keyword
https://read.qxmd.com/read/38650989/bacterial-symbionts-in-oral-niche-use-type-vi-secretion-nanomachinery-for-fitness-increase-against-pathobionts
#1
JOURNAL ARTICLE
Jan Oscarsson, Kai Bao, Akiko Shiratsuchi, Jonas Grossmann, Witold Wolski, Kyaw Min Aung, Mark Lindholm, Anders Johansson, Ferdousi Rahman Mowsumi, Sun Nyunt Wai, Georgios N Belibasakis, Nagihan Bostanci
Microbial ecosystems experience spatial and nutrient restrictions leading to the coevolution of cooperation and competition among cohabiting species. To increase their fitness for survival, bacteria exploit machinery to antagonizing rival species upon close contact. As such, the bacterial type VI secretion system (T6SS) nanomachinery, typically expressed by pathobionts, can transport proteins directly into eukaryotic or prokaryotic cells, consequently killing cohabiting competitors. Here, we demonstrate for the first time that oral symbiont Aggregatibacter aphrophilus possesses a T6SS and can eliminate its close relative oral pathobiont Aggregatibacter actinomycetemcomitans using its T6SS...
May 17, 2024: IScience
https://read.qxmd.com/read/38648204/the-association-between-dioscorea-sansibarensis-and-orrella-dioscoreae-as-a-model-for-hereditary-leaf-symbiosis
#2
JOURNAL ARTICLE
Tessa Acar, Sandra Moreau, Marie-Françoise Jardinaud, Gabriella Houdinet, Felicia Maviane-Macia, Frédéric De Meyer, Bart Hoste, Olivier Leroux, Olivier Coen, Aurélie Le Ru, Nemo Peeters, Aurelien Carlier
Hereditary, or vertically-transmitted, symbioses affect a large number of animal species and some plants. The precise mechanisms underlying transmission of functions of these associations are often difficult to describe, due to the difficulty in separating the symbiotic partners. This is especially the case for plant-bacteria hereditary symbioses, which lack experimentally tractable model systems. Here, we demonstrate the potential of the leaf symbiosis between the wild yam Dioscorea sansibarensis and the bacterium Orrella dioscoreae (O...
2024: PloS One
https://read.qxmd.com/read/38647313/the-nucleoid-protein-hu-positively-regulates-the-expression-of-type-vi-secretion-systems-in-enterobacter-cloacae
#3
JOURNAL ARTICLE
Gabriela Hernández-Martínez, Miguel A Ares, Roberto Rosales-Reyes, Jorge Soria-Bustos, Jorge Antonio Yañez-Santos, María L Cedillo, Jorge A Girón, Ygnacio Martínez-Laguna, Fenfei Leng, J Antonio Ibarra, Miguel A De la Cruz
UNLABELLED: Enterobacter cloacae is an emerging pathogen isolated in healthcare-associated infections. A major virulence factor of this bacterium is the type VI secretion system (T6SS). The genome of E. cloacae harbors two T6SS gene clusters (T6SS-1 and T6SS-2), and the functional characterization of both systems showed that these two T6SSs are not expressed under the same conditions. Here, we report that the major histone-like protein HU positively regulates the expression of both T6SSs and, therefore, the function that each T6SS exerts in E...
April 22, 2024: MSphere
https://read.qxmd.com/read/38647123/insights-into-the-biosynthesis-of-palladium-nanoparticles-for-oxygen-reduction-reaction-by-genetically-engineered-bacteria-of-shewanella-oneidensis-mr-1
#4
JOURNAL ARTICLE
Shihui Li, Jingwen Huang, Linjun Tong, Qingxin Li, Haikun Zhou, Xiaoting Deng, Jin Zhou, Zhiyong Xie, Xueduan Liu, Yili Liang
Owing to the increasing need for green synthesis and environmental protection, the utilization of biological organism-derived carbons as supports for noble-metal electrocatalysts has garnered public interest. Nevertheless, the mechanism by which microorganisms generate nanometals has not been fully understood yet. In the present study, we used genetically engineered bacteria of Shewanella oneidensis MR-1 (∆SO4317, ∆SO4320, ∆SO0618 and ∆SO3745) to explore the effect of surface substances including biofilm-associated protein (bpfA), protein secreted by type I secretion systems (TISS) and type II secretion systems (T2SS), and lipopolysaccharide in microbial synthesis of metal nanoparticles...
