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https://www.readbyqxmd.com/read/28434198/eukaryotic-diversity-in-late-pleistocene-marine-sediments-around-a-shallow-methane-hydrate-deposit-in-the-japan-sea
#1
M Kouduka, A S Tanabe, S Yamamoto, K Yanagawa, Y Nakamura, F Akiba, H Tomaru, H Toju, Y Suzuki
Marine sediments contain eukaryotic DNA deposited from overlying water columns. However, a large proportion of deposited eukaryotic DNA is aerobically biodegraded in shallow marine sediments. Cold seep sediments are often anaerobic near the sediment-water interface, so eukaryotic DNA in such sediments is expected to be preserved. We investigated deeply buried marine sediments in the Japan Sea, where a methane hydrate deposit is associated with cold seeps. Quantitative PCR analysis revealed the reproducible recovery of eukaryotic DNA in marine sediments at depths up to 31...
April 23, 2017: Geobiology
https://www.readbyqxmd.com/read/28434178/massilia-chloroacetimidivorans-sp-nov-a-chloroacetamide-herbicide-degrading-bacterium-isolated-from-soil
#2
Hyosun Lee, Dong-Uk Kim, Sooyeon Park, Jung-Hoon Yoon, Jong-Ok Ka
A Gram-stain negative, rod-shaped, aerobic bacterial strain, designated TA-C7e(T), was isolated from an agricultural soil obtained from Taean region, Korea. Phylogenetically, the strain was grouped with the genus Massilia and shared 95.33-97.97% 16S rRNA sequence similarity with the type strains of other species of the genus Massilia. The DNA-DNA hybridisation between TA-C7e(T) and Massilia haematophila KACC 13771(T), Massilia suwonesis KACC 12635(T), and Massilia yuzhufengensis KACC 16569(T) revealed a low level of relatedness (<40%)...
April 22, 2017: Antonie Van Leeuwenhoek
https://www.readbyqxmd.com/read/28433920/proteomic-analysis-of-sockeye-salmon-serum-as-a-tool-for-biomarker-discovery-and-new-insight-into-the-sublethal-toxicity-of-diluted-bitumen
#3
Sarah L Alderman, Laura A Dindia, Christopher J Kennedy, Anthony P Farrell, Todd E Gillis
Pipelines carrying diluted bitumen (dilbit) from Canada's oil sands traverse North America, including the freshwater habitat of Pacific salmon, posing a risk of environmental release and aquatic exposure. Swimming performance is impacted in juvenile sockeye (Oncorhynchus nerka) exposed to dilbit; therefore biomarkers of dilbit exposure will be valuable for monitoring at-risk salmon stocks. This study characterized changes in the serum proteome of sockeye exposed to a sub-lethal and environmentally relevant concentration of dilbit using isobaric tags for relative and absolute quantitation (iTRAQ), and included a range of experimental conditions to permit identification of biomarkers that are robust across time (1 and 4wk) and exercise level (at rest and following a swim test)...
April 12, 2017: Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics
https://www.readbyqxmd.com/read/28433918/chronic-responses-of-aerobic-granules-to-zinc-oxide-nanoparticles-in-a-sequencing-batch-reactor-performing-simultaneous-nitrification-denitrification-and-phosphorus-removal
#4
Qiulai He, Shuxian Gao, Shilu Zhang, Wei Zhang, Hongyu Wang
The reactor performance, granules characteristics and microbial population dynamics were investigated to assess the chronic responses of aerobic granules to zinc oxide nanoparticles (ZnO NPs) of 0, 5, 10 and 20mg/L for a period of 180days. The results showed that ZnO NPs stimulated COD removal, whereas caused inhibition to both nitrification and denitrification. However, biological phosphorus removal remained effective and stable. Introduction of ZnO NPs sharply decreased the respiration of granules, while did not change the settleability...
April 7, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28433913/simultaneous-partial-nitrification-and-2-fluorophenol-biodegradation-with-aerobic-granular-biomass-reactor-performance-and-microbial-communities
#5
Carlos Ramos, Catarina L Amorim, Daniela P Mesquita, Eugénio C Ferreira, Julián Carrera, Paula M L Castro
An aerobic granular bioreactor was operated for over 4months, treating a synthetic wastewater with a high ammonium content (100mgNL(-1)). The inoculum was collected from a bioreactor performing simultaneous partial nitrification and aromatic compounds biodegradation. From day-56 onwards, 2-fluorophenol (2-FP) (12.4mgL(-1)) was added to the feeding wastewater and the system was bioaugmented with a 2-FP degrading bacteria (Rhodococcus sp. FP1). By the end of operation, complete 2-FP biodegradation and partial nitrification were simultaneously achieved...
