keyword
https://read.qxmd.com/read/38417630/global-interactome-mapping-reveals-pro-tumorigenic-interactions-of-nf-%C3%AE%C2%BAb-in-breast-cancer
#21
JOURNAL ARTICLE
Petr Lapcik, R Greg Stacey, David Potesil, Petr Kulhanek, Leonard J Foster, Pavel Bouchal
NF-κB pathway is involved in inflammation, however, recent data shows its role also in cancer development and progression, including metastasis. To understand the role of NF-κB interactome dynamics in cancer, we study the complexity of breast cancer interactome in luminal A breast cancer model and its rearrangement associated with NF-κB modulation. Liquid chromatography-mass spectrometry measurement of 160 size exclusion chromatography (SEC) fractions identifies 5460 protein groups. 7568 interactions among these proteins have been reconstructed by PrInCE algorithm, of which 2564 have been validated in independent datasets...
February 26, 2024: Molecular & Cellular Proteomics: MCP
https://read.qxmd.com/read/38383756/inhibition-of-epigenetic-and-cell-cycle-related-targets-in-glioblastoma-cell-lines-reveals-that-onametostat-reduces-proliferation-and-viability-in-both-normoxic-and-hypoxic-conditions
#22
JOURNAL ARTICLE
Darja Lavogina, Mattias Kaspar Krõlov, Hans Vellama, Vijayachitra Modhukur, Valentina Di Nisio, Helen Lust, Kattri-Liis Eskla, Andres Salumets, Jana Jaal
The choice of targeted therapies for treatment of glioblastoma patients is currently limited, and most glioblastoma patients die from the disease recurrence. Thus, systematic studies in simplified model systems are required to pinpoint the choice of targets for further exploration in clinical settings. Here, we report screening of 5 compounds targeting epigenetic writers or erasers and 6 compounds targeting cell cycle-regulating protein kinases against 3 glioblastoma cell lines following incubation under normoxic or hypoxic conditions...
February 21, 2024: Scientific Reports
https://read.qxmd.com/read/38372724/genetic-screen-identified-prmt5-as-a-neuroprotection-target-against-cerebral-ischemia
#23
JOURNAL ARTICLE
Haoyang Wu, Peiyuan Lv, Jinyu Wang, Brian Bennett, Jiajia Wang, Pishun Li, Yi Peng, Guang Hu, Jiaji Lin
Epigenetic regulators present novel opportunities for both ischemic stroke research and therapeutic interventions. While previous work has implicated that they may provide neuroprotection by potentially influencing coordinated sets of genes and pathways, most of them remain largely uncharacterized in ischemic conditions. In this study, we used the oxygen-glucose deprivation (OGD) model in the immortalized mouse hippocampal neuronal cell line HT-22 and carried out an RNAi screen on epigenetic regulators. PRMT5 was identified as a novel negative regulator of neuronal cell survival after OGD, which presented a phenotype of translocation from the cytosol to the nucleus upon oxygen and energy depletion both in vitro and in vivo...
February 19, 2024: ELife
https://read.qxmd.com/read/38370617/broad-de-regulated-u2af1-splicing-is-prognostic-and-augments-leukemic-transformation-via-protein-arginine-methyltransferase-activation
#24
Meenakshi Venkatasubramanian, Leya Schwartz, Nandini Ramachandra, Joshua Bennett, Krithika R Subramanian, Xiaoting Chen, Shanisha Gordon-Mitchell, Ariel Fromowitz, Kith Pradhan, David Shechter, Srabani Sahu, Diane Heiser, Peggy Scherle, Kashish Chetal, Aishwarya Kulkarni, Kasiani C Myers, Matthew T Weirauch, H Leighton Grimes, Daniel T Starczynowski, Amit Verma, Nathan Salomonis
UNLABELLED: The role of splicing dysregulation in cancer is underscored by splicing factor mutations; however, its impact in the absence of such rare mutations is poorly understood. To reveal complex patient subtypes and putative regulators of pathogenic splicing in Acute Myeloid Leukemia (AML), we developed a new approach called OncoSplice. Among diverse new subtypes, OncoSplice identified a biphasic poor prognosis signature that partially phenocopies U2AF1 -mutant splicing, impacting thousands of genes in over 40% of adult and pediatric AML cases...