April 2024: Microbial Biotechnology
https://read.qxmd.com/read/38646906/design-and-synthesis-of-mandelic-acid-derivatives-for-suppression-of-virulence-via-t3ss-against-citrus-canker
#5
JOURNAL ARTICLE
Yu-Qing Zhang, Xin Wang, Huabin Shi, Faisal Siddique, Jiaxin Xian, Aiting Song, Boli Wang, Zhibing Wu, Zi-Ning Cui
Citrus canker, a highly contagious bacterial disease caused by Xanthomonas citri subsp. citri ( Xcc ), poses a substantial threat to citrus crops, leading to serious reductions in fruit yield and economic losses. Most commonly used bactericides against Xcc lead to the rapid development of resistant subpopulations. Therefore, it is imperative to create novel drugs, such as type III secretion system (T3SS) inhibitors, that specifically target bacterial virulence factors rather than bacterial viability. In our study, we designed and synthesized a series of mandelic acid derivatives including 2-mercapto-1,3,4-thiazole...
April 22, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38645857/-preliminary-study-on-the-identification-of-aerobic-vaginitis-by-artificial-intelligence-analysis-system
#6
JOURNAL ARTICLE
Linling Ye, Fan Yu, Zhengqiang Hu, Xia Wang, Yuanting Tang
OBJECTIVE: To develop an artificial intelligence vaginal secretion analysis system based on deep learning and to evaluate the accuracy of automated microscopy in the clinical diagnosis of aerobic vaginitis (AV). METHODS: In this study, the vaginal secretion samples of 3769 patients receiving treatment at the Department of Obstetrics and Gynecology, West China Second Hospital, Sichuan University between January 2020 and December 2021 were selected. Using the results of manual microscopy as the control, we developed the linear kernel SVM algorithm, an artificial intelligence (AI) automated analysis software, with Python Scikit-learn script...
March 20, 2024: Sichuan da Xue Xue Bao. Yi Xue Ban, Journal of Sichuan University. Medical Science Edition
https://read.qxmd.com/read/38642539/optimizing-carbon-sources-regulation-in-the-biochemical-treatment-systems-for-coal-chemical-wastewater-aromatic-compounds-biodegradation-and-microbial-response-strategies
#7
JOURNAL ARTICLE
Lu Yang, Yongjun Liu, Chen Li, Pengfei Li, Aining Zhang, Zhe Liu, Zhu Wang, Chunxiao Wei, Zhuangzhuang Yang, Zhihua Li
The complex composition of coal chemical wastewater (CCW), marked by numerous highly toxic aromatic compounds, induces the destabilization of the biochemical treatment system, leading to suboptimal treatment efficacy. In this study, a biochemical treatment system was established to efficiently degrade aromatic compounds by quantitatively regulating the dosage of co-metabolized substrates (specifically, the chemical oxygen demand (COD) Glucose : COD Sodium acetate = 3:1, 1:3, and 1:1). The findings demonstrated that the system achieved optimal performance under the condition that the ratio of COD Glucose to COD Sodium acetate was 3:1...
April 17, 2024: Water Research
https://read.qxmd.com/read/38640341/pura-is-the-main-target-of-aurodox-a-type-iii-secretion-system-inhibitor
#8
JOURNAL ARTICLE
Yoshihiro Watanabe, Takeshi Haneda, Aoi Kimishima, Asaomi Kuwae, Takuya Suga, Takahiro Suzuki, Yoshiharu Iwabuchi, Masako Honsho, Sota Honma, Masato Iwatsuki, Hidehito Matsui, Hideaki Hanaki, Naoki Kanoh, Akio Abe, Yukihiro Asami, Satoshi Ōmura
Anti-microbial resistance (AMR) is one of the greatest threats to global health. The continual battle between the emergence of AMR and the development of drugs will be extremely difficult to stop as long as traditional anti-biotic approaches are taken. In order to overcome this impasse, we here focused on the type III secretion system (T3SS), which is highly conserved in many Gram-negative pathogenic bacteria. The T3SS is known to be indispensable in establishing disease processes but not essential for pathogen survival...
