keyword
https://read.qxmd.com/read/38647622/ai-and-machine-learning-for-soil-analysis-an-assessment-of-sustainable-agricultural-practices
#21
REVIEW
Muhammad Awais, Syed Muhammad Zaigham Abbas Naqvi, Hao Zhang, Linze Li, Wei Zhang, Fuad A Awwad, Emad A A Ismail, M Ijaz Khan, Vijaya Raghavan, Jiandong Hu
Sustainable agricultural practices help to manage and use natural resources efficiently. Due to global climate and geospatial land design, soil texture, soil-water content (SWC), and other parameters vary greatly; thus, real time, robust, and accurate soil analytical measurements are difficult to be developed. Conventional statistical analysis tools take longer to analyze and interpret data, which may have delayed a crucial decision. Therefore, this review paper is presented to develop the researcher's insight toward robust, accurate, and quick soil analysis using artificial intelligence (AI), deep learning (DL), and machine learning (ML) platforms to attain robustness in SWC and soil texture analysis...
December 7, 2023: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647615/hyperthermophilic-pretreatment-composting-can-reduce-ammonia-emissions-by-controlling-proteolytic-bacterial-community-and-the-physicochemical-properties
#22
JOURNAL ARTICLE
Ying Huang, Yuehong Chen, Hongying Huang, Ghulam Mustafa Shah, Jiujun Lin, Meiling Yan, Chengbao Guo, Xu Xiao
Proteolysis is the rate-limiting step in the mineralization of organic nitrogen into ammonium (NH4 + ) and thereby the ammonia (NH3 ) released during the composting. However, the dynamics of bacterial proteolytic communities related to NH3 emissions during the composting systems are mostly unknown. This study aimed to examine and compare the effects of hyperthermophilic pretreatment composting (HPC) and traditional composting (TC) methods on (i) the difference of NH3 loss and nitrogenous compounds; (ii) the dynamics of the proteolytic bacterial community involved in the proteolysis and (iii) the correlation between the proteolytic bacterial community, biophysiochemical characteristics and NH3 loss...
July 8, 2023: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647603/epidural-angioleiomyoma-an-extraordinary-cause-of-compressive-myelopathy-mri-findings-with-histopathological-correlation
#23
JOURNAL ARTICLE
Carlos Jiménez Mascuñán, Alberto Martínez Martínez, Rosa Ríos Pelegrina, Antonio Jesús Láinez Ramos-Bossini
BACKGROUND: Angioleiomyomas are benign mesenchymal tumors usually located in the limbs, with anecdotal reports in the spine. We present an atypical case of an epidural spine angioleiomyoma presenting with compressive myelopathy symptoms. The diagnosis was suggested based on MRI findings, and subsequently confirmed histopathologically. RESULTS: This is the first known occurrence of pure spinal epidural angioleiomyoma as a source of compressive myelopathy. The imaging presentation, especially the 'dark reticular sign' on MRI, was crucial in suggesting the diagnosis despite the atypical location CONCLUSION: This report serves to raise awareness among clinicians and radiologists about including angioleiomyoma in differential diagnoses for spinal epidural lesions with indicative MRI features...
April 22, 2024: European Spine Journal
https://read.qxmd.com/read/38647595/optimization-of-clostridium-beijerinckii-semi-solid-fermentation-of-rape-straw-to-produce-butyric-acid-by-genome-analysis
#24
JOURNAL ARTICLE
Hui Kou, Jia Zheng, Guangbin Ye, Zongwei Qiao, Kaizheng Zhang, Huibo Luo, Wei Zou
Butyric acid is a volatile saturated monocarboxylic acid, which is widely used in the chemical, food, pharmaceutical, energy, and animal feed industries. This study focuses on producing butyric acid from pre-treated rape straw using simultaneous enzymatic hydrolysis semi-solid fermentation (SEHSF). Clostridium beijerinckii BRM001 screened from pit mud of Chinese nongxiangxing baijiu was used. The genome of C. beijerinckii BRM001 was sequenced and annotated. Using rape straw as the sole carbon source, fermentation optimization was carried out based on the genomic analysis of BRM001...
