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D-amino acid oxidase

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https://www.readbyqxmd.com/read/29766197/selenoprotein-w-as-a-molecular-target-of-d-amino-acid-oxidase-is-regulated-by-d-amino-acid-in-chicken-neurons
#1
Wei Li, Milton Talukder, Xue-Tong Sun, Cong Zhang, Xue-Nan Li, Jing Ge, Jin-Long Li
Selenoprotein W (SelW) is an important member of the avian selenoprotein family. It is well known for its important role in protecting neurons from oxidative stress during neuronal development. d-Amino acid (d-serine), as a neurotransmitter in the central nervous system (CNS), can mediate neurotoxicity. d-Amino acid oxidase (DAAO) is responsible for regulating the d-serine levels in cells. However, the correlation between SelW and DAAO is not clear yet. To investigate the regulations between SelW and DAAO, chicken embryo monolayer neurons were treated with d-serine and/or Se...
May 16, 2018: Metallomics: Integrated Biometal Science
https://www.readbyqxmd.com/read/29745327/progress-in-one-pot-bioconversion-of-cephalosporin-c-to-7-aminocephalosporanic-acid
#2
Qiang Tan, Jie Qiu, Xiang Luo, Yewang Zhang, Yuting Liu, Yuquan Chen, Jing Yuan, Wei Liao
BACKGROUND: Cephalosporins are the most widely used semisynthetic antibiotics, which acted on bacterial cell wall (peptidoglycan) synthesis. The key intermediate for fabricating about two-thirds of cephalosporins in clinical use is 7-aminocephalosporanic acid (7-ACA), which derived from chemical or enzymatic deacylation of the natural antibiotic cephalosporin C (CPC). The chemical deacylation process has been replaced by the enzymatic deacylation process because the chemical process required harsh conditions and released toxic waste...
May 8, 2018: Current Pharmaceutical Biotechnology
https://www.readbyqxmd.com/read/29740415/d-serine-metabolism-and-its-importance-in-development-of-dictyostelium-discoideum
#3
Tomokazu Ito, Natsuki Hamauchi, Taisuke Hagi, Naoya Morohashi, Hisashi Hemmi, Yukie G Sato, Tamao Saito, Tohru Yoshimura
In mammals, D-Ser is synthesized by serine racemase (SR) and degraded by D-amino acid oxidase (DAO). D-Ser acts as an endogenous ligand for N -methyl-D-aspartate (NMDA)- and δ2 glutamate receptors, and is involved in brain functions such as learning and memory. Although SR homologs are highly conserved in eukaryotes, little is known about the significance of D-Ser in non-mammals. In contrast to mammals, the slime mold Dictyostelium discoideum genome encodes SR, DAO, and additionally D-Ser specific degradation enzyme D-Ser dehydratase (DSD), but not NMDA- and δ2 glutamate receptors...
2018: Frontiers in Microbiology
https://www.readbyqxmd.com/read/29729992/proteomics-functional-characterization-and-antivenom-neutralization-of-the-venom-of-pakistani-russell-s-viper-daboia-russelii-from-the-wild
#4
Tasnim Faisal, Kae Yi Tan, Si Mui Sim, Naeem Quraishi, Nget Hong Tan, Choo Hock Tan
The venom proteome of wild Pakistani Russell's viper (Daboia russelii) was investigated through nano-ESI-LCMS/MS of the reverse-phase HPLC fractions. A total of 54 venom proteins were identified and clustered into 11 protein families. Phospholipase A2 (PLA2 , 63.8%) and Kunitz-type serine protease inhibitor (KSPI, 16.0%) were most abundant, followed by snake venom serine protease (SVSP, 5.5%, mainly Factor V activating enzyme), vascular endothelial growth factor (VEGF, 4.3%), snake venom metalloprotease (SVMP, 2...
May 3, 2018: Journal of Proteomics
https://www.readbyqxmd.com/read/29729731/an-amperometric-glutamate-biosensor-for-monitoring-glutamate-release-from-brain-nerve-terminals-and-in-blood-plasma
#5
T Borisova, D Kucherenko, O Soldatkin, I Kucherenko, A Pastukhov, A Nazarova, M Galkin, A Borysov, N Krisanova, A Soldatkin, A El Skaya
An excess of the excitatory neurotransmitter, glutamate, in the synaptic cleft during hypoxia/ischemia provokes development of neurotoxicity and originates from the reversal of Na+ -dependent glutamate transporters located in the plasma membrane of presynaptic brain nerve terminals. Here, we have optimized an electrochemical glutamate biosensor using glutamate oxidase and developed a biosensor-based methodological approach for analysis of rates of tonic, exocytotic and transporter-mediated glutamate release from isolated rat brain nerve terminals (synaptosomes)...