April 23, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38639920/potential-functionality-of-cutibacterium-acnes-extracellular-vesicles-in-atopic-dermatitis-and-acne-vulgaris-a-comparative-proteomic-analysis
#9
JOURNAL ARTICLE
Tianze Yu, Jin Chen, Shi Wu, Min Jiang, Ling Han, Ying Ma
BACKGROUND: Cutibacterium acnes is a commensal bacterium residing in healthy skin and plays a critical role in maintaining skin homeostasis. C. acnes has been considered closely related to acne vulgaris, while recent studies suggest that C. acnes and its metabolites may have a protective role in atopic dermatitis (AD) by modulating the immune system and maintaining skin homeostasis. Extracellular vesicles (EVs) are small membranous vesicles secreted by bacteria that participate in bacteria-host interactions...
April 19, 2024: Proteomics. Clinical Applications
https://read.qxmd.com/read/38637678/type-1-secretion-necessitates-a-tight-interplay-between-all-domains-of-the-abc-transporter
#10
JOURNAL ARTICLE
Manuel T Anlauf, Florestan L Bilsing, Jens Reiners, Olivia Spitz, Eymen Hachani, Sander H J Smits, Lutz Schmitt
Type I secretion systems (T1SS) facilitate the secretion of substrates in one step across both membranes of Gram-negative bacteria. A prime example is the hemolysin T1SS which secretes the toxin HlyA. Secretion is energized by the ABC transporter HlyB, which forms a complex together with the membrane fusion protein HlyD and the outer membrane protein TolC. HlyB features three domains: an N-terminal C39 peptidase-like domain (CLD), a transmembrane domain (TMD) and a C-terminal nucleotide binding domain (NBD)...
April 18, 2024: Scientific Reports
https://read.qxmd.com/read/38636877/a-new-strategy-for-accelerating-recovery-of-anaerobic-granular-sludge-after-low-temperature-shock-in-situ-regulation-of-quorum-sensing-microorganisms-embedded-in-polyvinyl-alcohol-sodium-alginate
#11
JOURNAL ARTICLE
Longyi Lv, Jiarui Chen, Ziyin Wei, Peng Hao, Pengfei Wang, Xiaoyang Liu, Wenfang Gao, Li Sun, Jinsong Liang, Zhijun Ren, Guangming Zhang, Weiguang Li
Low-temperature could inhibit the performance of anaerobic granular sludge (AnGS). Quorum sensing (QS), as a communication mode between microorganisms, can effectively regulate AnGS. In this study, a kind of embedded particles (PVA/SA@Serratia) based on signal molecule secreting bacteria was prepared by microbial immobilization technology based on polyvinyl alcohol and sodium alginate to accelerate the recovery of AnGS system after low temperature. Low-temperature shock experiment verified the positive effect of PVA/SA@Serratia on restoring the COD removal rate and methanogenesis capacity of AnGS...
April 16, 2024: Bioresource Technology
https://read.qxmd.com/read/38636658/cyclic-amp-binding-to-a-universal-stress-protein-in-mycobacterium-tuberculosis-is-essential-for-viability
#12
JOURNAL ARTICLE
Arka Banerjee, Moubani Chakraborty, Suruchi Sharma, Ruchi Chaturvedi, Avipsa Bose, Priyanka Biswas, Amit Singh, Sandhya S Visweswariah
Mycobacterial genomes encode multiple adenylyl cyclases and cAMP effector proteins, underscoring the diverse ways these bacteria utilize cAMP. We identified universal stress proteins (USP), Rv1636, and MSMEG_3811 in M. tuberculosis and M. smegmatis, respectively, as abundantly expressed, novel cAMP-binding proteins. Rv1636 is secreted via the SecA2 secretion system in M. tuberculosis but is not directly responsible for the efflux of cAMP from the cell. In slow-growing mycobacteria, intrabacterial concentrations of Rv1636 were equivalent to the concentrations of cAMP present in the cell...