February 14, 2024: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647585/aphid-induced-volatiles-and-subsequent-attraction-of-natural-enemies-varies-among-sorghum-cultivars
#25
JOURNAL ARTICLE
Emily M Russavage, Jeremy A Hewlett, John M Grunseich, Adrianna Szczepaniec, William L Rooney, Anjel M Helms, Micky D Eubanks
The production of herbivore-induced plant volatiles (HIPVs) is a type of indirect defense used by plants to attract natural enemies and reduce herbivory by insect pests. In many crops little is known about genotypic variation in HIPV production or how this may affect natural enemy attraction. In this study, we identified and quantified HIPVs produced by 10 sorghum (Sorghum bicolor) cultivars infested with a prominent aphid pest, the sorghum aphid (Melanaphis sorghi Theobald). Volatiles were collected using dynamic headspace sampling techniques and identified and quantified using GC-MS...
April 22, 2024: Journal of Chemical Ecology
https://read.qxmd.com/read/38647550/suppression-of-type-i-interferon-signaling-in-myeloid-cells-by-autoantibodies-in-severe-covid-19-patients
#26
JOURNAL ARTICLE
Ami Aoki, Chiaki Iwamura, Masahiro Kiuchi, Kaori Tsuji, Atsushi Sasaki, Takahisa Hishiya, Rui Hirasawa, Kota Kokubo, Sachiko Kuriyama, Atsushi Onodera, Tadanaga Shimada, Tetsutaro Nagaoka, Satoru Ishikawa, Akira Kojima, Haruki Mito, Ryota Hase, Yasunori Kasahara, Naohide Kuriyama, Sukeyuki Nakamura, Takashi Urushibara, Satoru Kaneda, Seiichiro Sakao, Osamu Nishida, Kazuhisa Takahashi, Motoko Y Kimura, Shinichiro Motohashi, Hidetoshi Igari, Yuzuru Ikehara, Hiroshi Nakajima, Takuji Suzuki, Hideki Hanaoka, Taka-Aki Nakada, Toshiaki Kikuchi, Toshinori Nakayama, Koutaro Yokote, Kiyoshi Hirahara
PURPOSE: Auto-antibodies (auto-abs) to type I interferons (IFNs) have been identified in patients with life-threatening coronavirus disease 2019 (COVID-19), suggesting that the presence of auto-abs may be a risk factor for disease severity. We therefore investigated the mechanism underlying COVID-19 exacerbation induced by auto-abs to type I IFNs. METHODS: We evaluated plasma from 123 patients with COVID-19 to measure auto-abs to type I IFNs. We performed single-cell RNA sequencing (scRNA-seq) of peripheral blood mononuclear cells from the patients with auto-abs and conducted epitope mapping of the auto-abs...
April 22, 2024: Journal of Clinical Immunology
https://read.qxmd.com/read/38647511/treatment-of-noninfectious-uveitic-macular-edema-with-periocular-and-intraocular-corticosteroid-therapies-a-report-by-the-american-academy-of-ophthalmology
#27
JOURNAL ARTICLE
Justine R Smith, Jennifer E Thorne, Christina J Flaxel, Nieraj Jain, Stephen J Kim, Maureen G Maguire, Shriji Patel, Christina Y Weng, Steven Yeh, Leo A Kim
PURPOSE: To review the evidence on the effectiveness and complications of periocular and intraocular corticosteroid therapies for noninfectious uveitic macular edema. METHODS: A literature search of the PubMed database was conducted last in December 2021 and a post-assessment search was conducted in March 2023. The searches were limited to articles published in English and no date restrictions were imposed. The combined searches yielded 739 citations; 53 articles were selected for inclusion because the studies (1) evaluated periocular corticosteroid injection, intraocular corticosteroid injection or implant, suprachoroidal corticosteroid injection, or a combination thereof for uveitic macular edema; (2) had outcomes that included visual acuity (VA) or macular edema assessed clinically or imaged by OCT or fluorescein angiography; and (3) included more than 20 patients...
