keyword
https://read.qxmd.com/read/38648116/-xanthomonas-as-a-model-system-for-studying-pathogen-emergence-and-evolution
#1
JOURNAL ARTICLE
Sujan Timilsina, Amandeep Kaur, Anuj Sharma, Sivakumar Ramamoorthy, Gary E Vallad, Nian Wang, Frank F White, Neha Potnis, Erica M Goss, Jeffrey B Jones
In this review, we highlight studies where whole genome sequencing, comparative genomics and population genomics have provided unprecedented insights into past and ongoing pathogen evolution. These include new understanding of adaptive evolution of secretion systems and their effectors. We focus on Xanthomonas pathosystems that have seen intensive study and improved our understanding of pathogen emergence and evolution, particularly in the context of host specialization: citrus canker, bacterial blight of rice, and bacterial spot of tomato and pepper...
April 22, 2024: Phytopathology
https://read.qxmd.com/read/38648112/biological-characterization-of-physostegia-chlorotic-mottle-virus-an-emergent-virus-infecting-vegetables-in-diversified-production-systems
#2
JOURNAL ARTICLE
Coline Temple, Arnaud G Blouin, Dieke Boezen, Marleen Botermans, Laurena Durant, Kris De Jonghe, Pier de Koning, Thomas Goedefroit, Laurent Minet, Stephan Steyer, Eric Verdin, Mark Zwart, Sebastien Massart
In 2014, Physostegia chlorotic mottle virus (PhCMoV) was discovered in Austria in Physostegia virginiana. Subsequent collaborative efforts established a link between the virus and severe fruit symptoms on important crops like tomato, eggplant, and cucumber across nine European countries. Thereafter, specific knowledge gaps, which are crucial to assess the risks PhCMoV can pose for the production and how to manage it, needed to be addressed. In this study, the transmission, prevalence, and disease severity of PhCMoV were examinated...
April 22, 2024: Phytopathology
https://read.qxmd.com/read/38648108/methods-for-screening-and-evaluation-of-antimicrobial-activity-a-review-of-protocols-advantages-and-limitations
#3
REVIEW
Tanim Jabid Hossain
Infectious diseases pose a formidable global challenge, compounded by the emergence of antimicrobial resistance. Consequently, researchers are actively exploring novel antimicrobial compounds as potential solutions. This endeavor underscores the pivotal role of methods employed for screening and evaluating antimicrobial activity-a critical step in discovery and characterization of antimicrobial agents. While traditional techniques such as well-diffusion, disk-diffusion, and broth-dilution are commonly utilized in antimicrobial assays, they may encounter limitations concerning reproducibility and speed...
April 22, 2024: European Journal of Microbiology & Immunology
https://read.qxmd.com/read/38648107/targeting-the-tgf-%C3%AE-signaling-pathway-an-updated-patent-review-2021-present
#4
REVIEW
Wenhao Guo, Hanwen Liu, Yong Yan, Di Wu, Hequan Yao, Kejiang Lin, Xuanyi Li
INTRODUCTION: The TGF-β signaling pathway is a complex network that plays a crucial role in regulating essential biological functions and is implicated in the onset and progression of multiple diseases. This review highlights the recent advancements in developing inhibitors targeting the TGF-β signaling pathway and their potential therapeutic applications in various diseases. AREA COVERED: The review discusses patents on active molecules related to the TGF-β signaling pathway, focusing on three strategies: TGF-β activity inhibition, blocking TGF-β receptor binding, and disruption of the signaling pathway using small molecule inhibitors...
April 22, 2024: Expert Opinion on Therapeutic Patents
https://read.qxmd.com/read/38648102/collective-spin-wave-dynamics-in-gyroid-ferromagnetic-nanostructures
#5
JOURNAL ARTICLE
Mateusz Gołębiewski, Riccardo Hertel, Massimiliano d'Aquino, Vitaliy Vasyuchka, Mathias Weiler, Philipp Pirro, Maciej Krawczyk, Shunsuke Fukami, Hideo Ohno, Justin Llandro
Expanding upon the burgeoning discipline of magnonics, this research elucidates the intricate dynamics of spin waves (SWs) within three-dimensional nanoenvironments. It marks a shift from traditionally used planar systems to exploration of magnetization configurations and the resulting dynamics within 3D nanostructures. This study deploys micromagnetic simulations alongside ferromagnetic resonance measurements to scrutinize magnetic gyroids, periodic chiral configurations composed of chiral triple junctions with a period in nanoscale...
