keyword
https://read.qxmd.com/read/38634053/-ikzf1-plus-is-a-frequent-biomarker-of-adverse-prognosis-in-mexican-pediatric-patients-with-b-acute-lymphoblastic-leukemia
#1
JOURNAL ARTICLE
Joaquin Garcia-Solorio, Juan Carlos Núñez-Enriquez, Marco Jiménez-Olivares, Janet Flores-Lujano, Fernanda Flores-Espino, Carolina Molina-Garay, Alejandra Cervera, Diana Casique-Aguirre, José Gabriel Peñaloza-Gonzalez, Ma Del Rocío Baños-Lara, Ángel García-Soto, César Alejandro Galván-Díaz, Alberto Olaya-Vargas, Hilario Flores Aguilar, Minerva Mata-Rocha, Miguel Ángel Garrido-Hernández, Juan Carlos Solís-Poblano, Nuria Citlalli Luna-Silva, Lena Sarahi Cano-Cuapio, Pierre Mitchel Aristil-Chery, Fernando Herrera-Quezada, Karol Carrillo-Sanchez, Anallely Muñoz-Rivas, Luis Leonardo Flores-Lagunes, Elvia Cristina Mendoza-Caamal, Beatriz Eugenia Villegas-Torres, Vincent González-Osnaya, Elva Jiménez-Hernández, José Refugio Torres-Nava, Jorge Alfonso Martín-Trejo, María de Lourdes Gutiérrez-Rivera, Rosa Martha Espinosa-Elizondo, Laura Elizabeth Merino-Pasaye, María Luisa Pérez-Saldívar, Silvia Jiménez-Morales, Everardo Curiel-Quesada, Haydeé Rosas-Vargas, Juan Manuel Mejía-Arangure, Carmen Alaez-Verson
BACKGROUND: Recurrent genetic alterations contributing to leukemogenesis have been identified in pediatric B-cell Acute Lymphoblastic Leukemia (B-ALL), and some are useful for refining classification, prognosis, and treatment selection. IKZF1plus is a complex biomarker associated with a poor prognosis. It is characterized by IKZF1 deletion coexisting with PAX5 , CDKN2A/2B , or PAR1 region deletions. The mutational spectrum and clinical impact of these alterations have scarcely been explored in Mexican pediatric patients with B-ALL...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38612871/gut-microbiome-and-transcriptomic-changes-in-cigarette-smoke-exposed-mice-compared-to-copd-and-cd-patient-datasets
#2
JOURNAL ARTICLE
Lei Wang, Pim J Koelink, Johan Garssen, Gert Folkerts, Paul A J Henricks, Saskia Braber
Chronic obstructive pulmonary disease (COPD) patients and smokers have a higher incidence of intestinal disorders. The aim of this study was to gain insight into the transcriptomic changes in the lungs and intestines, and the fecal microbial composition after cigarette smoke exposure. Mice were exposed to cigarette smoke and their lung and ileum tissues were analyzed by RNA sequencing. The top 15 differentially expressed genes were investigated in publicly available gene expression datasets of COPD and Crohn's disease (CD) patients...
April 5, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38575802/diffuse-large-b-cell-lymphoma-with-dna-copy-number-changes-in-a-japanese-black-calf
#3
JOURNAL ARTICLE
Masaki Maezawa, Ken-Ichi Watanabe, Yoshiyasu Kobayashi, Kio Yoshida, James K Chambers, Kazuyuki Uchida, Reo Maruyama, Hisashi Inokuma
A 2-month-old Japanese Black calf exhibited mandibular and superficial cervical lymph node swelling. Fine needle aspiration cytology of the superficial cervical lymph node revealed large lymphoblast-like cells with mitoses. Hematological examination revealed remarkable lymphocytosis with atypical lymphocytes. Increased activities of serum total lactate dehydrogenase and thymidine kinase were detected. At necropsy, generalized swelling of lymph nodes was observed. Histopathological analysis revealed diffuse proliferation of medium-sized round centroblastic neoplastic cells that were positive for CD20, CD79α, PAX5, and BLA-36, and negative for CD3, CD5, CD10, and CD34...
April 5, 2024: Veterinary Research Communications
https://read.qxmd.com/read/38573563/alk-positive-large-b-cell-lymphoma-alk%C3%A2-%C3%A2-lbcl-with-aberrant-cd3-expression
#4
JOURNAL ARTICLE
Jess Baker, Sara L Zadeh, Nadine S Aguilera
ALK-positive ( +) large B cell lymphoma (ALK + LBCL) is a rare distinct subtype of diffuse large B cell lymphoma presenting with high stage and aggressive behavior. Although B cell markers such as CD20, CD19, and CD22 are generally negative, plasmacytic markers including CD138, CD38, and MUM1 are positive. T cell markers are negative with rare exceptions. We report an unusual case of ALK1 + LBCL in a 58-year-old man with partial expression of CD3 without other T cell antigen expression...