April 20, 2024: Ophthalmology
https://read.qxmd.com/read/38647451/factors-associated-with-pain-intensity-and-analgesic-use-during-inpatient-rehabilitation-for-hip-fracture
#28
JOURNAL ARTICLE
Erin Y Harmon, Li Shen Chong, Morgan D Marruso
PURPOSE: Effective pain management is vital for hip fracture recovery, yet the factors influencing pain reporting and pain medication use during inpatient rehabilitation for hip fractures are not well understood. This observational study aimed to (a) determine how cognitive abilities, expressive and receptive language abilities, and age are related to average daily pain intensity and analgesic use and (b) how average daily pain intensity and analgesic use are related to length of stay and functional outcomes in rehabilitation...
April 22, 2024: Rehabilitation Psychology
https://read.qxmd.com/read/38647437/pharmaceutical-proteins-at-the-interfaces-and-the-role-of-albumin
#29
REVIEW
Ketki Y Velankar, Ellen S Gawalt, Yi Wen, Wilson S Meng
A critical measure of the quality of pharmaceutical proteins is the preservation of native conformations of the active pharmaceutical ingredients. Denaturation of the active proteins in any step before administration into patients could lead to loss of potency and/or aggregation, which is associated with an increased risk of immunogenicity of the products. Interfacial stress enhances protein instability as their adsorption to the air-liquid and liquid-solid interfaces are implicated in the formation of denatured proteins and aggregates...
April 22, 2024: Biotechnology Progress
https://read.qxmd.com/read/38647415/viewing-early-life-without-labels-optical-approaches-for-imaging-the-early-embryo
#30
JOURNAL ARTICLE
Darren J X Chow, Tiffany C Y Tan, Avinash Upadhya, Megan Lim, Kishan Dholakia, Kylie R Dunning
Embryo quality is an important determinant of successful implantation and a resultant live birth. Current clinical approaches for evaluating embryo quality rely on subjective morphology assessments or an invasive biopsy for genetic testing. However, both approaches can be inherently inaccurate and crucially, fail to improve the live birth rate following the transfer of in vitro produced embryos. Optical imaging offers a potential non-invasive and accurate avenue for assessing embryo viability. Recent advances in various label-free optical imaging approaches have garnered increased interest in the field of reproductive biology due to their ability to rapidly capture images at high-resolution, delivering both morphological and molecular information...
April 22, 2024: Biology of Reproduction
https://read.qxmd.com/read/38647375/y-chromosome-loss-and-implications-for-oncology
#31
JOURNAL ARTICLE
Canan D Dirican, Peter S Nelson
The Y chromosome has recognized functions in promoting male sex determination and regulating aspects of fertility. However, recent work has demonstrated important roles for the Y chromosome and Y-encoded genes in multiple domains of male health, including cancer. It is well-established that males experience shorter life spans than females, and this sex bias on overall mortality is ac-centuated in populations with longer life expectancy, in part related to elevated rates of cancer. The majority of human malignancies exhibit a sex bias with elevated frequencies in males...
April 22, 2024: Molecular Cancer Research: MCR
https://read.qxmd.com/read/38647341/-respiration-and-growth-of-paracoccus-denitrificans-r-1-with-nitrous-oxide-as-an-electron-acceptor
#32
JOURNAL ARTICLE
Jiaxian Zhou, Wenfang Deng, Jiapeng Wu, Hua Xiang, Xiaomei Shen, Jih-Gaw Lin, Yiguo Hong
UNLABELLED: In the nitrogen biogeochemical cycle, the reduction of nitrous oxide (N2 O) to N2 by N2 O reductase, which is encoded by nosZ gene, is the only biological pathway for N2 O consumption. In this study, we successfully isolated a strain of denitrifying Paracoccus denitrificans R-1 from sewage treatment plant sludge. This strain has strong N2 O reduction capability, and the average N2 O reduction rate was 5.10 ± 0.11 × 10-9 µmol·h-1 ·cell-1 under anaerobic condition in a defined medium...
