keyword
https://read.qxmd.com/read/36974006/hereditary-cancer-predispositions-comparison-of-multigene-panel-sequencing-on-fresh-frozen-breast-ovarian-tumor-versus-blood
#21
JOURNAL ARTICLE
Mathias Schwartz, Virginie Moncoutier, Adrien Peytral, Jessica Le Gall, Voreak Suybeng, Mélanie Pagès, Julien Masliah-Planchon, Olfa Trabelsi-Grati, Samia Melaabi, Céline Callens, Ivan Bièche, Hélène Delhomelle, Antoine De Pauw, Claire Saule, Emmanuelle Mouret-Fourme, Marion Gauthier-Villars, Bruno Buecher, Chrystelle Colas, Dominique Stoppa-Lyonnet, Lisa Golmard
In breast or ovarian cancer (BC/OC) patients with evocative personal and/or family history, multigene panel sequencing is performed on blood to diagnose hereditary predispositions. Additionally, BRCA1/BRCA2 testing can be performed on tumor sample for therapeutic purpose. The accuracy of multigene panel tumor analysis on BC/OC to detect predisposing germline pathogenic variants (gPV) has not been precisely assessed. By comparing sequencing data from blood and fresh-frozen tumor we show that tumor genomic instability causes pitfalls to consider when performing tumor testing to detect gPV...
March 27, 2023: Clinical Genetics
https://read.qxmd.com/read/36969410/in-silico-based-structural-evaluation-to-categorize-the-pathogenicity-of-mutations-identified-in-the-rad-class-of-proteins
#22
JOURNAL ARTICLE
Aaliya Anwaar, Ashok K Varma, Reshita Baruah
RAD genes, known as double-strand break repair proteins, play a major role in maintaining the genomic integrity of a cell by carrying out essential DNA repair functions via double-strand break repair pathways. Mutations in the RAD class of proteins show high susceptibility to breast and ovarian cancers; however, adequate research on the mutations identified in these genes has not been extensively reported for their deleterious effects. Changes in the folding pattern of RAD proteins play an important role in protein-protein interactions and also functions...
March 21, 2023: ACS Omega
https://read.qxmd.com/read/36856935/pathogenic-variants-among-females-with-breast-cancer-and-a-non-breast-cancer-reveal-opportunities-for-cancer-interception
#23
JOURNAL ARTICLE
Brittany L Bychkovsky, Min-Tzu Lo, Amal Yussuf, Carrie Horton, Parichehr Hemyari, Holly LaDuca, Judy E Garber, Rochelle Scheib, Huma Q Rana
PURPOSE: Herein, we report the frequency and distribution of germline pathogenic variants (PVs) among females with breast cancer (BC) and at least one other non-BC who underwent multi-gene panel testing (MGPT). Among females with PVs diagnosed first with BC or ovarian cancer (OC), we sought to enumerate the frequency of subsequent PV-associated cancers. METHODS: Females with BC and cancer of ≥ 1 other site (multiple primary cancers, MPC) who underwent MGPT through Ambry Genetics from March 2012 to December 2016 were included if they had testing of at least 21 genes of interest (ATM, BARD1, BRCA1, BRCA2, BRIP1, CDH1, CHEK2, EPCAM, MLH1, MSH2, MSH6, MUTYH, NBN, NF1, PALB2, PMS2, PTEN, RAD51C, RAD51D, STK11, and TP53)...
March 1, 2023: Breast Cancer Research and Treatment
https://read.qxmd.com/read/36853301/prevalence-of-pathogenic-germline-mutations-in-13-hereditary-cancer-related-genes-in-breast-cancer-patients-in-narathiwat-province-thailand
#24
JOURNAL ARTICLE
Panupong Sukpan, Kanyanatt Kanokwiroon, Hutcha Sriplung, Wison Laochareonsuk, Pongsakorn Choochuen, Nasuha Auseng, Kasemsun Wanawanakorn, Surasak Sangkhathat
BACKGROUND: BRCA1 and BRCA2 genes are known to increase breast cancer's lifetime risk. Early identification of women with this inherited risk can potentially reduce the risk of breast and/or ovarian cancer and, together with early screening, decrease the mortality rate. OBJECTIVE: This study explored the frequency and distribution of genetic variants in consecutive cases of breast cancer in Narathiwat province, one of the three provinces in the southernmost Thai border...