March 30, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28433898/performance-and-microbial-population-dynamics-during-stable-operation-and-reactivation-after-extended-idle-conditions-in-an-aerobic-granular-sequencing-batch-reactor
#6
Qiulai He, Wei Zhang, Shilu Zhang, Zhuocheng Zou, Hongyu Wang
The evolution of removal performance and bacterial population dynamics of an aerobic granular sequencing batch reactor were investigated during stable operation and reactivation after prolonged storage. The system was run for a period of 130days including the stable condition phase, storage period and the subsequent reactivation process. Excellent removal performance was obtained during the stable operation period, which was decayed by the extended idle conditions. The removal efficiencies for both carbon and nitrogen decayed while phosphorus removal remained unaffected...
April 1, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28433879/sulfamethoxazole-degradation-in-anaerobic-sulfate-reducing-bacteria-sludge-system
#7
Yanyan Jia, Samir Kumar Khanal, Huiqun Zhang, Guang-Hao Chen, Hui Lu
Sulfamethoxazole (SMX) is one of the most commonly used antibiotics. SMX degradation in sulfate-reducing bacteria (SRB) sludge systems has not been reported so far. This research investigated the SMX degradation using SRB sludge in a sulfate-reducing up-flow sludge bed reactor. Moreover, the mechanisms and kinetics of SMX removal were also investigated using SRB sludge via a series of batch experiments. The results showed that SMX removal was characterized by a rapid sorption onto SRB sludge, and desorption from SRB sludge to aqueous phase until achieving equilibrium, and then followed by slow biodegradation...
April 17, 2017: Water Research
https://www.readbyqxmd.com/read/28432953/new-and-practical-mathematical-model-of-membrane-fouling-in-an-aerobic-submerged-membrane-bioreactor
#8
Mst Fazana Rahman Zuthi, Wenshan Guo, Huu Hao Ngo, Duc Long Nghiem, Faisal I Hai, Siqing Xia, Jianxin Li, Jixiang Li, Yi Liu
This study aimed to develop a practical semi-empirical mathematical model of membrane fouling that accounts for cake formation on the membrane and its pore blocking as the major processes of membrane fouling. In the developed model, the concentration of mixed liquor suspended solid is used as a lumped parameter to describe the formation of cake layer including the biofilm. The new model considers the combined effect of aeration and backwash on the foulants' detachment from the membrane. New exponential coefficients are also included in the model to describe the exponential increase of transmembrane pressure that typically occurs after the initial stage of an MBR operation...
April 4, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28432952/removal-of-antibiotics-from-piggery-wastewater-by-biological-aerated-filter-system-treatment-efficiency-and-biodegradation-kinetics
#9
Jun Chen, You-Sheng Liu, Jin-Na Zhang, Yong-Qiang Yang, Li-Xin Hu, Yuan-Yuan Yang, Jian-Liang Zhao, Fan-Rong Chen, Guang-Guo Ying
This study aimed to investigate the removal efficiency and mechanism for antibiotics in swine wastewater by a biological aerated filter system (BAF system) in combination with laboratory aerobic and anaerobic incubation experiments. Nine antibiotics including sulfamonomethoxine, sulfachloropyridazine, sulfamethazine, trimethoprim, norfloxacin, ofloxacin, lincomycin, leucomycin and oxytetracycline were detected in the wastewater with concentrations up to 192,000ng/L. The results from this pilot study showed efficient removals (>82%) of the conventional wastewater pollutants (BOD5, COD, TN and NH3-N) and the detected nine antibiotics by the BAF system...
April 9, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28432951/microbial-communities-in-the-functional-areas-of-a-biofilm-reactor-with-anaerobic-aerobic-process-for-oily-wastewater-treatment
#10
Jianhua Li, Shanshan Sun, Ping Yan, Li Fang, Yang Yu, Yangdong Xiang, Di Wang, Yejing Gong, Yanjun Gong, Zhongzhi Zhang
Microbial communities in the functional areas of biofilm reactors with large height-diameter ratio using the anaerobic-aerobic (A/O) reflux process was investigated to treat heavy oil refinery wastewater without pretreatment. In the process, chemical oxygen demand (COD) and total nitrogen (TN) removal reached 93.2% and 82.8%, and the anaerobic biofilm reactor was responsible for 95% and 99%, respectively. Areas for hydrolysis acidification and acetic acid production, methane production, and COD recovery were obvious in the anaerobic reactor...