February 8, 2024: bioRxiv
https://read.qxmd.com/read/38346967/exploiting-epigenetic-targets-to-overcome-taxane-resistance-in-prostate-cancer
#25
JOURNAL ARTICLE
Buse Cevatemre, Ipek Bulut, Beyza Dedeoglu, Arda Isiklar, Hamzah Syed, Ozlem Yedier Bayram, Tugba Bagci-Onder, Ceyda Acilan
The development of taxane resistance remains a major challenge for castration resistant prostate cancer (CR-PCa), despite the effectiveness of taxanes in prolonging patient survival. To uncover novel targets, we performed an epigenetic drug screen on taxane (docetaxel and cabazitaxel) resistant CR-PCa cells. We identified BRPF reader proteins, along with several epigenetic groups (CBP/p300, Menin-MLL, PRMT5 and SIRT1) that act as targets effectively reversing the resistance mediated by ABCB1. Targeting BRPFs specifically resulted in the resensitization of resistant cells, while no such effect was observed on the sensitive compartment...
February 12, 2024: Cell Death & Disease
https://read.qxmd.com/read/38341164/epigenetic-regulators-controlling-osteogenic-lineage-commitment-and-bone-formation
#26
REVIEW
Parisa Dashti, Eric A Lewallen, Jonathan A R Gordon, Martin A Montecino, James R Davie, Gary S Stein, Johannes P T M van Leeuwen, Bram C J van der Eerden, Andre J van Wijnen
Bone formation and homeostasis are controlled by environmental factors and endocrine regulatory cues that initiate intracellular signaling pathways capable of modulating gene expression in the nucleus. Bone-related gene expression is controlled by nucleosome-based chromatin architecture that limits the accessibility of lineage-specific gene regulatory DNA sequences and sequence-specific transcription factors. From a developmental perspective, bone-specific gene expression must be suppressed during the early stages of embryogenesis to prevent the premature mineralization of skeletal elements during fetal growth in utero...
February 8, 2024: Bone
https://read.qxmd.com/read/38321923/the-unique-dual-targeting-of-ago1-by-two-types-of-prmt-enzymes-promotes-phasirna-loading-in-arabidopsis-thaliana
#27
JOURNAL ARTICLE
Clément Barre-Villeneuve, Michèle Laudié, Marie-Christine Carpentier, Lauriane Kuhn, Thierry Lagrange, Jacinthe Azevedo-Favory
Arginine/R methylation (R-met) of proteins is a widespread post-translational modification (PTM), deposited by a family of protein arginine/R methyl transferase enzymes (PRMT). Regulations by R-met are involved in key biological processes deeply studied in metazoan. Among those, post-transcriptional gene silencing (PTGS) can be regulated by R-met in animals and in plants. It mainly contributes to safeguard processes as protection of genome integrity in germlines through the regulation of piRNA pathway in metazoan, or response to bacterial infection through the control of AGO2 in plants...
February 7, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38307587/prmt5-pak1-signaling-participates-in-metastasis-and-is-associated-with-poor-prognosis-in-human-esophageal-carcinoma
#28
JOURNAL ARTICLE
Xiaofang Zou, Yiwen Lin, Hongzheng Ren, Yuhua Meng, Shuanglong Chen, Yinhui Jiang, Weiheng Cui, Yinfang Gu, Longhua Guo, Lilan Yi, Dianzheng Zhang, Hao Zhang, Guowu Wu
BACKGROUND/AIM: Protein arginine methyltransferase 5 (PRMT5), a member of the arginine methyltransferases, is an enzyme catalyzing the methylation of arginine residuals of histones and non-histone proteins to serve as one of many critical posttranslational modifications (PTMs). Phosphorylated P21-activated kinase 1 (p-PAK1), a serine/threonine protein kinase family member, is a cytoskeletal protein that plays a critical role in metastasis. We examined the expression of PRMT5 and PAK1 in esophageal squamous cell carcinoma (ESCC) and evaluated the correlation between PRMT5/p-PAK1 and both clinicopathological parameters and prognosis of ESCC patients...