April 22, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38648095/mapping-theme-evolution-and-identifying-hotspots-in-biomarkers-of-systemic-lupus-erythematosus-based-on-global-research
#6
JOURNAL ARTICLE
Haitao Yu, Yafei Xie, Meiying Zuo, Jianguo Xu, Lili Jiang, Ting Liu, Renmei Wang, Dexuan Hu, Zhenglei Cha
Objective: To perform a bibliometric analysis in the field of biomarkers for systemic lupus erythematosus. Methods: Publications were from Web of Science. Microsoft Excel, VOSviewer, Science Mapping Analysis software Tool, CiteSpace and Tableau were used for analysis. Results: A total of 1112 publications were identified; 1503 institutions from 69 countries contributed, with the highest outputs from China and Karolinska University Hospital. Petri had a tremendous impact. Academic collaborations were localized...
April 22, 2024: Biomarkers in Medicine
https://read.qxmd.com/read/38648092/stimulating-preconception-care-uptake-by-women-with-a-vulnerable-health-status-through-a-mobile-health-app-pregnant-faster-pilot-feasibility-study
#7
JOURNAL ARTICLE
Sharissa M Smith, Babette Bais, Hafez Ismaili M'hamdi, Maartje Hn Schermer, Régine Pm Steegers-Theunissen
BACKGROUND: A low socioeconomic status is associated with a vulnerable health status (VHS) through the accumulation of health-related risk factors, such as poor lifestyle behaviors (eg, inadequate nutrition, chronic stress, and impaired health literacy). For pregnant women, a VHS translates into a high incidence of adverse pregnancy outcomes and therefore pregnancy-related inequity. We hypothesize that stimulating adequate pregnancy preparation, targeting lifestyle behaviors and preconception care (PCC) uptake, can reduce these inequities and improve the pregnancy outcomes of women with a VHS...
April 22, 2024: JMIR Human Factors
https://read.qxmd.com/read/38648090/patient-and-staff-experience-of-remote-patient-monitoring-what-to-measure-and-how-systematic-review
#8
REVIEW
Valeria Pannunzio, Hosana Cristina Morales Ornelas, Pema Gurung, Robert van Kooten, Dirk Snelders, Hendrikus van Os, Michel Wouters, Rob Tollenaar, Douwe Atsma, Maaike Kleinsmann
BACKGROUND: Patient and staff experience is a vital factor to consider in the evaluation of remote patient monitoring (RPM) interventions. However, no comprehensive overview of available RPM patient and staff experience-measuring methods and tools exists. OBJECTIVE: This review aimed at obtaining a comprehensive set of experience constructs and corresponding measuring instruments used in contemporary RPM research and at proposing an initial set of guidelines for improving methodological standardization in this domain...
April 22, 2024: Journal of Medical Internet Research
https://read.qxmd.com/read/38648081/time-restricted-feeding-can-increase-food-related-impulsivity-a-randomized-controlled-trial
#9
JOURNAL ARTICLE
Elif Güner, Şule Aktaç
OBJECTIVES: Although an increasing number of studies show that time-restricted feeding may improve metabolic health, studies examining the behavioral effects of this eating pattern are limited. This study examined the effect of time-restricted feeding on impulsivity in adults. METHODS: Thirty adults aged 25-41 years participated in this randomized controlled trial. The intervention group followed time-restricted feeding for 4 weeks and there was no energy restriction in the intervention group (n = 15) or control group (n = 15)...
April 22, 2024: Nutritional Neuroscience
https://read.qxmd.com/read/38648080/cervical-spine-surgery-following-covid-19-infection-when-is-it-safe-to-proceed
#10
JOURNAL ARTICLE
Justin P Chan, Henry Hoang, Hao-Hua Wu, Don Y Park, Yu-Po Lee, Nitin Bhatia, Sohaib Z Hashmi
STUDY DESIGN: Retrospective. OBJECTIVE: We utilized the NIH National COVID Cohort Collaborative (N3C) database to characterize the risk profile of patients undergoing spine surgery during multiple time windows following the COVID-19 infection. SUMMARY OF BACKGROUND DATA: While the impact of COVID-19 on various organ systems is well documented, there is limited knowledge regarding its effect on perioperative complications following spine surgery or the optimal timing of surgery after an infection...
