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Acidic stress yeast

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https://www.readbyqxmd.com/read/28818757/expression-of-a-na-h-antiporter-rtnhx1-from-a-recretohalophyte-reaumuria-trigyna-improved-salt-tolerance-of-transgenic-arabidopsis-thaliana
#1
Ningning Li, Xue Wang, Binjie Ma, Chao Du, Linlin Zheng, Yingchun Wang
Reaumuria trigyna is an endangered recretohalophyte and a small xeric shrub that is endemic to the eastern Alxa and western Ordos areas of Inner Mongolia, China. Using transcriptome data, we identified a 1662-bp open reading frame encoding a 553-amino-acid protein corresponding to a Na(+)/H(+) antiporter (RtNHX1) from R. trigyna. RtNHX1 was rapidly up-regulated by NaCl and exogenous abscisic acid treatment and had different tissue-specific expression patterns before and after salt-stress treatment. Overexpression of RtNHX1 enhanced seed germination, biomass accumulation, chlorophyll content, and root elongation in transgenic Arabidopsis plants under salt stress and rescued the salt-sensitive deficiencies of the nhx1 mutant...
July 25, 2017: Journal of Plant Physiology
https://www.readbyqxmd.com/read/28818377/heterologous-expression-of-gmsip1-3-from-soybean-in-tobacco-showed-and-growth-retardation-and-tolerance-to-hydrogen-peroxide
#2
Dayong Zhang, Yihong Huang, Manoj Kumar, Qun Wan, Zhaolong Xu, Hongbo Shao, Girdhar K Pandey
Aquaporins (AQPs) are transmembrane protein channels that are members of Major Intrinsic Proteins (MIP) superfamily. AQPs play important roles in plant reproduction, cell elongation, osmoregulation, influence leaf physiology and are responsive to drought and salt tolerance. Small intrinsic proteins (SIPs)belongs to one of the groups of AQPs, which are mainly localized to endoplasmic reticulum(ER). While this group of aquaporin is being well studied in Arabidopsis, grape and other plant species, not much is known about the molecular regulatory mechanisms driven by ER-type AQPs in Glycine Max...
October 2017: Plant Science: An International Journal of Experimental Plant Biology
https://www.readbyqxmd.com/read/28813005/identification-and-functional-divergence-analysis-of-wox-gene-family-in-paper-mulberry
#3
Feng Tang, Naizhi Chen, Meiling Zhao, Yucheng Wang, Ruiping He, Xianjun Peng, Shihua Shen
The WOX (WUSCHEL-related homeobox) is a plant-specific transcription factor involved in plant development and stress response. However, few studies have been reported on the WOX gene in woody plants. In this study, 10 BpWOX genes were isolated from paper mulberry by RACE-PCR and categorized into three clades through phylogenetic analysis, ancient, intermediate and WUS clade. Among them, five members had the transcriptional activity detected by yeast one-hybrid and seven were uniquely localized to the nucleus through green fluorescent protein (GFP) observation...
August 16, 2017: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/28798999/influence-of-immunostimulant-polysaccharides-nucleic-acids-and-bacillus-strains-on-the-innate-immune-and-acute-stress-response-in-turbots-scophthalmus-maximus-fed-soy-bean-and-wheat-based-diets
#4
V I Fuchs, J Schmidt, M J Slater, B H Buck, D Steinhagen
Immunostimulants are widely applied in aquaculture practice and may have beneficial effects on the immune system and physical functions allowing higher tolerance to stress. In the current study, the impact of four (i-iv) dietary active ingredients on the immune and stress response of turbot was examined in two experiments (I and II). A basal low fish meal (FM; 32%) diet was formulated and supplemented with (i) yeast β-glucan and mannan oligosaccharide (GM), (ii) alginic acid (AC), (iii) yeast nucleotides and RNA (NR), or (iv) Bacillus strains (BS)...
August 10, 2017: Fish Physiology and Biochemistry
https://www.readbyqxmd.com/read/28780590/alpha-ketoglutarate-enhances-freeze-thaw-tolerance-and-prevents-carbohydrate-induced-cell-death-of-the-yeast-saccharomyces-cerevisiae
#5
Maria M Bayliak, Olha V Hrynkiv, Roksolana V Knyhynytska, Volodymyr I Lushchak
Stress resistance and fermentative capability are important quality characteristics of baker's yeast. In the present study, we examined protective effects of exogenous alpha-ketoglutarate (AKG), an intermediate of the tricarboxylic acid cycle and amino acid metabolism, against freeze-thaw and carbohydrate-induced stresses in the yeast Saccharomyces cerevisiae. Growth on AKG-supplemented medium prevented a loss of viability and improved fermentative capacity of yeast cells after freeze-thaw treatment. The cells grown in the presence of AKG had higher levels of amino acids (e...