August 31, 2018: Analytica Chimica Acta
https://www.readbyqxmd.com/read/29699925/discovery-of-d-amino-acid-oxidase-inhibitors-based-on-virtual-screening-against-the-lid-open-enzyme-conformation
#6
Bence Szilágyi, Žiga Skok, Anita Rácz, Rok Frlan, György G Ferenczy, Janez Ilaš, György M Keserű
d-Amino acid oxidase (DAAO) inhibitors are typically small polar compounds with often suboptimal pharmacokinetic properties. Features of the native binding site limit the operational freedom of further medicinal chemistry efforts. We therefore initiated a structure based virtual screening campaign based on the X-ray structures of DAAO complexes where larger ligands shifted the loop (lid opening) covering the native binding site. The virtual screening of our in-house collection followed by the in vitro test of the best ranked compounds led to the identification of a new scaffold with micromolar IC50 ...
April 20, 2018: Bioorganic & Medicinal Chemistry Letters
https://www.readbyqxmd.com/read/29648983/enhancement-of-brain-d-serine-mediates-recovery-of-cognitive-function-after-tbi
#7
Sigal Liraz-Zaltsman, Barbara Slusher, Dana Atrakchi-Baranes, Kinneret Rosenblatt, Yael Friedman Levi, Efrat Leah Kesner, Alcino J Silva, Anat Biegon, Esther Shohami
Cognitive deficits, especially memory loss, are common and devastating neuropsychiatric sequelae of traumatic brain injury (TBI). The deficits may persist for a long time and may be accompanied by increased risk of developing early onset dementia. Past attempts to reverse the neuropsychological effects of brain injury with glutamate-N-methyl-D-aspartate (NMDA) antagonists failed to show any benefits or worsened the outcome, suggesting activation, rather than blockage, of the NMDA receptor (NMDAR) may be useful in the sub-acute period after TBI and stroke...
March 14, 2018: Journal of Neurotrauma
https://www.readbyqxmd.com/read/29608200/the-first-transcriptomes-from-field-collected-individual-whiteflies-bemisia-tabaci-hemiptera-aleyrodidae-a-case-study-of-the-endosymbiont-composition
#8
Peter Sseruwagi, James Wainaina, Joseph Ndunguru, Robooni Tumuhimbise, Fred Tairo, Jian-Yang Guo, Alice Vrielink, Amanda Blythe, Tonny Kinene, Bruno De Marchi, Monica A Kehoe, Sandra Tanz, Laura M Boykin
Background: Bemisia tabaci species ( B. tabaci ), or whiteflies, are the world's most devastating insect pests. They cause billions of dollars (US) of damage each year, and are leaving farmers in the developing world food insecure. Currently, all publically available transcriptome data for B. tabaci are generated from pooled samples, which can lead to high heterozygosity and skewed representation of the genetic diversity. The ability to extract enough RNA from a single whitefly has remained elusive due to their small size and technological limitations...
March 8, 2018: Gates open research
https://www.readbyqxmd.com/read/29575798/structural-and-functional-characterisation-of-multi-copper-oxidase-cueo-from-lignin-degrading-bacterium-ochrobactrum-sp-reveal-its-activity-towards-lignin-model-compounds-and-lignosulfonate
#9
Rommel Santiago Granja-Travez, Rachael C Wilkinson, Gabriela Felix Persinoti, Fabio M Squina, Vilmos Fülöp, Timothy D H Bugg
The identification of enzymes responsible for oxidation of lignin in lignin-degrading bacteria is of interest for biotechnological valorization of lignin to renewable chemical products. The genome sequences of two lignin-degrading bacteria, Ochrobactrum sp., and Paenibacillus sp., contain no B-type DyP peroxidases implicated in lignin degradation in other bacteria, but contain putative multi-copper oxidase genes. Multi-copper oxidase CueO from Ochrobactrum sp. was expressed and reconstituted as a recombinant laccase-like enzyme, and kinetically characterized...
March 25, 2018: FEBS Journal
https://www.readbyqxmd.com/read/29567365/enzyme-assay-for-d-amino-acid-oxidase-using-optically-gated-capillary-electrophoresis-laser-induced-fluorescence-detection
#10
Ning Zhang, Miaomiao Tian, Xin Liu, Li Yang
Because d-amino acids (AAs) play an essential role in the regulation of many processes in living cells, detection of D-AAs and assay of d-amino acid oxidase (DAAO) activity are of vital importance in bioanalytical science. However, the reliability and accuracy of DAAO assays could be interfered due to the facts that DAAO presents broad substrate activity towards different D-AAs and there could be abundant L-AA enantiomers in biological samples. In this study we presented the first application of optically gated capillary electrophoresis with LIF detection (OGCE-LIF) for efficient assay of DAAO activity...