April 4, 2024: Journal of Hematopathology
https://read.qxmd.com/read/38571503/case-report-a-familial-b-acute-lymphoblastic-leukemia-associated-with-a-new-germline-pathogenic-variant-in-pax5-the-first-report-in-mexico
#5
Joaquín García-Solorio, Octavio Martínez-Villegas, Ulises Rodríguez-Corona, Carolina Molina-Garay, Marco Jiménez-Olivares, Karol Carrillo-Sanchez, Elvia C Mendoza-Caamal, Anallely Muñoz-Rivas, Beatriz E Villegas-Torres, Alejandra Cervera, Luis L Flores-Lagunes, Carmen Alaez-Verson
B-cell acute lymphoblastic leukemia (B-ALL) is one of the most common childhood cancers worldwide. Although most cases are sporadic, some familial forms, inherited as autosomal dominant traits with incomplete penetrance, have been described over the last few years. Germline pathogenic variants in transcription factors such as PAX5, IKZF1 , and ETV6 have been identified as causal in familial forms. The proband was a 7-year-old Mexican girl diagnosed with high-risk B-ALL at five years and 11 months of age. Family history showed that the proband's mother had high-risk B-ALL at 16 months of age...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38565741/cytokines-activated-nuclear-ikk%C3%AE-fat10-pathway-induces-breast-cancer-tamoxifen-resistance
#6
JOURNAL ARTICLE
Xueyan Chen, Weilin Wu, Ji-Hak Jeong, Matjaz Rokavec, Rui Wei, Shaolong Feng, Werner Schroth, Hiltrud Brauch, Shangwei Zhong, Jun-Li Luo
Endocrine therapy that blocks estrogen signaling is the most effective treatment for patients with estrogen receptor positive (ER+ ) breast cancer. However, the efficacy of agents such as tamoxifen (Tam) is often compromised by the development of resistance. Here we report that cytokines-activated nuclear IKKα confers Tam resistance to ER+ breast cancer by inducing the expression of FAT10, and that the expression of FAT10 and nuclear IKKα in primary ER+ human breast cancer was correlated with lymphotoxin β (LTB) expression and significantly associated with relapse and metastasis in patients treated with adjuvant mono-Tam...
April 1, 2024: Science China. Life Sciences
https://read.qxmd.com/read/38540410/population-structure-and-selection-signal-analysis-of-nanyang-cattle-based-on-whole-genome-sequencing-data
#7
JOURNAL ARTICLE
Yan Zhang, Zhitong Wei, Man Zhang, Shiwei Wang, Tengyun Gao, Hetian Huang, Tianliu Zhang, Hanfang Cai, Xian Liu, Tong Fu, Dong Liang
With a rich breeding history, Nanyang cattle (NY cattle) have undergone extensive natural and artificial selection, resulting in distinctive traits such as high fertility, excellent meat quality, and disease resistance. This makes them an ideal model for studying the mechanisms of environmental adaptability. To assess the population structure and genetic diversity of NY cattle, we performed whole-genome resequencing on 30 individuals. These data were then compared with published whole-genome resequencing data from 432 cattle globally...
March 11, 2024: Genes
https://read.qxmd.com/read/38539499/-pax5-alterations-in-a-consecutive-childhood-b-cell-acute-lymphoblastic-leukemia-cohort-treated-using-the-all-ic-bfm-2009-protocol
#8
JOURNAL ARTICLE
Klementina Črepinšek, Nika Klobučar, Tine Tesovnik, Robert Šket, Barbara Jenko Bizjan, Jernej Kovač, Marko Kavčič, Tomaž Prelog, Lidija Kitanovski, Janez Jazbec, Maruša Debeljak
In this study, we aimed to identify patients within our B-ALL cohort with altered PAX5 . Our objective was to use a comprehensive analysis approach to characterize the types of genetic changes, determine their origin (somatic/germline), and analyze the clinical outcomes associated with them. A consecutive cohort of 99 patients with B-ALL treated at the Children's Hospital of the UMC Ljubljana according to the ALL IC-BFM 2009 protocol was included in our study. We used RNA sequencing data for gene expression analysis, fusion gene detection and single nucleotide variant identification, multiplex-ligation dependent probe amplification for copy number variation assessment, and Sanger sequencing for germline variant detection...
March 15, 2024: Cancers
https://read.qxmd.com/read/38533618/tertiary-lymphoid-organs-in-wild-boar-exposed-to-a-low-virulent-isolate-of-african-swine-fever-virus
#9
JOURNAL ARTICLE
Néstor Porras, José M Sánchez-Vizcaíno, Antonio Rodríguez-Bertos, Aleksandra Kosowska, José Á Barasona
Despite the great interest in the development of a vaccine against African swine fever (ASF) in wild boar, the immunological mechanisms that induce animal protection are still unknown. For this purpose, tertiary lymphoid organs (TLOs) of wild boar were characterised and compared with mucosa-associated lymphoid tissues (MALTs) by histopathology, histomorphometry and immunohistochemistry (CD3, CD79, PAX5, LYVE1, fibronectin). In addition, real-time polymerase chain reaction (qPCR) and immunohistochemistry (p72) were used to evaluate the presence of ASF virus (ASFV) in blood and tissues samples, respectively...
