keyword
https://read.qxmd.com/read/38652107/a-logic-incorporated-gene-regulatory-network-deciphers-principles-in-cell-fate-decisions
#1
JOURNAL ARTICLE
Gang Xue, Xiaoyi Zhang, Wanqi Li, Lu Zhang, Zongxu Zhang, Xiaolin Zhou, Di Zhang, Lei Zhang, Zhiyuan Li
Organisms utilize gene regulatory networks (GRN) to make fate decisions, but the regulatory mechanisms of transcription factors (TF) in GRNs are exceedingly intricate. A longstanding question in this field is how these tangled interactions synergistically contribute to decision-making procedures. To comprehensively understand the role of regulatory logic in cell fate decisions, we constructed a logic-incorporated GRN model and examined its behavior under two distinct driving forces (noise-driven and signal-driven)...
April 23, 2024: ELife
https://read.qxmd.com/read/38650008/growth-impairment-in-children-with-atrophic-autoimmune-thyroiditis-and-pituitary-hyperplasia
#2
JOURNAL ARTICLE
Domenico Corica, Tiziana Abbate, Anna Malgorzata Kucharska, Malgorzata Wojcik, Francesco Vierucci, Mariella Valenzise, Alessandra Li Pomi, Giorgia Pepe, Gerdi Tuli, Beata Pyrzak, Tommaso Aversa, Malgorzata Wasniewska
BACKGROUND: Atrophic autoimmune thyroiditis (AAT) is a rare phenotype of autoimmune thyroiditis (AT) in pediatric age. AAT occurs without thyroid enlargement leading to a delay in its diagnosis. Growth impairment is infrequent in autoimmune thyroiditis, if timely diagnosed. Prolonged severe hypothyroidism is a rare cause of pituitary hyperplasia (PH) in childhood. Loss of thyroxine negative feedback causes a TRH-dependent hyperplasia of pituitary thyrotroph cells resulting in adenohypophysis enlargement...
April 23, 2024: Italian Journal of Pediatrics
https://read.qxmd.com/read/38645438/-ginkgo-biloba-extract-ameliorates-skin-fibrosis-in-a-bleomycin-induced-mouse-model-of-systemic-sclerosis
#3
JOURNAL ARTICLE
Beomgu Lee, Jong Seong Roh, Hoim Jeong, Yerin Kim, Jihyeon Lee, Changun Yun, Jiyoung Park, Da-Sol Kim, Jungsoo Lee, Min Wook So, Aran Kim, Dong Hyun Sohn, Seung-Geun Lee
Systemic sclerosis (SSc) is a chronic autoimmune disease characterized by skin and internal organ fibrosis and obliterative vasculopathy. Few effective treatments are currently available for fibrosis in SSc, therefore, demand persists for novel therapies. Although use of Ginkgo biloba extract (GBE) has been reported to improve blood circulation and alleviate liver and lung fibrosis, its effect on skin fibrosis in SSc remains unclear. In this study, the effects and underlying mechanisms of GBE on skin fibrosis in bleomycin (BLM)-induced mouse model of SSc was investigated...
2024: Animal Cells and Systems
https://read.qxmd.com/read/38645220/transdifferentiation-is-uncoupled-from-progenitor-pool-expansion-during-hair-cell-regeneration-in-the-zebrafish-inner-ear
#4
Marielle O Beaulieu, Eric D Thomas, David W Raible
UNLABELLED: Death of mechanosensory hair cells in the inner ear is a common cause of auditory and vestibular impairment in mammals, which have a limited ability to regrow these cells after damage. In contrast, non-mammalian vertebrates including zebrafish can robustly regenerate hair cells following severe organ damage. The zebrafish inner ear provides an understudied model system for understanding hair cell regeneration in organs that are highly conserved with their mammalian counterparts...