April 16, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38625720/-pectobacterium-araliae-sp-nov-a-pathogen-causing-bacterial-soft-rot-of-japanese-angelica-tree-in-japan
#13
JOURNAL ARTICLE
Hiroyuki Sawada, Nobutaka Someya, Tomohiro Morohoshi, Mitsuaki Ono, Mamoru Satou
Phytopathogenic bacteria (MAFF 302110T and MAFF 302107) were isolated from lesions on Japanese angelica trees affected by bacterial soft rot in Yamanashi Prefecture, Japan. The strains were Gram-reaction-negative, facultatively anaerobic, motile with peritrichous flagella, rod-shaped, and non-spore-forming. The genomic DNA G+C content was 51.1 mol % and the predominant cellular fatty acids included summed feature 3 (C16 : 1  ω7 c and/or C16 : 1  ω6 c ), C16 : 0 , summed feature 8 (C18 : 1  ω7 c and/or C18 : 1  ω6 c ), summed feature 2 (comprising any combination of C12 : 0 aldehyde, an unknown fatty acid with an equivalent chain length of 10...
April 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38624198/old-role-with-new-feature-t2ss-atpase-as-a-cyclic-di-gmp-receptor-to-regulate-antibiotic-production
#14
JOURNAL ARTICLE
Haofei Liu, Gaoge Xu, Baodian Guo, Fengquan Liu
Cyclic di-GMP (c-di-GMP) is a crucial signaling molecule found extensively in bacteria, involved in the regulation of various physiological and biochemical processes such as biofilm formation, motility, and pathogenicity through binding to downstream receptors. However, the structural dissimilarity of c-di-GMP receptor proteins has hindered the discovery of many such proteins. In this study, we identified LspE, a homologous protein of the type II secretion system (T2SS) ATPase GspE in Lysobacter enzymogenes , as a receptor protein for c-di-GMP...
April 16, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38621869/-research-progress-of-traditional-chinese-medicines-as-quorum-sensing-inhibitors-in-collaboration-with-antibiotics-to-inhibit-drug-resistant-bacteria
#15
JOURNAL ARTICLE
Xin-Yue Liu, Chen-Ming Li, Chun-Xiao Lyu, Zi-Qiang Li, Yu-Hong Huang
Quorum sensing system regulates the expression of genes related to bacterial growth, metabolism and other behaviors by sensing bacterial density, and controls the unified action of the entire bacterial population. This mechanism can ensure the normal secretion of bacterial metabolites and the stability of the biofilm microenvironment, providing protection for the formation of biofilms and the normal growth and reproduction of bacteria. Traditional Chinese medicine, capable of quorum sensing inhibition, can inhibit the formation of bacterial biofilms, reduce bacterial resistance, and enhance the anti-infection ability of antibiotics when combined with antibiotics...
February 2024: Zhongguo Zhong Yao za Zhi, Zhongguo Zhongyao Zazhi, China Journal of Chinese Materia Medica
https://read.qxmd.com/read/38617309/liar-dependent-gene-expression-contributes-to-antimicrobial-responses-in-group-a-streptococcus
#16
Luis Alberto Vega, Misu Sansón-Iglesias, Piyali Mukherjee, Kyle Buchan, Gretchen Morrison, Anne E Hohlt, Anthony R Flores
The ability to sense and respond to host defenses is essential for pathogen survival. Some mechanisms involve two-component systems (TCS) that respond to host molecules, such as antimicrobial peptides (AMPs) and activate specific gene regulatory pathways to aid in survival. Alongside TCSs, bacteria coordinate cell division proteins, chaperones, cell wall sortases and secretory translocons at discrete locations within the cytoplasmic membrane, referred to as functional membrane microdomains (FMMs). In Group A Streptococcus (GAS), the FMM or "ExPortal" coordinates protein secretion, cell wall synthesis and sensing of AMP-mediated cell envelope stress via the LiaFSR three-component system...