February 1, 2023: Asian Pacific Journal of Cancer Prevention: APJCP
https://read.qxmd.com/read/36833203/molecular-genetic-characteristics-of-fanci-a-proposed-new-ovarian-cancer-predisposing-gene
#25
JOURNAL ARTICLE
Caitlin T Fierheller, Wejdan M Alenezi, Corinne Serruya, Timothée Revil, Setor Amuzu, Karine Bedard, Deepak N Subramanian, Eleanor Fewings, Jeffrey P Bruce, Stephenie Prokopec, Luigi Bouchard, Diane Provencher, William D Foulkes, Zaki El Haffaf, Anne-Marie Mes-Masson, Marc Tischkowitz, Ian G Campbell, Trevor J Pugh, Celia M T Greenwood, Jiannis Ragoussis, Patricia N Tonin
FANCI was recently identified as a new candidate ovarian cancer (OC)-predisposing gene from the genetic analysis of carriers of FANCI c.1813C>T; p.L605F in OC families. Here, we aimed to investigate the molecular genetic characteristics of FANCI, as they have not been described in the context of cancer. We first investigated the germline genetic landscape of two sisters with OC from the discovery FANCI c.1813C>T; p.L605F family (F1528) to re-affirm the plausibility of this candidate. As we did not find other conclusive candidates, we then performed a candidate gene approach to identify other candidate variants in genes involved in the FANCI protein interactome in OC families negative for pathogenic variants in BRCA1 , BRCA2 , BRIP1 , RAD51C , RAD51D , and FANCI , which identified four candidate variants...
January 20, 2023: Genes
https://read.qxmd.com/read/36724586/beyond-brca-patterns-of-risk-reducing-surgery-for-non-brca-homologous-recombination-repair-pathway-gene-variant-carriers
#26
JOURNAL ARTICLE
Sarah S Lee, Hannah C Karpel, Cheongeun Oh, Julia Smith, Bhavana Pothuri
OBJECTIVE: The real-world management of patients with non-BRCA, homologous recombination repair pathway variants with increased or uncertain risks of ovarian cancer is unknown. The objective was to determine the adoption of risk-reducing salpingo-oophorectomy (RRSO) for carriers of variants with increased or uncertain risks of ovarian cancer beyond BRCA. METHODS: This was a retrospective cohort study of patients at three hospitals with non-BRCA, homologous recombination repair pathway variants with increased risk (BRIP1, RAD51C, RAD51D) and uncertain risk (ATM, BARD1, NBN, PALB2) of ovarian cancer...
January 30, 2023: Gynecologic Oncology
https://read.qxmd.com/read/36562461/functional-analysis-of-germline-rad51c-missense-variants-highlight-the-role-of-rad51c-in-replication-fork-protection
#27
JOURNAL ARTICLE
Arun Mouli Kolinjivadi, Siao Ting Chong, Ramveer Choudhary, Haresh Sankar, Ee Ling Chew, Claresta Yeo, Sock Hoai Chan, Joanne Ngeow
Monoallelic or biallelic RAD51C germline mutations results in chromosome instability disorders such as fanconi anemia (FA) and cancers. The bona fide function of RAD51C is to assist RAD51 nucleoprotein filament onto single strand DNA to complete Homologous Recombination (HR) repair. In addition to HR repair, the role of RAD51C in DNA replication is emerging when replication forks are transiently or irreversibly stalled. We identified novel RAD51C variants of uncertain significance (VUS) from breast, ovarian, pancreatic, and gastric cancer patients and functionally characterized the effect of these variants in replication fork protection and double-strand breaks (DSB's) repair...
December 23, 2022: Human Molecular Genetics
https://read.qxmd.com/read/36551643/pathogenic-variant-spectrum-in-breast-cancer-risk-genes-in-finnish-patients
#28
JOURNAL ARTICLE
Anna K Nurmi, Maija Suvanto, Joe Dennis, Kristiina Aittomäki, Carl Blomqvist, Heli Nevanlinna
Recurrent pathogenic variants have been detected in several breast and ovarian cancer (BC/OC) risk genes in the Finnish population. We conducted a gene-panel sequencing and copy number variant (CNV) analysis to define a more comprehensive spectrum of pathogenic variants in BRCA1 , BRCA2 , PALB2 , CHEK2 , ATM , BARD1 , RAD51C , RAD51D , BRIP1 , and FANCM genes in Finnish BC patients. The combined frequency of pathogenic variants in the BRCA1/2 genes was 1.8% in 1356 unselected patients, whereas variants in the other genes were detected altogether in 8...