February 2024: Anticancer Research
https://read.qxmd.com/read/38301329/structure-based-discovery-of-a-new-series-of-nucleoside-derived-ring-opening-prmt5-inhibitors
#29
JOURNAL ARTICLE
Yuting Chen, Zekun Wang, Junjie Zhang, Qiongyu Shi, Hong Yang, Yue Deng, Xingcan Wang, Tongchao Liu, Meiyu Geng, Bing Xiong, Xun Huang
The ubiquitous methyltransferases employing SAM as the methyl donor have emerged as potential targets in many disease treatments, especially in anticancer. Therefore, developing SAM-competitive inhibitors of methyltransferases is of great interest to the drug research. To explore this direction, herein, we rationally designed a series of nucleoside derivatives as potent PRMT5 inhibitors with novel scaffold. The representative compounds A2 and A8 exhibited highly potent PRMT5 inhibition activity as well as good selectivity over other PRMTs and PKMTs...
January 28, 2024: European Journal of Medicinal Chemistry
https://read.qxmd.com/read/38297969/protein-arginine-methyltransferase-5-in-osteoblasts-promotes-the-healing-of-extraction-sockets
#30
JOURNAL ARTICLE
Jie Yang, Shurong Yang, Xuejun Ge, Lu Yuan, Yini Qi, Zhen Huang, Guan Yang, Ran Zhang
OBJECTIVES: To explore the effect of protein arginine methyltransferase 5 (PRMT5) on tooth extraction sockets healing, we established an extraction sockets model in osteoblast-conditional Prmt5 knockout mice. The results provided clues for promoting extraction sockets healing in clinical settings. MATERIALS AND METHODS: Maxillary first molars were extracted from 6 to 8-week-old mice to establish an extraction fossa model. Microcomputed tomography (Micro-CT), histology, and immunostaining assays were performed on samples harvested at 3-, 7-, and 14-day post-extraction...
January 31, 2024: Oral Diseases
https://read.qxmd.com/read/38277892/crispr-cas9-mediated-chicken-prmt5-gene-knockout-and-its-critical-role-in-interferon-regulation
#31
JOURNAL ARTICLE
Qinghua Zeng, Jingjing Cao, Fei Xie, Lina Zhu, Xiangdong Wu, Xifeng Hu, Zheng Chen, Xiaoqing Chen, Xiangzhi Li, Cheng-Ming Chiang, Huansheng Wu
Protein arginine methyltransferase 5 (PRMT5), a type II arginine methyltransferase, controls arginine dimethylation of a variety of substrates. While many papers have reported the function of mammalian PRMT5, it remains unclear how PRMT5 functions in chicken cells. In this study, we found that chicken (ch) PRMT5 is widely expressed in a variety of chicken tissues and is distributed in both the cytoplasm and the nucleus. Ectopic expression of chPRMT5 significantly suppresses chIFN-β activation induced by chMDA5...
December 9, 2023: Poultry Science
https://read.qxmd.com/read/38272855/etd-based-proteomic-profiling-improves-arginine-methylation-identification-and-reveals-novel-prmt5-substrates
#32
JOURNAL ARTICLE
Lingzi Lu, Zilu Ye, Rou Zhang, Jesper V Olsen, Yanqiu Yuan, Yang Mao
Protein arginine methylations are important post-translational modifications (PTMs) in eukaryotes, regulating many biological processes. However, traditional collision-based mass spectrometry methods inevitably cause neutral losses of methylarginines, preventing the deep mining of biologically important sites. Herein we developed an optimized mass spectrometry workflow based on electron-transfer dissociation (ETD) with supplemental activation for proteomic profiling of arginine methylation in human cells. Using symmetric dimethylarginine (sDMA) as an example, we show that the ETD-based optimized workflow significantly improved the identification and site localization of sDMA...
January 25, 2024: Journal of Proteome Research
https://read.qxmd.com/read/38260418/prmt5-orchestrates-egfr-and-akt-networks-to-activate-nf%C3%AE%C2%BAb-and-promote-emt
#33
Lei Huang, Manasa Ravi, Xiao-Ou Zhang, Odette Verdejo-Torres, Noha A M Shendy, Mohammad A M Nezhady, Sneha Gopalan, Gang Wang, Adam D Durbin, Thomas G Fazzio, Qiong Wu
Neuroblastoma remains a formidable challenge in pediatric oncology, representing 15% of cancer-related mortalities in children. Despite advancements in combinatorial and targeted treatments improving survival rates, nearly 50% of patients with high-risk neuroblastoma will ultimately succumb to their disease. Dysregulation of the epithelial-mesenchymal transition (EMT) is a key mechanism of tumor cell dissemination, resulting in metastasis and poor outcomes in many cancers. Our prior work identified PRMT5 as a key regulator of EMT via methylation of AKT at arginine 15, enhancing the expression of EMT-driving transcription factors and facilitating metastasis...