August 5, 2017: Archives of Microbiology
https://www.readbyqxmd.com/read/28776098/transcriptome-analysis-of-the-thermotolerant-yeast-kluyveromyces-marxianus-cct-7735-under-ethanol-stress
#6
Raphael Hermano Santos Diniz, Juan C Villada, Mariana Caroline Tocantins Alvim, Pedro Marcus Pereira Vidigal, Nívea Moreira Vieira, Mónica Lamas-Maceiras, María Esperanza Cerdán, María-Isabel González-Siso, Petri-Jaan Lahtvee, Wendel Batista da Silveira
The thermotolerant yeast Kluyveromyces marxianus displays a potential to be used for ethanol production from both whey and lignocellulosic biomass at elevated temperatures, which is highly alluring to reduce the cost of the bioprocess. Nevertheless, contrary to Saccharomyces cerevisiae, K. marxianus cannot tolerate high ethanol concentrations. We report the transcriptional profile alterations in K. marxianus under ethanol stress in order to gain insights about mechanisms involved with ethanol response. Time-dependent changes have been characterized under the exposure of 6% ethanol and compared with the unstressed cells prior to the ethanol addition...
August 3, 2017: Applied Microbiology and Biotechnology
https://www.readbyqxmd.com/read/28774891/sterol-transporters-at-membrane-contact-sites-regulate-torc1-and-torc2-signaling
#7
Andrew Murley, Justin Yamada, Bradley J Niles, Alexandre Toulmay, William A Prinz, Ted Powers, Jodi Nunnari
Membrane contact sites (MCSs) function to facilitate the formation of membrane domains composed of specialized lipids, proteins, and nucleic acids. In cells, membrane domains regulate membrane dynamics and biochemical and signaling pathways. We and others identified a highly conserved family of sterol transport proteins (Ltc/Lam) localized at diverse MCSs. In this study, we describe data indicating that the yeast family members Ltc1 and Ltc3/4 function at the vacuole and plasma membrane, respectively, to create membrane domains that partition upstream regulators of the TORC1 and TORC2 signaling pathways to coordinate cellular stress responses with sterol homeostasis...
August 3, 2017: Journal of Cell Biology
https://www.readbyqxmd.com/read/28774847/dietary-supplementation-of-organic-selenium-improves-growth-survival-antioxidant-and-immune-status-of-meagre-argyrosomus-regius-juveniles
#8
Abdallah Tag-Eldein Mansour, Ashraf Abdelsamee Goda, Eglal Ali Omar, Hala Saber Khalil, Maria Ángeles Esteban
Oxidative stress is considered one of the main obstacles to immune competence and high mortality rate of marine fish larvae due to the high dietary polyunsaturated fatty acids and accelerated metabolic rate. This study was carried out to assess the effect of different dietary selenium (Se) yeast on growth, antioxidant status, hematological changes, and cellular and humoral immune parameters in meagre (Argyrosomus regius). Juvenile specimens (3.20 ± 0.17 g) were randomly assigned to four experimental groups, a control group fed a basal diet and another three groups fed Se-supplemented diets at doses of 1, 2 and 3 mg Se-yeast kg(-1) diet for 63 days and the final analyzed selenium concentrations were 0...
July 31, 2017: Fish & Shellfish Immunology
https://www.readbyqxmd.com/read/28771613/activation-of-gcn2-in-response-to-different-stresses
#9
Silje Anda, Róbert Zach, Beáta Grallert
All organisms have evolved pathways to respond to different forms of cellular stress. The Gcn2 kinase is best known as a regulator of translation initiation in response to starvation for amino acids. Work in budding yeast has showed that the molecular mechanism of GCN2 activation involves the binding of uncharged tRNAs, which results in a conformational change and GCN2 activation. This pathway requires GCN1, which ensures delivery of the uncharged tRNA onto GCN2. However, Gcn2 is activated by a number of other stresses which do not obviously involve accumulation of uncharged tRNAs, raising the question how Gcn2 is activated under these conditions...
2017: PloS One
https://www.readbyqxmd.com/read/28768829/the-saga-complex-together-with-transcription-factors-and-the-endocytic-protein-rvs167p-coordinate-the-reprofiling-of-gene-expression-in-response-to-changes-in-sterol-composition-in-saccharomyces-cerevisiae
#10
Gisèle Dewhurst-Maridor, Daniel Abegg, Fabrice P A David, Jacques Rougemont, Cameron C Scott, Alexander Adibekian, Howard Riezman
Changes in cellular sterol species and concentrations can have profound effects on the transcriptional profile. In yeast, mutants defective in sterol biosynthesis show a wide range of changes in transcription, including a co-induction of anaerobic genes and ergosterol biosynthesis genes, biosynthesis of basic amino acids, and several stress genes. However the mechanisms underlying these changes are unknown. We identified mutations in the SAGA complex, a co-activator of transcription, which abrogate the ability to carry out most of these sterol-dependent transcriptional changes...