March 14, 2018: Journal of Chromatography. A
https://www.readbyqxmd.com/read/29565811/imine-deaminase-activity-and-conformational-stability-of-uk114-the-mammalian-member-of-the-rid-protein-family-active-in-amino-acid-metabolism
#11
Genny Degani, Alberto Barbiroli, Luca Regazzoni, Laura Popolo, Maria Antonietta Vanoni
Reactive intermediate deaminase (Rid) protein family is a recently discovered group of enzymes that is conserved in all domains of life and is proposed to play a role in the detoxification of reactive enamines/imines. UK114, the mammalian member of RidA subfamily, was identified in the early 90s as a component of perchloric acid-soluble extracts from goat liver and exhibited immunomodulatory properties. Multiple activities were attributed to this protein, but its function is still unclear. This work addressed the question of whether UK114 is a Rid enzyme...
March 22, 2018: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/29549669/cloning-expression-and-characterization-of-thermostable-ydap-from-bacillus-licheniformis-9a
#12
Joseph D Wani Lako, Jada P Yengkopiong, William H L Stafford, Marla Tuffin, Don A Cowan
The Bacillus licheniformis ydaP gene encodes for a pyruvate oxidase that catalyses the oxidative decarboxylation of pyruvate to acetate and CO2 . The YdaP form of this enzyme was purified about 48.6-folds to homogeneity in three steps. The enzyme was recovered in a soluble form and demonstrated significant activity on pyruvate using 2, 6-dichlorophenolindophenol (DCPIP) as an artificial electron acceptor. HPLC analysis of the YdaP-enzyme catalysed conversion of pyruvate showed acetate as the sole product, confirming the putative identity of pyruvate oxidase...
March 15, 2018: Acta Biochimica Polonica
https://www.readbyqxmd.com/read/29547474/exfoliation-syndrome-a-disease-of-autophagy-and-loxl1-proteopathy
#13
Audrey M Bernstein, Robert Ritch, J Mario Wolosin
Exfoliation syndrome (XFS) is an age-related disease involving the deposition of aggregated fibrillar material (XFM) at extracellular matrices in tissues that synthesize elastic fibers. Its main morbidity is in the eye, where XFM accumulations form on the surface of the ciliary body, iris and lens. Exfoliation glaucoma (XFG) occurs in a high proportion of persons with XFS and can be a rapidly progressing disease. Worldwide, XFG accounts for about 25% of open-angle glaucoma cases. XFS and XFG show a sharp age-dependence, similarly to the many age-related diseases classified as aggregopathies...
March 15, 2018: Journal of Glaucoma
https://www.readbyqxmd.com/read/29532193/variations-of-l-and-d-amino-acid-levels-in-the-brain-of-wild-type-and-mutant-mice-lacking-d-amino-acid-oxidase-activity
#14
Siqi Du, Yadi Wang, Choyce A Weatherly, Kylie Holden, Daniel W Armstrong
D-amino acids are now recognized to be widely present in organisms and play essential roles in biological processes. Some D-amino acids are metabolized by D-amino acid oxidase (DAO), while D-Asp and D-Glu are metabolized by D-aspartate oxidase (DDO). In this study, levels of 22 amino acids and the enantiomeric compositions of the 19 chiral proteogenic entities have been determined in the whole brain of wild-type ddY mice (ddY/DAO+/+ ), mutant mice lacking DAO activity (ddY/DAO-/- ), and the heterozygous mice (ddY/DAO+/- ) using high-performance liquid chromatography-tandem mass spectrometry (HPLC-MS/MS)...
May 2018: Analytical and Bioanalytical Chemistry
https://www.readbyqxmd.com/read/29514286/gene-expression-and-activity-of-methionine-converting-enzymes-in-broiler-chickens-fed-methionine-isomers-or-precursors
#15
Shuai Zhang, Elizabeth R Gilbert, Kevin J T Noonan, Behnam Saremi, Eric A Wong
Common dietary supplemental methionine (Met) sources include DL-methionine (DL-Met) and the Met precursor DL-2-hydroxy-4-(methylthio) butanoic acid (DL-HMTBA). For bio-utilization, D-Met and DL-HMTBA are converted into L-Met through oxidation and transamination. The objective of this study was to determine the effect of different dietary supplemental Met sources on gene expression and enzyme activity of Met oxidases in male broiler chickens. Liver, muscle, duodenum, jejunum, and ileum were collected at days 10 (d 10), 21 (d 21), and 26 (d 26) post-hatch from male broiler chickens that were fed a basal diet deficient in sulfur amino acids (SAA) (control), or the control diet supplemented with DL-Met, L-Met, or DL-HMTBA to meet SAA requirements...