April 11, 2024: bioRxiv
https://read.qxmd.com/read/38645025/kidney-collecting-duct-cell-type-composition-is-regulated-by-notch-signaling-via-modulation-of-mtorc1
#5
Jennifer deRiso, Malini Mukherjee, Madhusudhana Janga, Alicia Simmons, Michael Kareta, Jianning Tao, Indra Chandrasekar, Kameswaran Surendran
The plasticity and diversity of cell types with specialized functions likely defines the capacity of multicellular organisms to adapt to physiologic stressors. The kidney collecting ducts contribute to water, electrolyte, and pH homeostasis and are composed of mature intermingled epithelial cell types that are susceptible to transdifferentiate. The conversion of kidney collecting duct principal cells to intercalated cells is actively inhibited by Notch signaling to ensure urine concentrating capability. Here we identify Hes1, a target of Notch signaling, allows for maintenance of functionally distinct epithelial cell types within the same microenvironment by regulating mechanistic target of rapamycin complex 1 (mTORC1) activity...
April 9, 2024: bioRxiv
https://read.qxmd.com/read/38644760/the-multifaceted-role-of-macrophage-mitophagy-in-sio-2-induced-pulmonary-fibrosis-a-brief-review
#6
REVIEW
Yu-Ting Zhou, Shuang Li, Shu-Ling Du, Jia-Hui Zhao, Ya-Qiong Cai, Zhao-Qiang Zhang
Prolonged exposure to environments with high concentrations of crystalline silica (CS) can lead to silicosis. Macrophages play a crucial role in the pathogenesis of silicosis. In the process of silicosis, silica (SiO2 ) invades alveolar macrophages (AMs) and induces mitophagy which usually exists in three states: normal, excessive, and/or deficiency. Different mitophagy states lead to corresponding toxic responses, including successful macrophage repair, injury, necrosis, apoptosis, and even pulmonary fibrosis...
April 22, 2024: Journal of Applied Toxicology: JAT
https://read.qxmd.com/read/38638855/diverse-and-reprogrammable-mechanisms-of-malignant-cell-transformation-in-lymphocytes-pathogenetic-insights-and-translational-implications
#7
REVIEW
Mariusz A Wasik, Patricia M Kim, Reza Nejati
While normal B- and T-lymphocytes require antigenic ligands to become activated via their B- and T-cell receptors (BCR and TCR, respectively), B- and T-cell lymphomas show the broad spectrum of cell activation mechanisms regarding their dependence on BCR or TCR signaling, including loss of such dependence. These mechanisms are generally better understood and characterized for B-cell than for T-cell lymphomas. While some lymphomas, particularly the indolent, low-grade ones remain antigen-driven, other retain dependence on activation of their antigen receptors seemingly in an antigen-independent manner with activating mutations of the receptors playing a role...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38631549/stromal-rigidity-stress-accelerates-pancreatic-intraepithelial-neoplasia-progression-and-chromosomal-instability-via-nuclear-ptk2-localization
#8
JOURNAL ARTICLE
Li-Yun Ding, Chia-Jung Chang, Szu-Ying Chen, Kuan-Lin Chen, Yueh-Shan Li, Yun-Chieh Wu, Ting-Yi Hsu, Hsin-Yu Ying, Hsin-Yi Wu, Michael W Hughes, Chia-Yih Wang, Chih-Han Chang, Ming-Jer Tang, Woei-Jer Chuang, Yan-Shen Shan, Chia-Jung Chang, Po-Hsien Huang
Since the mechanotransduction by stromal stiffness stimulates the rupture and repair of the nuclear envelope in pancreatic progenitor cells, accumulated genomic aberrations are under selection in the tumor microenvironment. Analysis of cell growth, micronuclei, and γH2AX foci links to mechanotransduction pressure in vivo during serial orthotopic passages of mouse KrasLSL-G12D/+ ;Trp53flox/flox ;Pdx1-Cre (KPC) cancer cells in the tumor and in migrating through the size-restricted 3μm micropores. To search for pancreatic cancer cell-of-origin, analysis of single-cell datasets revealed that the ECM shapes an alternate route of acinar-ductal transdifferentiation of acinar cells into a central hub of elegantly restrained TOP2A-overexpressing cancer cells that spread out as unique cancer clusters with copy number amplifications in MYC-PTK2 locus and PIK3CA...