August 2, 2017: Molecular Biology of the Cell
https://www.readbyqxmd.com/read/28763022/characterization-and-expression-profiling-of-camellia-sinensis-cinnamate-4-hydroxylase-genes-in-phenylpropanoid-pathways
#11
Jinxin Xia, Yajun Liu, Shengbo Yao, Ming Li, Mengqing Zhu, Keyi Huang, Liping Gao, Tao Xia
Cinnamate 4-hydroxylase (C4H), a cytochrome P450-dependent monooxygenase, participates in the synthesis of numerous polyphenoid compounds, such as flavonoids and lignins. However, the C4H gene number and function in tea plants are not clear. We screened all available transcriptome and genome databases of tea plants and three C4H genes were identified and named CsC4Ha, CsC4Hb, and CsC4Hc, respectively. Both CsC4Ha and CsC4Hb have 1518-bp open reading frames that encode 505-amino acid proteins. CsC4Hc has a 1635-bp open reading frame that encodes a 544-amino acid protein...
August 1, 2017: Genes
https://www.readbyqxmd.com/read/28757599/different-metabolic-pathways-are-involved-in-response-of-saccharomyces-cerevisiae-to-l-a-and-m-viruses
#12
Juliana Lukša, Bazilė Ravoitytė, Aleksandras Konovalovas, Lina Aitmanaitė, Anzhelika Butenko, Vyacheslav Yurchenko, Saulius Serva, Elena Servienė
Competitive and naturally occurring yeast killer phenotype is governed by coinfection with dsRNA viruses. Long-term relationship between the host cell and viruses appear to be beneficial and co-adaptive; however, the impact of viral dsRNA on the host gene expression has barely been investigated. Here, we determined the transcriptomic profiles of the host Saccharomyces cerevisiae upon the loss of the M-2 dsRNA alone and the M-2 along with the L-A-lus dsRNAs. We provide a comprehensive study based on the high-throughput RNA-Seq data, Gene Ontology and the analysis of the interaction networks...
July 25, 2017: Toxins
https://www.readbyqxmd.com/read/28747907/membrane-phosphoproteomics-of-yeast-early-response-to-acetic-acid-role-of-hrk1-kinase-and-lipid-biosynthetic-pathways-in-particular-sphingolipids
#13
Joana F Guerreiro, Nuno P Mira, Aline X S Santos, Howard Riezman, Isabel Sá-Correia
Saccharomyces cerevisiae response and tolerance to acetic acid is critical in industrial biotechnology and in acidic food and beverages preservation. The HRK1 gene, encoding a protein kinase of unknown function belonging to the "Npr1-family" of kinases known to be involved in the regulation of plasma membrane transporters, is an important determinant of acetic acid tolerance. This study was performed to identify the alterations occurring in yeast membrane phosphoproteome profile during the adaptive early response to acetic acid stress (following 1 h of exposure to a sub-lethal inhibitory concentration; 50 mM at pH 4...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28747041/influence-of-commercial-inactivated-yeast-derivatives-on-the-survival-of-probiotic-bacterium-lactobacillus-rhamnosus-hn001-in-an-acidic-environment
#14
Mingzhan Toh, Shao Quan Liu
This study evaluated the influence of three inactivated yeast derivatives (IYDs) used in wine production, namely OptiRed(®), OptiWhite(®) and Noblesse(®), on the viability of the probiotic strain Lactobacillus rhamnosus HN001 in an acidic environment. Addition of the IYDs at 3 g/L significantly enhanced the survival of the probiotic bacteria by 2.75-4.05 log cycles after 10-h exposure in a pH 3.0 buffer. Acid stress assay with IYD components obtained after centrifugation and filtration revealed that water-soluble compounds were responsible for improving the acid tolerance of L...
December 2017: AMB Express
https://www.readbyqxmd.com/read/28732554/microbial-ecology-and-process-technology-of-sourdough-fermentation
#15
Luc De Vuyst, Simon Van Kerrebroeck, Frédéric Leroy
From a microbiological perspective, sourdough is to be considered as a specific and stressful ecosystem, harboring yeasts and lactic acid bacteria (LAB), that is used for the production of baked goods. With respect to the metabolic impact of the sourdough microbiota, acidification (LAB), flavor formation (LAB and yeasts), and leavening (yeasts and heterofermentative LAB species) are most noticeable. Three distinct types of sourdough fermentation processes can be discerned based on the inocula applied, namely backslopped ones (type 1), those initiated with starter cultures (type 2), and those initiated with a starter culture followed by backslopping (type 3)...