April 22, 2024: Microbiology Spectrum
https://read.qxmd.com/read/38647324/from-field-induced-to-zero-field-smms-associated-with-open-closed-structures-of-bis-zndy-tetranuclear-complexes-a-combined-magnetic-theoretical-and-optical-study
#33
JOURNAL ARTICLE
Andoni Zabala-Lekuona, Xabier Lopez de Pariza, Ismael F Díaz-Ortega, Javier Cepeda, Hiroyuki Nojiri, Nina P Gritsan, Alexey A Dmitriev, Alberto López-Ortega, Antonio Rodríguez-Diéguez, José M Seco, Enrique Colacio
We have prepared a bis(compartmental) Mannich base ligand H4 L (1,4,8,11-tetraaza-1,4,8,11-tetrakis(2-hydroxy-3-methoxy-5-methylbenzyl)cyclotetradecane) specifically designed to obtain bis(TMII LnIII ) tetranuclear complexes (TM = transition metal). In this regard, we have succeeded in obtaining three new complexes of the formula [Zn2 (μ-L)(μ-OAc)Dy2 (NO3 )2 ]·[Zn2 (μ-L)(μ-OAc)Dy2 (NO3 )(OAc)]·4CHCl3 ·2MeOH (1) and [TM2 (μ-H2 L)2 (μ-succinate)Ln2 (NO3 )2 ] (NO3 )2 ·2H2 O·6MeOH (TMII = Zn, LnIII = Dy (2); TMII = Co, LnIII = Dy (3))...
April 22, 2024: Dalton Transactions: An International Journal of Inorganic Chemistry
https://read.qxmd.com/read/38647306/surface-tension-of-aqueous-electrolyte-solutions-a-thermomechanical-approach
#34
JOURNAL ARTICLE
Yury A Budkov, Nikolai N Kalikin, Petr E Brandyshev
We determine the surface tension of aqueous electrolyte solutions in contact with non-polar dielectric media using a thermomechanical approach, which involves deriving the stress tensor from the thermodynamic potential of an inhomogeneous fluid. To obtain the surface tension, we calculate both the normal and tangential pressures using the components of the stress tensor, recently derived by us [Y. A. Budkov and P. E. Brandyshev, J. Chem. Phys. 159, 174103 (2023)] within the framework of Wang's variational field theory...
April 28, 2024: Journal of Chemical Physics
https://read.qxmd.com/read/38647111/neuropathogenic-role-of-astrocyte-derived-extracellular-vesicles-in-hiv-associated-neurocognitive-disorders
#35
JOURNAL ARTICLE
Divya T Chemparathy, Sudipta Ray, Chase Ochs, Natasha Ferguson, Dinesh Y Gawande, Shashank M Dravid, Shannon Callen, Susmita Sil, Shilpa Buch
Our previous findings demonstrated that astrocytic HIF-1α plays a major role in HIV-1 Tat-mediated amyloidosis which can lead to Alzheimer's-like pathology-a comorbidity of HIV-Associated Neurocognitive Disorders (HAND). These amyloids can be shuttled in extracellular vesicles, and we sought to assess whether HIV-1 Tat stimulated astrocyte-derived EVs (ADEVs) containing the toxic amyloids could result in neuronal injury in vitro and in vivo. We thus hypothesized that blocking HIF-1α could likely mitigate HIV-1 Tat-ADEV-mediated neuronal injury...
April 2024: Journal of Extracellular Vesicles
https://read.qxmd.com/read/38647082/massively-parallel-identification-of-sequence-motifs-triggering-ribosome-associated-mrna-quality-control
#36
JOURNAL ARTICLE
Katharine Y Chen, Heungwon Park, Arvind Rasi Subramaniam
Decay of mRNAs can be triggered by ribosome slowdown at stretches of rare codons or positively charged amino acids. However, the full diversity of sequences that trigger co-translational mRNA decay is poorly understood. To comprehensively identify sequence motifs that trigger mRNA decay, we use a massively parallel reporter assay to measure the effect of all possible combinations of codon pairs on mRNA levels in S. cerevisiae. In addition to known mRNA-destabilizing sequences, we identify several dipeptide repeats whose translation reduces mRNA levels...