January 4, 2024: bioRxiv
https://read.qxmd.com/read/38252663/brg1-prmt5-nuclear-complex-epigenetically-regulates-foxo1-in-ipf-mesenchymal-progenitor-cells
#34
JOURNAL ARTICLE
Aiham H Jbeli, Libang Yang, Hong Xia, Adam J Gilbertsen, Peter B Bitterman, Craig A Henke
We have discovered intrinsically fibrogenic mesenchymal progenitor cells (MPCs) in the human IPF lung. IPF MPCs display a durably distinct transcriptome suggesting that they have undergone epigenetic modifications. Prior studies indicate that the chromatin remodeler Brg1 associates with the arginine methyltransferase PRMT5 to epigenetically regulate transcription factors. We hypothesize that a Brg1/PRMT5 nuclear complex epigenetically regulates critical nodes in IPF MPC self-renewal signaling networks. IPF and control MPCs were isolated from primary mesenchymal cell lines established from IPF and control patients...
January 22, 2024: American Journal of Physiology. Lung Cellular and Molecular Physiology
https://read.qxmd.com/read/38203325/genetic-alterations-of-nf-%C3%AE%C2%BAb-and-its-regulators-a-rich-platform-to-advance-colorectal-cancer-diagnosis-and-treatment
#35
REVIEW
Faranak Alipourgivi, Aishat Motolani, Alice Y Qiu, Wenan Qiang, Guang-Yu Yang, Shuibing Chen, Tao Lu
Colorectal cancer (CRC) is the third leading cause of cancer mortality in the United States, with an estimated 52,000 deaths in 2023. Though significant progress has been made in both diagnosis and treatment of CRC in recent years, genetic heterogeneity of CRC-the culprit for possible CRC relapse and drug resistance, is still an insurmountable challenge. Thus, developing more effective therapeutics to overcome this challenge in new CRC treatment strategies is imperative. Genetic and epigenetic changes are well recognized to be responsible for the stepwise development of CRC malignancy...
December 21, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/38193716/resistance-to-prmt5-targeted-therapy-in-mantle-cell-lymphoma
#36
JOURNAL ARTICLE
Mackenzie Elizabeth Long, Shirsha Koirala, Shelby Sloan, Fiona Brown-Burke, Christoph Weigel, Lynda Villagomez, Kara Corps, Archisha Sharma, Ian Hout, Margaret Harper, JoBeth Helmig-Mason, Sheetal Tallada, Zhengming Chen, Peggy Scherle, Kris Vaddi, Selina Chen-Kiang, Maurizio Di Liberto, Cem Meydan, Jonathan Foox, Daniel Butler, Christopher Mason, Lapo Alinari, Bradley W Blaser, Robert Baiocchi
Mantle cell lymphoma (MCL) is an incurable B-cell non-Hodgkin lymphoma, and patients who relapse on targeted therapies have poor prognosis. Protein arginine methyltransferase 5 (PRMT5), an enzyme essential for B-cell transformation, drives multiple oncogenic pathways and is overexpressed in MCL. Despite the antitumor activity of PRMT5 inhibition (PRT-382/PRT-808), drug resistance was observed in a patient-derived xenograft (PDX) MCL model. Decreased survival of mice engrafted with these PRMT5 inhibitor-resistant cells vs treatment-naive cells was observed (P = ...
January 9, 2024: Blood Advances
https://read.qxmd.com/read/38172189/prmt5-inhibition-shows-in-vitro-efficacy-against-h3k27m-altered-diffuse-midline-glioma-but-does-not-extend-survival-in-vivo
#37
JOURNAL ARTICLE
Elizabeth J Brown, Leire Balaguer-Lluna, Adam P Cribbs, Martin Philpott, Leticia Campo, Molly Browne, Jong Fu Wong, Udo Oppermann, Ángel M Carcaboso, Alex N Bullock, Gillian Farnie
H3K27-altered Diffuse Midline Glioma (DMG) is a universally fatal paediatric brainstem tumour. The prevalent driver mutation H3K27M creates a unique epigenetic landscape that may also establish therapeutic vulnerabilities to epigenetic inhibitors. However, while HDAC, EZH2 and BET inhibitors have proven somewhat effective in pre-clinical models, none have translated into clinical benefit due to either poor blood-brain barrier penetration, lack of efficacy or toxicity. Thus, there remains an urgent need for new DMG treatments...