December 14, 2022: Cancers
https://read.qxmd.com/read/36411032/uk-consensus-recommendations-for-clinical-management-of-cancer-risk-for-women-with-germline-pathogenic-variants-in-cancer-predisposition-genes-rad51c-rad51d-brip1-and-palb2
#29
JOURNAL ARTICLE
Helen Hanson, Anjana Kulkarni, Lucy Loong, Grace Kavanaugh, Bethany Torr, Sophie Allen, Munaza Ahmed, Antonis C Antoniou, Ruth Cleaver, Tabib Dabir, D Gareth Evans, Ellen Golightly, Rosalyn Jewell, Kelly Kohut, Ranjit Manchanda, Alex Murray, Jennie Murray, Kai-Ren Ong, Adam N Rosenthal, Emma Roisin Woodward, Diana M Eccles, Clare Turnbull, Marc Tischkowitz, Fiona Lalloo
Germline pathogenic variants (GPVs) in the cancer predisposition genes BRCA1 , BRCA2 , MLH1 , MSH2 , MSH6 , BRIP1 , PALB2 , RAD51D and RAD51C are identified in approximately 15% of patients with ovarian cancer (OC). While there are clear guidelines around clinical management of cancer risk in patients with GPV in BRCA1 , BRCA2 , MLH1 , MSH2 and MSH6 , there are few guidelines on how to manage the more moderate OC risk in patients with GPV in BRIP1 , PALB2 , RAD51D and RAD51C , with clinical questions about appropriateness and timing of risk-reducing gynaecological surgery...
November 21, 2022: Journal of Medical Genetics
https://read.qxmd.com/read/36315097/somatic-inactivation-of-breast-cancer-predisposition-genes-in-tumours-associated-with-pathogenic-germline-variants
#30
JOURNAL ARTICLE
Belle W X Lim, Na Li, Sakshi Mahale, Simone Mcinerny, Magnus Zethoven, Simone M Rowley, Joanne Huynh, Theresa Wang, Jue Er Amanda Lee, Mia Friedman, Lisa Devereux, Rodney J Scott, Erica K Sloan, Paul A James, Ian G Campbell
BACKGROUND: Breast cancers (BC) that arise in individuals heterozygous for a germline pathogenic variant in a susceptibility gene, such as BRCA1/2, PALB2 and RAD51C, have been shown to exhibit bi-allelic loss in the respective genes, and be associated with triple-negative (TN) BC and distinctive somatic mutational signatures. Tumour sequencing thus presents an orthogonal approach to assess the role of candidate genes in BC development. METHODS: Exome sequencing was performed on paired normal-breast tumour DNA from 124 carriers of germline loss-of-function (LoF) or missense (MS) mutations carriers in 15 known and candidate BC predisposition genes identified in the BEACCON case-control study...
October 31, 2022: Journal of the National Cancer Institute
https://read.qxmd.com/read/36307613/interdisciplinary-risk-counseling-for-hereditary-breast-and-ovarian-cancer-real-world-data-from-a-specialized-center
#31
JOURNAL ARTICLE
Benedikt Zang, Malina Helms, Laura Besch, Nanette Kalmbach, Stephanie Stegen, Jens-Uwe Blohmer, Dorothee Speiser
PURPOSE: Hereditary breast and ovarian cancer has long been established to affect a considerable number of patients and their families. By identifying those at risk ideally before they have been diagnosed with breast and/or ovarian cancer, access to preventive measures, intensified screening and special therapeutic options can be obtained, and thus, prognosis can be altered beneficially. Therefore, a standardized screening and counseling process has been established in Germany under the aegis of the German Consortium for Hereditary Breast and Ovarian Cancer (GC-HBOC)...