April 19, 2024: Clinical Spine Surgery
https://read.qxmd.com/read/38648070/insights-into-the-mechanical-characterization-of-mouse-brain-tissue-using-microindentation-testing
#11
JOURNAL ARTICLE
Xuesong Zhang, Eva A N van den Hurk, Johannes Weickenmeier
Indentation testing is the most common approach to quantify mechanical brain tissue properties. Despite a myriad of studies conducted already, reported stiffness values vary extensively and continue to be subject of study. Moreover, the growing interest in the relationship between the brain's spatially heterogeneous microstructure and local tissue stiffness warrants the development of standardized measurement protocols to enable comparability between studies and assess repeatability of reported data. Here, we present three individual protocols that outline (1) sample preparation of a 1000-µm thick coronal slice, (2) a comprehensive list of experimental parameters associated with the FemtoTools FT-MTA03 Micromechanical Testing System for spherical indentation, and (3) two different approaches to derive the elastic modulus from raw force-displacement data...
April 2024: Current protocols
https://read.qxmd.com/read/38648069/a-24-year-old-man-with-spastic-ataxia-and-hypodontia
#12
JOURNAL ARTICLE
Lissa Marien, Panagiota Tsitsi, Gert Cypers
No abstract text is available yet for this article.
April 22, 2024: JAMA Neurology
https://read.qxmd.com/read/38648061/biomarker-vs-mri-enhanced-strategies-for-prostate-cancer-screening-the-sthlm3-mri-randomized-clinical-trial
#13
JOURNAL ARTICLE
Lars Björnebo, Andrea Discacciati, Ugo Falagario, Hari T Vigneswaran, Fredrik Jäderling, Henrik Grönberg, Martin Eklund, Tobias Nordström, Anna Lantz
IMPORTANCE: Prostate cancer guidelines often recommend obtaining magnetic resonance imaging (MRI) before a biopsy, yet MRI access is limited. To date, no randomized clinical trial has compared the use of novel biomarkers for risk estimation vs MRI-based diagnostic approaches for prostate cancer screening. OBJECTIVE: To evaluate biomarker-based risk estimation (Stockholm3 risk scores or prostate-specific antigen [PSA] levels) with systematic biopsies vs an MRI-enhanced strategy (PSA levels and MRI with systematic and targeted biopsy) for the detection of clinically significant prostate cancer in a screening setting...
April 1, 2024: JAMA Network Open
https://read.qxmd.com/read/38648051/trends-in-the-prevalence-of-common-retinal-and-optic-nerve-diseases-in-china-an-artificial-intelligence-based-national-screening
#14
JOURNAL ARTICLE
Ruiheng Zhang, Li Dong, Xuefei Fu, Lin Hua, Wenda Zhou, Heyan Li, Haotian Wu, Chuyao Yu, Yitong Li, Xuhan Shi, Yangjie Ou, Bing Zhang, Bin Wang, Zhiqiang Ma, Yuan Luo, Meng Yang, Xiangang Chang, Zhaohui Wang, Wenbin Wei
PURPOSE: Retinal and optic nerve diseases have become the primary cause of irreversible vision loss and blindness. However, there is still a lack of thorough evaluation regarding their prevalence in China. METHODS: This artificial intelligence-based national screening study applied a previously developed deep learning algorithm, named the Retinal Artificial Intelligence Diagnosis System (RAIDS). De-identified personal medical records from January 2019 to December 2021 were extracted from 65 examination centers in 19 provinces of China...
April 2, 2024: Translational Vision Science & Technology
https://read.qxmd.com/read/38648049/gradhc-highly-reliable-gradual-hash-based-clustering-for-dna-storage-systems
#15
JOURNAL ARTICLE
Dvir Ben Shabat, Adar Hadad, Avital Boruchovsky, Eitan Yaakobi
MOTIVATION: As data storage challenges grow and existing technologies approach their limits, synthetic DNA emerges as a promising storage solution due to its remarkable density and durability advantages. While cost remains a concern, emerging sequencing and synthetic technologies aim to mitigate it, yet introduce challenges such as errors in the storage and retrieval process. One crucial task in a DNA storage system is clustering numerous DNA reads into groups that represent the original input strands...