April 15, 2024: American Journal of Pathology
https://read.qxmd.com/read/38624159/composite-histiocytic-sarcoma-and-chronic-lymphocytic-leukemia-small-lymphocytic-lymphoma-of-the-ocular-adnexa
#9
JOURNAL ARTICLE
Chenxu Shi, Andrew Lytle, Tatyana Milman, Robert Penne, Adam Bagg
Histiocytic sarcoma (HS) is a rare and aggressive hematologic neoplasm characterized by the proliferation of malignant histiocytes. It infrequently presents with periorbital involvement. Here we present the first documented case of ocular adnexal histiocytic sarcoma composite with chronic lymphocytic leukemia/small lymphocytic lymphoma and provide compelling evidence for the transdifferentiation of chronic lymphocytic leukemia/small lymphocytic lymphoma to histiocytic sarcoma in an 80-year-old woman. Comprehending the clinicopathological characteristics of histiocytic sarcoma and various other histiocytic proliferations and neoplasms affecting orbital and ocular structures is imperative for ophthalmic surgeons and pathologists...
April 11, 2024: Ophthalmic Plastic and Reconstructive Surgery
https://read.qxmd.com/read/38616256/mechanism-of-sodium-butyrate-a-metabolite-of-gut-microbiota-regulating-cardiac-fibroblast-transdifferentiation-via-the-nlrp3-caspase-1-pyroptosis-pathway
#10
JOURNAL ARTICLE
Tiancheng Dong, Dingkao Huang, Zhengzheng Jin
BACKGROUND: Cardiac fibroblasts (CFs) are activated after initial injury, and then differentiate into myofibroblasts (MFs), which play a pivotal role as the primary mediator cells in pathological remodeling. Sodium butyrate (NaB), being a metabolite of gut microbiota, exhibits anti-inflammatory property in local therapies on sites other than the intestine. Thus, this study aimed to probe the mechanism by which NaB regulates CFs transdifferentiation through the NLRP3/Caspase-1 pyroptosis pathway...
April 15, 2024: Journal of Cardiothoracic Surgery
https://read.qxmd.com/read/38614297/update-on-the-transdifferentiation-of-pancreatic-cells-into-functional-beta-cells-for-treating-diabetes
#11
REVIEW
Renata Spezani, Pedro H Reis-Barbosa, Carlos A Mandarim-de-Lacerda
The increasing global prevalence and associated comorbidities need innovative approaches for type 2 diabetes mellitus (T2DM) prevention and treatment. Genetics contributes significantly to T2DM susceptibility, and genetic counseling is significant in detecting and informing people about the diabetic risk. T2DM is also intricately linked to overnutrition and obesity, and nutritional advising is beneficial to mitigate diabetic evolution. However, manipulating pancreatic cell plasticity and transdifferentiation could help beta cell regeneration and glucose homeostasis, effectively contributing to the antidiabetic fight...
April 11, 2024: Life Sciences
https://read.qxmd.com/read/38610646/fibrosis-in-chronic-kidney-disease-pathophysiology-and-therapeutic-targets
#12
REVIEW
Allison B Reiss, Berlin Jacob, Aarij Zubair, Ankita Srivastava, Maryann Johnson, Joshua De Leon
Chronic kidney disease (CKD) is a slowly progressive condition characterized by decreased kidney function, tubular injury, oxidative stress, and inflammation. CKD is a leading global health burden that is asymptomatic in early stages but can ultimately cause kidney failure. Its etiology is complex and involves dysregulated signaling pathways that lead to fibrosis. Transforming growth factor (TGF)-β is a central mediator in promoting transdifferentiation of polarized renal tubular epithelial cells into mesenchymal cells, resulting in irreversible kidney injury...
