11) including three new congeners, hyalodendriols A-C (1-3). The structures of the new compounds were elucidated by comprehensive spectroscopic analyses, including the modified Mosher's method for the assignment of the absolute configuration...
November 11, 2016: Pest Management Science
https://www.readbyqxmd.com/read/27861738/online-measurement-of-viscosity-for-biological-systems-in-stirred-tank-bioreactors
#15
Maximilian Schelden, William Lima, Eric Will Doerr, Martin Wunderlich, Lars Rehmann, Jochen Büchs, Lars Regestein
One of the most critical parameters in chemical and biochemical processes is the viscosity of the medium. Its impact on mixing, as well as on mass and energy transfer is substantial. An increase of viscosity with reaction time can be caused by the formation of biopolymers like xanthan or by filamentous growth of microorganisms. In either case the properties of fermentation broth are changing and frequently non-Newtonian behavior are observed, resulting in major challenges for the measurement and control of mixing and mass transfer...
November 14, 2016: Biotechnology and Bioengineering
https://www.readbyqxmd.com/read/27861494/dna-barcoding-for-efficient-species-and-pathovar-level-identification-of-the-quarantine-plant-pathogen-xanthomonas
#16
Qian Tian, Wenjun Zhao, Songyu Lu, Shuifang Zhu, Shidong Li
Genus Xanthomonas comprises many economically important plant pathogens that affect a wide range of hosts. Indeed, fourteen Xanthomonas species/pathovars have been regarded as official quarantine bacteria for imports in China. To date, however, a rapid and accurate method capable of identifying all of the quarantine species/pathovars has yet to be developed. In this study, we therefore evaluated the capacity of DNA barcoding as a digital identification method for discriminating quarantine species/pathovars of Xanthomonas...
2016: PloS One
https://www.readbyqxmd.com/read/27837487/a-tal-based-reporter-assay-for-monitoring-type-iii-dependent-protein-translocation-in-xanthomonas
#17
Sabine Drehkopf, Jens Hausner, Michael Jordan, Felix Scheibner, Ulla Bonas, Daniela Büttner
Gram-negative plant- and animal-pathogenic bacteria use type III secretion (T3S) systems to translocate effector proteins into eukaryotic host cells. Type III-dependent delivery of effector proteins depends on a secretion and translocation signal, which is often located in the N-terminal protein region and is not conserved on the amino acid level. Translocation signals in effector proteins have been experimentally confirmed by employing reporter proteins, which are specifically activated inside eukaryotic cells...
2017: Methods in Molecular Biology
https://www.readbyqxmd.com/read/27834715/finished-genome-sequences-of-xanthomonas-fragariae-the-cause-of-bacterial-angular-leaf-spot-of-strawberry
#18
Peter M Henry, Johan H J Leveau
Xanthomonas fragariae is a foliar pathogen of strawberry that is of significant concern to nursery production of strawberry transplants and field production of strawberry fruit. Long-read sequencing was employed to generate finished genomes for two isolates (each with one chromosome and two plasmids) from symptomatic plants in northern California.
November 10, 2016: Genome Announcements
https://www.readbyqxmd.com/read/27825479/xopn-t3ss-effector-of-xanthomonas-axonopodis-pv-punicae-localizes-to-the-plasma-membrane-and-modulates-ros-accumulation-events-during-blight-pathogenesis-in-pomegranate
#19
Rishikesh Kumar, Madhvi Soni, Kalyan K Mondal
Bacterial blight caused by Xanthomonas axonopodis pv. punicae (Xap) is a major disease of pomegranate. Xap secretes effector proteins via type III secretion system (T3SS) to suppress pathogen-associated molecular pattern (PAMP)-triggered plant immunity (PTI). Previously we reported that XopN, a conserved effector of Xap, modulate in planta bacterial growth, and blight disease. In continuation to that here we report the deletion of XopN from Xap caused higher accumulation of reactive oxygen species (ROS) including H2O2 and O2(-)...
December 2016: Microbiological Research
https://www.readbyqxmd.com/read/27825304/oxyr-regulated-catalase-catb-promotes-the-virulence-in-rice-via-detoxifying-hydrogen-peroxide-in-xanthomonas-oryzae-pv-oryzae
#20
Chao Yu, Nu Wang, Maosen Wu, Fang Tian, Huamin Chen, Fenghuan Yang, Xiaochen Yuan, Ching-Hong Yang, Chenyang He
BACKGROUND: To facilitate infection, Xanthomonas oryzae pv. oryzae (Xoo), the bacterial blight pathogen of rice, needs to degrade hydrogen peroxide (H2O2) generated by the host defense response via a mechanism that is mediated by the transcriptional regulator OxyR. The catalase (CAT) gene catB has previously been shown to belong to the OxyR regulon in Xoo. However, its expression patterns and function in H2O2 detoxification and bacterial pathogenicity on rice remain to be elucidated. RESULTS: The catB gene encodes a putative catalase and is highly conserved in the sequenced strains of Xanthomonas spp...
November 8, 2016: BMC Microbiology
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