April 10, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28432856/the-effectiveness-of-exercise-in-adults-with-systemic-lupus-erythematosus-a-systematic-review-and-meta-analysis-to-guide-evidence-based-practice
#11
Mei-Ling Wu, Kuang-Hui Yu, Jen-Chen Tsai
BACKGROUND: Fatigue is the most common and unpleasant symptom of patients with systemic lupus erythematosus (SLE). However, there is limited information regarding how exercise affects fatigue. AIMS: The purpose of this study is to review and synthesize the current knowledge concerning the effectiveness of exercise training for treating fatigue among adults with SLE. The characteristics of beneficial exercise training are further evaluated. METHODS: We conducted a systematic review and meta-analysis...
April 22, 2017: Worldviews on Evidence-based Nursing
https://www.readbyqxmd.com/read/28432623/performance-of-cstr-egsb-sbr-system-for-treating-sulfate-rich-cellulosic-ethanol-wastewater-and-microbial-community-analysis
#12
Lili Shan, Zhaohan Zhang, Yanling Yu, John Justo Ambuchi, Yujie Feng
Performance and microbial community composition were evaluated in a two-phase anaerobic and aerobic system treating sulfate-rich cellulosic ethanol wastewater (CEW). The system was operated at five different chemical oxygen demand (COD)/SO4(2-) ratios (63.8, 26.3, 17.8, 13.7, and 10.7). Stable performance was obtained for total COD removal efficiency (94.5%), sulfate removal (89.3%), and methane production rate (11.5 L/day) at an organic loading rate of 32.4 kg COD/(m(3)·day). The acidogenic reactor made a positive contribution to net VFAs production (2318...
April 21, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28432077/aerobic-exercise-promotes-executive-functions-and-impacts-functional-neural-activity-among-older-adults-with-vascular-cognitive-impairment
#13
Chun Liang Hsu, John R Best, Jennifer C Davis, Lindsay S Nagamatsu, Shirley Wang, Lara A Boyd, Gy Robin Hsiung, Michelle W Voss, Janice Jennifer Eng, Teresa Liu-Ambrose
BACKGROUND: Vascular cognitive impairment (VCI) results from cerebrovascular disease, and worldwide, it is the second most common type of cognitive dysfunction. While targeted aerobic training is a promising approach to delay the progression of VCI by reducing cardiometabolic risk factors, few randomised controlled trials to date have specifically assessed the efficacy of aerobic training on cognitive and brain outcomes in this group at risk for functional decline. AIM: To examine the effect of moderate-intensity aerobic training on executive functions and functional neural activity among older adults with mild subcortical ischaemic VCI (SIVCI)...
April 21, 2017: British Journal of Sports Medicine
https://www.readbyqxmd.com/read/28431849/prospective-cluster-controlled-crossover-trial-to-compare-the-impact-of-an-improved-hydrogen-peroxide-disinfectant-and-a-quaternary-ammonium-based-disinfectant-on-surface-contamination-and-health-care-outcomes
#14
John M Boyce, Kerri A Guercia, Linda Sullivan, Nancy L Havill, Renee Fekieta, Janet Kozakiewicz, David Goffman
BACKGROUND: Quaternary ammonium-based (Quat) disinfectants are widely used, but they have disadvantages. METHODS: This was a 12-month prospective cluster controlled crossover trial. On 4 wards, housekeepers performed daily cleaning using a disinfectant containing either 0.5% improved hydrogen peroxide (IHP) or Quat. Each month, 5-8 high-touch surfaces in several patient rooms on each ward were tagged with a fluorescent marker and cultured before and after cleaning...
April 18, 2017: American Journal of Infection Control
https://www.readbyqxmd.com/read/28431525/membrane-enriched-proteome-changes-and-prion-protein-expression-during-neural-differentiation-and-in-neuroblastoma-cells
#15
J A Macedo, D Schrama, I Duarte, E Tavares, J Renaut, M E Futschik, P M Rodrigues, E P Melo
BACKGROUND: The function of the prion protein, involved in the so-called prion diseases, remains a subject of intense debate and the possibility that it works as a pleiotropic protein through the interaction with multiple membrane proteins is somehow supported by recent reports. Therefore, the use of proteomic and bioinformatics combined to uncover cellular processes occurring together with changes in the expression of the prion protein may provide further insight into the putative pleiotropic role of the prion protein...