March 25, 2024: Journal of Clinical Medicine
https://read.qxmd.com/read/38608444/foxf1-reverses-lung-fibroblasts-transdifferentiation-via-inhibiting-tgf-%C3%AE-smad2-3-pathway-in-silica-induced-pulmonary-fibrosis
#13
JOURNAL ARTICLE
Botao Hu, Xuesong Zhang, Hui Fan, Xiaofei Jin, Yuanmeng Qi, Ruimin Liu, Xiaoying Li, Meixiu Duan, Chengpeng Zhang, Shiyu Li, Wu Yao, Changfu Hao
Silicosis is one of the most common and severe types of pneumoconiosis and is characterized by lung dysfunction, persistent lung inflammation, pulmonary nodule formation, and irreversible pulmonary fibrosis. The transdifferentiation of fibroblasts into myofibroblasts is one of the main reasons for the exacerbation of silicosis. However, the underlying mechanism of transcription factors regulating silicosis fibrosis has not been clarified. The aim of this study was to investigate the potential mechanism of transcription factor FOXF1 in fibroblast transdifferentiation in silica-induced pulmonary fibrosis...
April 11, 2024: International Immunopharmacology
https://read.qxmd.com/read/38597972/bioengineered-msc-cxcr2-transdifferentiated-keratinocyte-like-cell-derived-organoid-potentiates-skin-regeneration-through-erk1-2-and-stat3-signaling-in-diabetic-wound
#14
JOURNAL ARTICLE
Subholakshmi Choudhury, Neha R Dhoke, Shilpa Chawla, Amitava Das
Skin regeneration is severely compromised in diabetic foot ulcers. Allogeneic mesenchymal stem cell (MSC) transplantation is limited due to the poor engraftment, mitogenic, and differentiation potential in the harsh wound microenvironment. Thus, to improve the efficacy of cell therapy, the chemokine receptor Cxcr2 was overexpressed in MSCs (MSCCxcr2 ). CXCL2/CXCR2 axis induction led to the enhanced proliferation of MSCs through the activation of STAT3 and ERK1/2 signaling. Transcriptional upregulation of FGFR2IIIb (KGF Receptor) promoter by the activated STAT3 and ERK1/2 suggested trans-differentiation of MSCs into keratinocytes...
April 10, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38594388/conversion-of-astrocyte-cell-lines-to-oligodendrocyte-progenitor-cells-using-small-molecules-and-transplantation-to-animal-model-of-multiple-sclerosis
#15
JOURNAL ARTICLE
Mohsen Sharifi-Kelishadi, Leila Zare, Yaghoub Fathollahi, Mohammad Javan
Astrocytes, the most prevalent cells in the central nervous system (CNS), can be transformed into neurons and oligodendrocyte progenitor cells (OPCs) using specific transcription factors and some chemicals. In this study, we present a cocktail of small molecules that target different signaling pathways to promote astrocyte conversion to OPCs. Astrocytes were transferred to an OPC medium and exposed for five days to a small molecule cocktail containing CHIR99021, Forskolin, Repsox, LDN, VPA and Thiazovivin before being preserved in the OPC medium for an additional 10 days...
April 9, 2024: Journal of Molecular Neuroscience: MN
https://read.qxmd.com/read/38593811/the-clinical-utility-and-diagnostic-implementation-of-human-subject-cell-transdifferentiation-followed-by-rna-sequencing
#16
JOURNAL ARTICLE
Shenglan Li, Sen Zhao, Jefferson C Sinson, Aleksandar Bajic, Jill A Rosenfeld, Matthew B Neeley, Mezthly Pena, Kim C Worley, Lindsay C Burrage, Monika Weisz-Hubshman, Shamika Ketkar, William J Craigen, Gary D Clark, Seema Lalani, Carlos A Bacino, Keren Machol, Hsiao-Tuan Chao, Lorraine Potocki, Lisa Emrick, Jennifer Sheppard, My T T Nguyen, Anahita Khoramnia, Paula Patricia Hernandez, Sandesh Cs Nagamani, Zhandong Liu, Christine M Eng, Brendan Lee, Pengfei Liu
RNA sequencing (RNA-seq) has recently been used in translational research settings to facilitate diagnoses of Mendelian disorders. A significant obstacle for clinical laboratories in adopting RNA-seq is the low or absent expression of a significant number of disease-associated genes/transcripts in clinically accessible samples. As this is especially problematic in neurological diseases, we developed a clinical diagnostic approach that enhanced the detection and evaluation of tissue-specific genes/transcripts through fibroblast-to-neuron cell transdifferentiation...