June 1, 2018: Poultry Science
https://www.readbyqxmd.com/read/29509674/amperometric-self-referencing-ceramic-based-microelectrode-arrays-for-d-serine-detection
#16
Diana Campos-Beltrán, Åsa Konradsson-Geuken, Jorge E Quintero, Lisa Marshall
D-serine is the major D-amino acid in the mammalian central nervous system. As the dominant co-agonist of the endogenous synaptic NMDA receptor, D-serine plays a role in synaptic plasticity, learning, and memory. Alterations in D-serine are linked to neuropsychiatric disorders including schizophrenia. Thus, it is of increasing interest to monitor the concentration of D-serine in vivo as a relevant player in dynamic neuron-glia network activity. Here we present a procedure for amperometric detection of D-serine with self-referencing ceramic-based microelectrode arrays (MEAs) coated with D-amino acid oxidase from the yeast Rhodotorula gracilis (RgDAAO)...
March 6, 2018: Biosensors
https://www.readbyqxmd.com/read/29487852/focus-on-the-role-of-d-serine-and-d-amino-acid-oxidase-in-amyotrophic-lateral-sclerosis-motor-neuron-disease-als
#17
REVIEW
Nazanin R Kondori, Praveen Paul, Jacqueline P Robbins, Ke Liu, John C W Hildyard, Dominic J Wells, Jacqueline S de Belleroche
We have investigated a pathogenic mutation in D-amino acid oxidase (DAO), DAOR199W , associated with familial Amyotrophic Lateral Sclerosis (ALS) that impairs D-serine metabolism and causes protein aggregation, autophagy and cell death in motor neuron cell lines. These features are consistent with the pathogenic processes occurring in ALS but most importantly, we have demonstrated that activation of the formation of ubiquitinated protein inclusions, increased autophagosome production and apoptotic cell death caused by the mutation in cell lines are attenuated by 5,7-dichlorokynurenic acid (DCKA), a selective inhibitor of the glycine/D-serine binding site of the NMDA receptor...
2018: Frontiers in Molecular Biosciences
https://www.readbyqxmd.com/read/29472125/discovery-of-isatin-and-1h-indazol-3-ol-derivatives-as-d-amino-acid-oxidase-daao-inhibitors
#18
Bence Szilágyi, Péter Kovács, György G Ferenczy, Anita Rácz, Krisztina Németh, Júlia Visy, Pál Szabó, Janez Ilas, György T Balogh, Katalin Monostory, István Vincze, Tamás Tábi, Éva Szökő, György M Keserű
d-Amino acid oxidase (DAAO) is a potential target in the treatment of schizophrenia as its inhibition increases brain d-serine level and thus contributes to NMDA receptor activation. Inhibitors of DAAO were sought testing [6+5] type heterocycles and identified isatin derivatives as micromolar DAAO inhibitors. A pharmacophore and structure-activity relationship analysis of isatins and reported DAAO inhibitors led us to investigate 1H-indazol-3-ol derivatives and nanomolar inhibitors were identified. The series was further characterized by pKa and isothermal titration calorimetry measurements...
May 1, 2018: Bioorganic & Medicinal Chemistry
https://www.readbyqxmd.com/read/29459050/n-methyl-d-aspartate-type-glutamate-receptor-modulators-and-related-medications-for-the-enhancement-of-auditory-system-plasticity-in-schizophrenia
#19
Joshua T Kantrowitz
Deficits in N-methyl-d-aspartate-type (NMDAR) function contribute to cognitive deficits in schizophrenia, particularly dysfunction in neuroplasticity, defined as reduced learning during training on exercises that place implicit, increasing demands on early sensory (auditory and visual) information processing. Auditory mismatch negativity (MMN) can be both a target engagement biomarker for the NMDAR and a proxy measure of neurophysiological plasticity. This review covers the evidence for using NMDAR modulator and related compounds for enhancement of cognition, with a particular focus on early auditory processing/plasticity...
February 17, 2018: Schizophrenia Research
https://www.readbyqxmd.com/read/29425807/inhibition-of-echis-carinatus-venom-by-dna-a-promising-therapeutic-molecule-for-snakebite-management
#20
Basavarajaiah Swethakumar, Somanathapura K NaveenKumar, Gajanan D Katkar, Kesturu S Girish, Kempaiah Kemparaju
BACKGROUND: E. carinatus bite is a serious threat to South-Asian countries including India, as it causes the highest number of deaths and debilitating sustained tissue necrosis at the bite site. One of our previous studies has demonstrated the strong interaction between DNA and E. carinatus venom. Therefore, in this study, the effect of DNA on E. carinatus venom has been examined. METHODS: Here we show that calf thymus DNA interact strongly with E. carinatus venom and inhibits its enzymatic and pharmacological activities such as proteolytic, hemolytic, hyaluronidase, L-amino acid oxidase, NETosis, hemorrhage, pro-coagulant, and lethality...
May 2018: Biochimica et Biophysica Acta
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