April 22, 2017: BMC Genomics
https://www.readbyqxmd.com/read/28431408/the-effects-of-exercise-modality-during-additional-high-intensity-interval-training-upon-aerobic-fitness-and-strength-in-powerlifting-and-strongman-athletes
#16
Patroklos Androulakis-Korakakis, Louis Langdown, Adam Lewis, James Fisher, Paulo Gentil, Antonio Paoli, James Steele
Powerlifters and strongman athletes have a necessity for optimal levels of muscular strength whilst maintaining sufficient aerobic capacity to perform and recover between events. HIIT has been popularized for its efficacy in improving both aerobic fitness and strength but never assessed within the aforementioned population group. The present study looked to compare the effect of exercise modality, e.g. a traditional aerobic mode (AM), and strength mode, (SM), during HIIT upon aerobic fitness and strength. Sixteen well resistance trained male participants, currently competing in powerlifting and strongman events, completed 8 weeks of approximately effort- and volume-matched HIIT in 2 groups: AM (cycling, n=8) and SM (resistance training, n=8)...
April 21, 2017: Journal of Strength and Conditioning Research
https://www.readbyqxmd.com/read/28431199/staphylococcus-aureus-nitric-oxide-synthase-sanos-modulates-aerobic-respiratory-metabolism-and-cell-physiology
#17
Austin B Mogen, Ronan K Carroll, Kimberly L James, Genevy Lima, Dona Silva, Jeffrey A Culver, Christopher Petucci, Lindsey N Shaw, Kelly C Rice
Nitric oxide (NO) is generated from arginine and oxygen via NO synthase (NOS). Staphylococcus aureus NOS (saNOS) has previously been shown to affect virulence and resistance to exogenous oxidative stress, yet the exact mechanism is unknown. Herein, we report a previously-undescribed role of saNOS in S. aureus aerobic physiology. Specifically, aerobic S. aureus nos mutant cultures presented with elevated endogenous reactive oxygen species (ROS) and superoxide levels, as well as increased membrane potential, increased respiratory dehydrogenase activity, and slightly elevated oxygen consumption...
April 21, 2017: Molecular Microbiology
https://www.readbyqxmd.com/read/28431045/water-table-drawdown-shapes-the-depth-dependent-variations-in-prokaryotic-diversity-and-structure-in-zoige-peatlands
#18
Qiuping Zhong, Huai Chen, Liangfeng Liu, Yixin He, Dan Zhu, Lin Jiang, Wei Zhan, Ji Hu
Microbial communities are important to ecosystem function and sensitive to hydrological dynamics. However, we lack predictable knowledge about how soil microorganisms respond to water table drawdown in different depths. This research used high-throughput sequencing method to determine the responses of prokaryotic communities to the changes of water table and depth on Zoige peatlands. Our results showed that water table drawdown reduced alpha diversity indices (observed species, Shannon diversity and Chao1 richness) of prokaryotic communities...
April 18, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28430950/effects-of-dissolved-oxygen-concentration-and-iron-addition-on-immediate-early-gene-expression-of-magnetospirillum-gryphiswaldense-msr-1
#19
Shiwen Zhuang, Diana Chinyere Anyaogu, Takeshi Kasama, Mhairi Workman, Uffe Hasbro Mortensen, Timothy John Hobley
We report effects of dissolved oxygen (DO) concentration and iron addition on gene expression of Magnetospirillum gryphiswaldense MSR-1 cells during fermentations, focusing on 0.25-24 h after iron addition. The DO was strictly controlled at 0.5% or 5% O2, and compared with aerobic condition. Uptake of iron (and formation of magnetosomes) was only observed in the 0.5% O2 condition where there was little difference in cell growth and carbon consumption compared to the 5% O2 condition. Quantitative reverse transcription PCR analysis showed a rapid (within 0...
April 19, 2017: FEMS Microbiology Letters
https://www.readbyqxmd.com/read/28429326/wax-ester-fermentation-and-its-application-for-biofuel-production
#20
Hiroshi Inui, Takahiro Ishikawa, Masahiro Tamoi
In Euglena cells under anaerobic conditions, paramylon, the storage polysaccharide, is promptly degraded and converted to wax esters. The wax esters synthesized are composed of saturated fatty acids and alcohols with chain lengths of 10-18, and the major constituents are myristic acid and myristyl alcohol. Since the anaerobic cells gain ATP through the conversion of paramylon to wax esters, the phenomenon is named "wax ester fermentation". The wax ester fermentation is quite unique in that the end products, i...
2017: Advances in Experimental Medicine and Biology
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