April 22, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38647079/race-insurance-and-socioeconomic-influences-on-outcomes-following-roux-en-y-gastric-bypass
#37
JOURNAL ARTICLE
Oluwasegun A Akinyemi, Terhas A Weldeslase, Tsion F Andine, Mojisola Fasokun, Yasmine Griffiths, Eunice Odusanya, Mallory Williams, Kakra Hughes, Edward Cornwell, Terrence Fullum
The effectiveness of Roux-en-Y gastric bypass (RYGB) might be shadowed by disparities in outcomes related to patient race and insurance type. We determine the influence of patient race/ethnicity and insurance types on complications following RYGB. We performed a retrospective analysis using data sourced from the National Inpatient Sample Database (2010 to 2019). A multivariate analysis was employed to determine the relationship between patient race/ethnicity and insurance type on RYGB complications. The analysis determined the interaction between race/ethnicity and insurance type on RYGB outcomes...
April 22, 2024: American Surgeon
https://read.qxmd.com/read/38647045/live-cell-imaging-reveals-the-trade-off-between-target-search-flexibility-and-efficiency-for-cas9-and-cas12a
#38
JOURNAL ARTICLE
Lorenzo Olivi, Cleo Bagchus, Victor Pool, Ezra Bekkering, Konstantin Speckner, Hidde Offerhaus, Wen Y Wu, Martin Depken, Koen J A Martens, Raymond H J Staals, Johannes Hohlbein
CRISPR-Cas systems have widely been adopted as genome editing tools, with two frequently employed Cas nucleases being SpyCas9 and LbCas12a. Although both nucleases use RNA guides to find and cleave target DNA sites, the two enzymes differ in terms of protospacer-adjacent motif (PAM) requirements, guide architecture and cleavage mechanism. In the last years, rational engineering led to the creation of PAM-relaxed variants SpRYCas9 and impLbCas12a to broaden the targetable DNA space. By employing their catalytically inactive variants (dCas9/dCas12a), we quantified how the protein-specific characteristics impact the target search process...
April 22, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38646978/retrocarotid-dissection-technique-compared-to-the-caudocranial-approach-for-the-surgical-treatment-of-carotid-body-tumors-a-15-year-experience
#39
JOURNAL ARTICLE
Luis O Bobadilla-Rosado, Javier E Anaya-Ayala, Eros Santos-Chavez, Santiago Mier Y Teran-Ellis, Aliberth Bonilla-Salas, Kenia Rivas-Redonda, Xandra Gomez-Serafin, Hugo Laparra-Escareno, Nina Mendez-Dominguez, Carlos A Hinojosa
INTRODUCTION: Carotid body tumors are rare neoplasms with malignant potential. We aim to follow up on our initial experience published in 2015 and compare the occurrence of complications and postoperative outcomes with the use of retrocarotid dissection (RCD) against the standard caudocranial (SCCD) technique. METHODS: This was an observational, case-control study in which we analyzed all of the carotid body tumor resections performed from 1986 to 2022. Parametric and nonparametric tests were used accordingly...
April 22, 2024: Vascular Medicine
https://read.qxmd.com/read/38646948/the-effectiveness-of-a-positive-psychological-intervention-for-promoting-preschool-teachers-well-being-and-professional-competence-easp-intervention-program
#40
JOURNAL ARTICLE
Alfred S Y Lee, Wing Kai Fung, Derwin K C Chan, Kevin Kien Hoa Chung
The present study investigated the effectiveness of the Early Advancement in Social-Emotional Health and Positivity (EASP) program, a positive psychological intervention promoting preschool teachers' well-being and the motivational aspect of professional competence. Participants were 273 in-service preschool teachers (Mage  = 34.56 years, SD = 9.52, range = 22-58; female = 98.90%) who participated in a 2-month randomized controlled trial. Participants were randomly assigned to the intervention group (n = 143) receiving 1) four online workshops, 2) a smartphone app, and 3) an online activity, or to the wait-list control group (n = 130), which received the intervention materials after all the data collection...
April 22, 2024: Applied Psychology. Health and Well-being
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