April 3, 2024: American Journal of Human Genetics
https://read.qxmd.com/read/38593211/from-morphology-to-methylome-epigenetic-studies-of-m%C3%A3-llerian-mesonephric-like-adenocarcinoma-reveal-similarities-to-cervical-mesonephric-adenocarcinoma-%C3%A2
#17
JOURNAL ARTICLE
Lawrence H Lin, Brooke E Howitt, David L Kolin
Mesonephric adenocarcinomas (MAs) and mesonephric-like adenocarcinomas (MLAs) are rare, aggressive neoplasms that arise in the gynecologic tract and show overlapping morphologic, immunohistochemical, and molecular features. While MAs occur in the cervix and are thought to arise from mesonephric remnants, MLAs occur in the endometrium and ovary and are believed to originate from transdifferentiation of Müllerian lesions. Both MAs and MLAs show a variety of architectural patterns, exhibit frequent expression of GATA3 by immunohistochemistry, and harbor KRAS mutations...
April 9, 2024: Journal of Pathology
https://read.qxmd.com/read/38591469/irisin-influences-the-in-vitro-differentiation-of-human-mesenchymal-stromal-cells-promoting-a-tendency-toward%C3%A2-beiging-adipogenesis
#18
JOURNAL ARTICLE
Girolamo Di Maio, Nicola Alessio, Alessia Ambrosino, Sura H A Al Sammarraie, Marcellino Monda, Giovanni Di Bernardo
Mammals exhibit two distinct types of adipose depots: white adipose tissue (WAT) and brown adipose tissue (BAT). While WAT primarily functions as a site for energy storage, BAT serves as a thermogenic tissue that utilizes energy and glucose consumption to regulate core body temperature. Under specific stimuli such as exercise, cold exposure, and drug treatment, white adipocytes possess a remarkable ability to undergo transdifferentiation into brown-like cells known as beige adipocytes. This transformation process, known as the "browning of WAT," leads to the acquisition of new morphological and physiological characteristics by white adipocytes...
April 9, 2024: Journal of Cellular Biochemistry
https://read.qxmd.com/read/38579535/the-role-of-macrophage-polarization-in-vascular-calcification
#19
REVIEW
Dan Li, Chu Fan, Xuepeng Li, Lin Zhao
Vascular calcification is an important factor in the high morbidity and mortality of Cardiovascular and cerebrovascular diseases. Vascular damage caused by calcification of the intima or media impairs the physiological function of the vascular wall. Inflammation is a central factor in the development of vascular calcification. Macrophages are the main inflammatory cells. Dynamic changes of macrophages with different phenotypes play an important role in the occurrence, progression and stability of calcification...
March 31, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38577624/cardiac-fibrogenesis-an-immuno-metabolic-perspective
#20
REVIEW
Md Monirul Hoque, Joy Olaoluwa Gbadegoye, Fasilat Oluwakemi Hassan, Amr Raafat, Djamel Lebeche
Cardiac fibrosis is a major and complex pathophysiological process that ultimately culminates in cardiac dysfunction and heart failure. This phenomenon includes not only the replacement of the damaged tissue by a fibrotic scar produced by activated fibroblasts/myofibroblasts but also a spatiotemporal alteration of the structural, biochemical, and biomechanical parameters in the ventricular wall, eliciting a reactive remodeling process. Though mechanical stress, post-infarct homeostatic imbalances, and neurohormonal activation are classically attributed to cardiac fibrosis, emerging evidence that supports the roles of immune system modulation, inflammation, and metabolic dysregulation in the initiation and progression of cardiac fibrogenesis has been reported...
2024: Frontiers in Physiology
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