January 3, 2024: Scientific Reports
https://read.qxmd.com/read/38169121/l-ascorbyl-2-phosphate-alleviates-white-matter-injury-caused-by-chronic-hypoxia-through-the-prmt5-p53-nf-%C3%AE%C2%BAb-pathway
#38
JOURNAL ARTICLE
Bingqing Ding, Jia Lou, Tianqi Qin, Weiwei Xie, Di Li, Peijun Li, Xingyun Wang, Zhenlang Lin, Xiaoling Guo, Jianghu Zhu
White matter injury (WMI) is one of the most serious complications associated with preterm births. Damage to oligodendrocytes, which are the key cells involved in WMI pathogenesis, can directly lead to myelin abnormalities. L-ascorbyl-2-phosphate (AS-2P) is a stable form of vitamin C. This study aimed to explore the protective effects of AS-2P against chronic hypoxia-induced WMI, and elucidate the underlying mechanisms. An in vivo chronic hypoxia model and in vitro oxygen-glucose deprivation (OGD) model were established to explore the effects of AS-2P on WMI using immunofluorescence, immunohistochemistry, western blotting, real-time quantitative polymerase chain reaction, Morris water maze test, novel object recognition test, beaming-walking test, electron microscopy, and flow cytometry...
January 3, 2024: Journal of Neurochemistry
https://read.qxmd.com/read/38168093/multi-omic-and-functional-analysis-for-classification-and-treatment-of-sarcomas-with-fus-tfcp2-or-ewsr1-tfcp2-fusions
#39
JOURNAL ARTICLE
Julia Schöpf, Sebastian Uhrig, Christoph E Heilig, Kwang-Seok Lee, Tatjana Walther, Alexander Carazzato, Anna Maria Dobberkau, Dieter Weichenhan, Christoph Plass, Mark Hartmann, Gaurav D Diwan, Zunamys I Carrero, Claudia R Ball, Tobias Hohl, Thomas Kindler, Patricia Rudolph-Hähnel, Dominic Helm, Martin Schneider, Anna Nilsson, Ingrid Øra, Roland Imle, Ana Banito, Robert B Russell, Barbara C Jones, Daniel B Lipka, Hanno Glimm, Daniel Hübschmann, Wolfgang Hartmann, Stefan Fröhling, Claudia Scholl
Linking clinical multi-omics with mechanistic studies may improve the understanding of rare cancers. We leverage two precision oncology programs to investigate rhabdomyosarcoma with FUS/EWSR1-TFCP2 fusions, an orphan malignancy without effective therapies. All tumors exhibit outlier ALK expression, partly accompanied by intragenic deletions and aberrant splicing resulting in ALK variants that are oncogenic and sensitive to ALK inhibitors. Additionally, recurrent CKDN2A/MTAP co-deletions provide a rationale for PRMT5-targeted therapies...
January 2, 2024: Nature Communications
https://read.qxmd.com/read/38156384/prmt5-participates-in-b-cell-overactivation-in-patients-with-primary-sjogren-s-syndrome-pss-through-rsad2-mediated-nf-%C3%AE%C2%BAb-signaling
#40
JOURNAL ARTICLE
Hong Zhu, Jian Zheng, Yan Zhou, Tong Wu, Tiantian Zhu
OBJECTIVE: There are new evidences that protein arginine methyltransferase 5 (PRMT5) is widely involved in the progression of various diseases, but its effect is unclear on Primary Sjogren's syndrome (pSS). The main purpose of this study is to explore the regulatory effect of PRMT5 on pSS and its potential mechanisms. METHODS: CD40L treated CD19 + B cells to construct a cell model of pSS. CCK-8 assay and Annexin V-FITC/PI kits were used to measure cell proliferation and apoptosis...
December 2023: Immunity, Inflammation and Disease
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