April 22, 2024: Bioinformatics
https://read.qxmd.com/read/38648046/cold-induced-reflex-epilepsy
#16
JOURNAL ARTICLE
Cathy Meng Fei Li, David Dongkyung Kim, Seyed M Mirsattari
No abstract text is available yet for this article.
April 22, 2024: JAMA Neurology
https://read.qxmd.com/read/38648043/developmental-milestone-attainment-in-us-children-before-and-during-the-covid-19-pandemic
#17
JOURNAL ARTICLE
Sara B Johnson, Molly Kuehn, Jennifer O Lambert, J Paul Spin, Lauren M Klein, Barbara Howard, Raymond Sturner, Eliana M Perrin
IMPORTANCE: Restrictions related to the COVID-19 pandemic disrupted the lives of young children, but the association between the pandemic and any changes in early childhood developmental milestone achievement in the US remains unclear. OBJECTIVES: To determine the association between the COVID-19 pandemic and changes in developmental screening scores among US children aged 0 to 5 years and to investigate whether caregivers self-reported more worries about their children or concerns about children's behavior during the pandemic, regardless of milestone achievement...
April 22, 2024: JAMA Pediatrics
https://read.qxmd.com/read/38648039/levels-of-the-htra1-protein-in-serum-and-vitreous-humor-are-independent-of-genetic-risk-for-age-related-macular-degeneration-at-the-10q26-locus
#18
JOURNAL ARTICLE
Brandi L Williams, Moussa A Zouache, Nathan A Seager, Chris M Pappas, Jin Liu, Robert A Anstadt, William C Hubbard, Julie Thomas, Jill L Hageman, Jennifer Mohler, Burt T Richards, Gregory S Hageman
PURPOSE: The purpose of this study was to determine if levels of the HtrA1 protein in serum or vitreous humor are influenced by genetic risk for age-related macular degeneration (AMD) at the 10q26 locus, age, sex, AMD status, and/or AMD disease severity, and, therefore, to determine the contribution of systemic and ocular HtrA1 to the AMD disease process. METHODS: A custom-made sandwich ELISA assay (SCTM ELISA) for detection of the HtrA1 protein was designed and compared with three commercial assays (R&D Systems, MyBiosource 1 and MyBiosource 2) using 65 serum samples...
April 1, 2024: Investigative Ophthalmology & Visual Science
https://read.qxmd.com/read/38648031/time-dependent-multilevel-density-functional-theory
#19
JOURNAL ARTICLE
Tommaso Giovannini, Marco Scavino, Henrik Koch
We present a novel three-layer approach based on multilevel density functional theory (MLDFT) and polarizable molecular mechanics to simulate the electronic excitations of chemical systems embedded in an external environment within the time-dependent DFT formalism. In our method, the electronic structure of a target system, the chromophore, is determined in the field of an embedded inactive layer, which is treated as frozen. Long-range interactions are described by employing the polarizable fluctuating charge (FQ) force field...
April 22, 2024: Journal of Chemical Theory and Computation
https://read.qxmd.com/read/38648030/effects-of-tirofiban-on-neurological-deterioration-in-patients-with-acute-ischemic-stroke-a-randomized-clinical-trial
#20
JOURNAL ARTICLE
Wenbo Zhao, Sijie Li, Chuanhui Li, Chuanjie Wu, Junmei Wang, Lifei Xing, Yue Wan, Jinhui Qin, Yaoming Xu, Ruixian Wang, Changming Wen, Aihua Wang, Lan Liu, Jing Wang, Haiqing Song, Wuwei Feng, Qingfeng Ma, Xunming Ji
IMPORTANCE: Evidence supports using antiplatelet therapy in patients with acute ischemic stroke. However, neurological deterioration remains common under the currently recommended antiplatelet regimen, leading to poor clinical outcomes. OBJECTIVE: To determine whether intravenous tirofiban administered within 24 hours of stroke onset prevents early neurological deterioration in patients with acute noncardioembolic stroke compared with oral aspirin. DESIGN, SETTING, AND PARTICIPANTS: This investigator-initiated, multicenter, open-label, randomized clinical trial with blinded end-point assessment was conducted at 10 comprehensive stroke centers in China between September 2020 and March 2023...
April 22, 2024: JAMA Neurology
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