2017: Advances in Applied Microbiology
https://www.readbyqxmd.com/read/28725267/heterologous-co-expression-of-a-yeast-diacylglycerol-acyltransferase-scdga1-and-a-plant-oleosin-atoleo3-as-an-efficient-tool-for-enhancing-triacylglycerol-accumulation-in-the-marine-diatom-phaeodactylum-tricornutum
#16
Nodumo Nokulunga Zulu, Jennifer Popko, Krzysztof Zienkiewicz, Pablo Tarazona, Cornelia Herrfurth, Ivo Feussner
BACKGROUND: Microalgae are promising alternate and renewable sources for producing valuable products such as biofuel and essential fatty acids. Although this is the case, there are still challenges impeding on the effective commercial production of microalgal products. For instance, their product yield is still too low. Therefore, this study was oriented towards enhancing triacylglycerol (TAG) accumulation in the diatom Phaeodactylum tricornutum (strain Pt4). To achieve this, a type 2 acyl-CoA:diacylglycerol acyltransferase from yeast (ScDGA1) and the lipid droplet (LD) stabilizing oleosin protein 3 from Arabidopsis thaliana (AtOLEO3) were expressed in Pt4...
2017: Biotechnology for Biofuels
https://www.readbyqxmd.com/read/28712705/engineering-of-global-regulators-and-cell-surface-properties-toward-enhancing-stress-tolerance-in-saccharomyces-cerevisiae
#17
REVIEW
Kouichi Kuroda, Mitsuyoshi Ueda
Microbial cell factories are subject to various stresses, leading to the reductions of metabolic activity and bioproduction efficiency. Therefore, the development of stress-tolerant microorganisms is important for improving bio-production efficiency. Recently, modifications of cell surface properties and master regulators have been shown to be effective approaches for enhancing stress tolerance. The cell surface is an attractive target owing to its interactions with the environment and its role in transmitting environmental information...
July 13, 2017: Journal of Bioscience and Bioengineering
https://www.readbyqxmd.com/read/28710262/med15b-regulates-acid-stress-response-and-tolerance-in-candida-glabrata
#18
Yanli Qi, Hui Liu, Jiayin Yu, Xiulai Chen, Liming Liu
Candida glabrata is a promising producer of organic acids. To elucidate the physiological function of the Mediator tail subunit Med15B in the response to low pH stress, we constructed a deletion strain, med15BΔ, and overexpression strain, HTUΔ/CgMED15B Deletion of MED15B caused biomass production, glucose consumption rate, and cell viability to decrease by 28.3%, 31.7%, and 26.5%, respectively, compared with those of the parent strain (HTUΔ) at pH 2.0. Expression of lipid metabolism-related genes was significantly downregulated in the med15BΔ strain, whereas key genes of ergosterol biosynthesis showed abnormal upregulation...
July 14, 2017: Applied and Environmental Microbiology
https://www.readbyqxmd.com/read/28702017/acetic-acid-causes-endoplasmic-reticulum-stress-and-induces-the-unfolded-protein-response-in-saccharomyces-cerevisiae
#19
Nozomi Kawazoe, Yukio Kimata, Shingo Izawa
Since acetic acid inhibits the growth and fermentation ability of Saccharomyces cerevisiae, it is one of the practical hindrances to the efficient production of bioethanol from a lignocellulosic biomass. Although extensive information is available on yeast response to acetic acid stress, the involvement of endoplasmic reticulum (ER) and unfolded protein response (UPR) has not been addressed. We herein demonstrated that acetic acid causes ER stress and induces the UPR. The accumulation of misfolded proteins in the ER and activation of Ire1p and Hac1p, an ER-stress sensor and ER stress-responsive transcription factor, respectively, were induced by a treatment with acetic acid stress (>0...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28681139/a-novel-ap2-erf-family-transcription-factor-from-glycine-soja-gserf71-is-a-dna-binding-protein-that-positively-regulates-alkaline-stress-tolerance-in-arabidopsis
#20
Yang Yu, Xiangbo Duan, Xiaodong Ding, Chao Chen, Dan Zhu, Kuide Yin, Lei Cao, Xuewei Song, Pinghui Zhu, Qiang Li, Zaib Un Nisa, Jiyang Yu, Jianying Du, Yu Song, Huiqing Li, Beidong Liu, Yanming Zhu
Here we first found that GsERF71, an ERF factor from wild soybean could increase plant alkaline stress tolerance by up-regulating H+-ATPase and by modifing the accumulation of Auxin. Alkaline soils are widely distributed all over the world and greatly limit plant growth and development. In our previous transcriptome analyses, we have identified several ERF (ethylene-responsive factor) genes that responded strongly to bicarbonate stress in the roots of wild soybean G07256 (Glycine soja). In this study, we cloned and functionally characterized one of the genes, GsERF71...
July 2017: Plant Molecular Biology
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