October 28, 2022: Archives of Gynecology and Obstetrics
https://read.qxmd.com/read/36292577/increased-risk-of-hereditary-prostate-cancer-in-italian-families-with-hereditary-breast-and-ovarian-cancer-syndrome-harboring-mutations-in-brca-and-in-other-susceptibility-genes
#32
JOURNAL ARTICLE
Giovanna D'Elia, Gemma Caliendo, Maria-Myrsini Tzioni, Luisa Albanese, Luana Passariello, Anna Maria Molinari, Maria Teresa Vietri
Hereditary prostate cancer (HPCa) has the highest heritability of any cancer in men. Interestingly, it occurs in several hereditary syndromes, including breast and ovarian cancer (HBOC) and Lynch syndrome (LS). Several gene mutations related to these syndromes have been identified as biomarkers in HPCa. The goal of this study was to screen for germline mutations in susceptibility genes by using a multigene panel, and to subsequently correlate the results with clinical and laboratory parameters. This was undertaken in 180 HBOC families, which included 217 males with prostate cancer (PCa)...
September 21, 2022: Genes
https://read.qxmd.com/read/36233090/moderate-risk-genes-for-hereditary-ovarian-cancers-involved-in-the-homologous-recombination-repair-pathway
#33
REVIEW
Akiko Abe, Issei Imoto, Arisa Ueki, Hidetaka Nomura, Hiroyuki Kanao
Approximately 20% of cases of epithelial ovarian cancer (EOC) are hereditary, sharing many causative genes with breast cancer. The lower frequency of EOC compared to breast cancer makes it challenging to estimate absolute or relative risk and verify the efficacy of risk-reducing surgery in individuals harboring germline pathogenic variants (GPV) in EOC predisposition genes, particularly those with relatively low penetrance. Here, we review the molecular features and hereditary tumor risk associated with several moderate-penetrance genes in EOC that are involved in the homologous recombination repair pathway, i...
October 4, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36232793/increased-co-occurrence-of-pathogenic-variants-in-hereditary-breast-and-ovarian-cancer-and-lynch-syndromes-a-consequence-of-multigene-panel-genetic-testing
#34
Mar Infante, Mónica Arranz-Ledo, Enrique Lastra, Luis Enrique Abella, Raquel Ferreira, Marta Orozco, Lara Hernández, Noemí Martínez, Mercedes Durán
The probability of carrying two pathogenic variants (PVs) in dominant cancer-predisposing genes for hereditary breast and ovarian cancer and lynch syndromes in the same patient is uncommon, except in populations where founder effects exist. Two breast cancer women that are double heterozygotes (DH) for both BRCA1/BRCA2 , one ovarian cancer case DH for BRCA1/RAD51C, and another breast and colorectal cancer who is DH for BRCA2/PMS2 were identified in our cohort. Ages at diagnosis and severity of disease in BRCA1/BRCA2 DH resembled BRCA1 single-carrier features...
September 29, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36162852/prospective-validation-of-the-boadicea-multifactorial-breast-cancer-risk-prediction-model-in-a-large-prospective-cohort-study
#35
JOURNAL ARTICLE
Xin Yang, Mikael Eriksson, Kamila Czene, Andrew Lee, Goska Leslie, Michael Lush, Jean Wang, Joe Dennis, Leila Dorling, Sara Carvalho, Nasim Mavaddat, Jacques Simard, Marjanka K Schmidt, Douglas F Easton, Per Hall, Antonis C Antoniou
BACKGROUND: The multifactorial Breast and Ovarian Analysis of Disease Incidence and Carrier Estimation Algorithm (BOADICEA) breast cancer risk prediction model has been recently extended to consider all established breast cancer risk factors. We assessed the clinical validity of the model in a large independent prospective cohort. METHODS: We validated BOADICEA (V.6) in the Swedish KARolinska Mammography Project for Risk Prediction of Breast Cancer (KARMA) cohort including 66 415 women of European ancestry (median age 54 years, IQR 45-63; 816 incident breast cancers) without previous cancer diagnosis...