April 4, 2024: bioRxiv
https://read.qxmd.com/read/38601936/tracking-and-characterization-of-a-novel-conjugative-transposon-identified-by-shotgun-transposon-mutagenesis
#17
JOURNAL ARTICLE
Jericho Ortañez, Patrick H Degnan
The horizontal transfer of mobile genetic elements (MGEs) is an essential process determining the functional and genomic diversity of bacterial populations. MGEs facilitate the exchange of fitness determinant genes like antibiotic resistance and virulence factors. Various computational methods exist to identify potential MGEs, but confirming their ability to transfer requires additional experimental approaches. Here, we apply a transposon (Tn) mutagenesis technique for confirming mobilization without the need for targeted mutations...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38600106/salmonella-exploits-membrane-reservoirs-for-invasion-of-host-cells
#18
JOURNAL ARTICLE
Hongxian Zhu, Andrew M Sydor, Kirsten C Boddy, Etienne Coyaud, Estelle M N Laurent, Aaron Au, Joel M J Tan, Bing-Ru Yan, Jason Moffat, Aleixo M Muise, Christopher M Yip, Sergio Grinstein, Brian Raught, John H Brumell
Salmonella utilizes a type 3 secretion system to translocate virulence proteins (effectors) into host cells during infection1 . The effectors modulate host cell machinery to drive uptake of the bacteria into vacuoles, where they can establish an intracellular replicative niche. A remarkable feature of Salmonella invasion is the formation of actin-rich protuberances (ruffles) on the host cell surface that contribute to bacterial uptake. However, the membrane source for ruffle formation and how these bacteria regulate membrane mobilization within host cells remains unclear...
April 10, 2024: Nature Communications
https://read.qxmd.com/read/38597609/evidence-for-intracellular-pseudomonas-aeruginosa
#19
REVIEW
Zachary J Resko, Rachel F Suhi, Adam V Thota, Abby R Kroken
Pseudomonas aeruginosa is a significant cause of global morbidity and mortality. Although it is often regarded as an extracellular pathogen toward human cells, numerous investigations report its ability to survive and replicate within host cells, and additional studies demonstrate specific mechanisms enabling it to adopt an intracellular lifestyle. This ability of P. aeruginosa remains less well-investigated than that of other intracellular bacteria, although it is currently gaining attention. If intracellular bacteria are not killed after entering host cells, they may instead receive protection from immune recognition and experience reduced exposure to antibiotic therapy, among additional potential advantages shared with other facultative intracellular pathogens...
April 10, 2024: Journal of Bacteriology
https://read.qxmd.com/read/38596842/groel-triggers-nlrp3-inflammasome-activation-through-the-tlr-nf-%C3%AE%C2%BAb-p-p65-axis-in-human-periodontal-ligament-stem-cells
#20
JOURNAL ARTICLE
Li Zhang, Mengmeng Duan, Xiaohua Pu, Huiling Zheng, Xinjie Ning, Ying Tu, Chunming Xu, Demao Zhang, Chengcheng Liu, Jing Xie
The interaction between bacteria and the host plays a vital role in the initiation and progression of systemic diseases, including gastrointestinal and oral diseases, due to the secretion of various virulence factors from these pathogens. GroEL, a potent virulence factor secreted by multiple oral pathogenic bacteria, is implicated in the damage of gingival epithelium, periodontal ligament, alveolar bone and other peripheral tissues. However, the underlying biomechanism is still largely unknown. In the present study, we verify that GroEL can trigger the activation of NLRP3 inflammasome and its downstream effector molecules, IL-1β and IL-18, in human periodontal ligament stem cells (hPDLSCs) and resultantly induce high activation of gelatinases (MMP-2 and MMP-9) to promote the degradation of extracellular matrix (ECM)...
April 10, 2024: Acta Biochimica et Biophysica Sinica
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