December 2022: Journal of Medical Genetics
https://read.qxmd.com/read/36162851/enhancing-the-boadicea-cancer-risk-prediction-model-to-incorporate-new-data-on-rad51c-rad51d-bard1-updates-to-tumour-pathology-and-cancer-incidence
#36
JOURNAL ARTICLE
Andrew Lee, Nasim Mavaddat, Alex Cunningham, Tim Carver, Lorenzo Ficorella, Stephanie Archer, Fiona M Walter, Marc Tischkowitz, Jonathan Roberts, Juliet Usher-Smith, Jacques Simard, Marjanka K Schmidt, Peter Devilee, Vesna Zadnik, Hannes Jürgens, Emmanuelle Mouret-Fourme, Antoine De Pauw, Matti Rookus, Thea M Mooij, Paul Pd Pharoah, Douglas F Easton, Antonis C Antoniou
BACKGROUND: BOADICEA (Breast and Ovarian Analysis of Disease Incidence and Carrier Estimation Algorithm) for breast cancer and the epithelial tubo-ovarian cancer (EOC) models included in the CanRisk tool (www.canrisk.org) provide future cancer risks based on pathogenic variants in cancer-susceptibility genes, polygenic risk scores, breast density, questionnaire-based risk factors and family history. Here, we extend the models to include the effects of pathogenic variants in recently established breast cancer and EOC susceptibility genes, up-to-date age-specific pathology distributions and continuous risk factors...
December 2022: Journal of Medical Genetics
https://read.qxmd.com/read/36116289/somatic-tumor-mutations-in-moderate-risk-cancer-genes-targets-for-germline-confirmatory-testing
#37
JOURNAL ARTICLE
Hannah Llorin, Madeline Graf, Nicolette Chun, James Ford
BACKGROUND: Recent changes in oncology practice guidelines indicate that mutations in cancer susceptibility genes identified on tumor genomic profiling (TGP) should prompt confirmatory germline testing. Our study aimed to determine the proportion of patients with TGP-identified mutations in moderate risk breast and ovarian cancer genes who previously would not have been considered for germline testing. METHODS: From January 2013 to September 2020, 7468 adult Stanford Health Care patients underwent TGP on solid tumor samples and 166 had TGP-identified mutations in moderate risk breast and ovarian cancer susceptibility genes (ATM, BRIP1, CHEK2, PALB2, RAD51C and RAD51D)...
September 6, 2022: Cancer Genetics
https://read.qxmd.com/read/35899665/-oncog%C3%A3-n%C3%A3-tique-dans-les-cancers-de-l-ovaire
#38
JOURNAL ARTICLE
Camille Desseignés, Patrick Benusiglio
GENETIC SUSCEPTIBILITY TO OVARIAN CANCERS About 15% of ovarian cancers are hereditary. Hereditary ovarian cancers are caused by a germline pathogenic variant in a susceptibility gene, mainly BRCA1 and BRCA2. Cumulative risks before age of 80 years are 44% and 17%, respectively, and are high enough to warrant risk-reducing salpingo-annexectomy in asymptomatic carriers before the menopause. Risk of breast cancer is also increased, with an associated recommendation of intensive breast screening with MRI at its core, and a possibility of risk-reducing mastectomy for well-informed patients who might request it...
June 2022: La Revue du Praticien
https://read.qxmd.com/read/35806485/functions-of-breast-cancer-predisposition-genes-implications-for-clinical-management
#39
REVIEW
Akiyo Yoshimura, Issei Imoto, Hiroji Iwata
Approximately 5-10% of all breast cancer (BC) cases are caused by germline pathogenic variants (GPVs) in various cancer predisposition genes (CPGs). The most common contributors to hereditary BC are BRCA1 and BRCA2 , which are associated with hereditary breast and ovarian cancer (HBOC). ATM , BARD1 , CHEK2 , PALB2 , RAD51C , and RAD51D have also been recognized as CPGs with a high to moderate risk of BC. Primary and secondary cancer prevention strategies have been established for HBOC patients; however, optimal preventive strategies for most hereditary BCs have not yet been established...
July 5, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/35783256/the-great-majority-of-homologous-recombination-repair-deficient-tumors-are-accounted-for-by-established-causes
#40
JOURNAL ARTICLE
Paula Štancl, Nancy Hamel, Keith M Sigel, William D Foulkes, Rosa Karlić, Paz Polak
Background: Gene-agnostic genomic biomarkers were recently developed to identify homologous recombination deficiency (HRD) tumors that are likely to respond to treatment with PARP inhibitors. Two machine-learning algorithms that predict HRD status, CHORD, and HRDetect, utilize various HRD-associated features extracted from whole-genome sequencing (WGS) data and show high sensitivity in detecting patients with BRCA1/2 bi-allelic inactivation in all cancer types. When using only DNA mutation data for the detection of potential causes of HRD, both HRDetect and CHORD find that 30-40% of cases that have been classified as HRD are due to unknown causes...
2022: Frontiers in Genetics
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