December 2024: Veterinary Quarterly
https://read.qxmd.com/read/38522565/astragalus-polysaccharides-ameliorates-experimental-colitis-by-regulating-memory-b-cells-metabolism
#10
JOURNAL ARTICLE
Yifei Deng, Lizhao Song, Jiaqi Huang, Wen Zhou, Yali Liu, Xiuyun Lu, Haimei Zhao, Duanyong Liu
It is well-established that the reduced Memory B cells (MBCs) play an important role in the pathogenesis of ulcerative colitis (UC), rendering them a potential therapeutic target for UC intervention. Astragalus polysaccharide (APS), a primary active constituent derived from the classic traditional Chinese medicine Astragalus membranaceus (AM), has been used for centuries in the treatment of UC in both human and animal subjects due to its renowned immunomodulatory properties. However, it is unknown whether APS can regulate MBCs to alleviate experimental colitis...
March 22, 2024: Chemico-biological Interactions
https://read.qxmd.com/read/38513794/primary-third-eyelid-lymphoma-with-aggressive-local-behavior-in-a-dog
#11
Vanessa de C Pereira, Luan C Henker, Jean C O Menegatt, Andréia Vielmo, Marianna Bertolini, Wilson M Legramanti, Welden Panziera, Marcele B Bandinelli, Saulo P Pavarini
Lymphoma is the most common hematopoietic neoplasm in dogs. However, cases primarily involving the third eyelid are rarely reported in the species. The subtype most frequently described in this location is marginal zone lymphoma of the mucosa-associated lymphoid tissue, which has an indolent behavior. A 10-year-old intact female Poodle was presented with a 2-month history of a nodule in the left third eyelid for evaluation. This nodule was surgically excised; however, local recurrence was detected nineteen days postoperatively, with the formation of a mass that expanded and replaced the extraocular orbital tissues and infiltrated the eye...
March 19, 2024: Topics in Companion Animal Medicine
https://read.qxmd.com/read/38497417/insulin-like-growth-factor-ii-mrna-binding-protein-3-is-a-highly-sensitive-marker-for-intravascular-large-b-cell-lymphoma-immunohistochemical-analysis-of-152-pathology-specimens-from-88-patients
#12
JOURNAL ARTICLE
Manduwa Saka, Masakazu Fujimoto, Kai Mizoguchi, Marina Tsujimura, Miho Saeki, Masahiro Hirata, Shinsuke Shibuya, Kentaro Odani, Takaki Sakurai, Yoshiaki Yuba, Koki Moriyoshi, Naoki Nakajima, Shinji Sumiyoshi, Fumihiko Kono, Kazuo Ono, Tomoyuki Shirase, Chihiro Watanabe, Akihiko Yoshizawa, Hironori Haga
Intravascular large B-cell lymphoma (IVLBCL) is a rare type of aggressive extranodal large B-cell lymphoma characterized by the selective growth of lymphoma cells within the lumina of blood vessels, particularly capillaries. IVLBCL lacks mass formation, and its diagnosis can be challenging. We analyzed the utility of insulin-like growth factor II mRNA-binding protein 3 (IMP3) immunohistochemistry for IVLBCL diagnosis in various organs. Double staining with paired box 5 (PAX5) was performed for validation. Overall, 152 pathological specimens (111 positive and 41 negative for IVLBCL) obtained from 88 patients with a diagnosis of IVLBCL were stained for IMP3 and IMP3/PAX5...
March 18, 2024: American Journal of Surgical Pathology
https://read.qxmd.com/read/38479427/refining-risk-stratification-in-paediatric-b-acute-lymphoblastic-leukaemia-combining-ikzf1-plus-and-day-15-mrd-positivity
#13
JOURNAL ARTICLE
Hsi-Che Liu, Ying-Jung Huang, Tang-Her Jaing, Kang-Hsi Wu, Shih-Hsiang Chen, Shih-Chung Wang, Ting-Chi Yeh, Chih-Cheng Hsiao, Te-Kau Chang, Hsiu-Ju Yen, Fang-Liang Huang, Pei-Chin Lin, Jen-Yin Hou, Jiunn-Ming Sheen, Yu-Mei Liao, Tsung-Yen Chang, Yu-Chieh Chen, Shyh-Shin Chiou, Chao-Ping Yang, Ching-Hon Pui, Der-Cherng Liang, Lee-Yung Shih
This study investigates the potential utility of IKZF1 deletion as an additional high-risk marker for paediatric acute lymphoblastic leukaemia (ALL). The prognostic impact of IKZF1 status, in conjunction with minimal/measurable residual disease (MRD), was evaluated within the MRD-guided TPOG-ALL-2013 protocol using 412 newly diagnosed B-ALL patients aged 1-18. IKZF1 status was determined using multiplex ligation-dependent probe amplification. IKZF1 deletions, when co-occurring with CDKN2A, CDKN2B, PAX5 or PAR1 region deletions in the absence of ERG deletions, were termed IKZF1plus ...
March 13, 2024: British Journal of Haematology
https://read.qxmd.com/read/38404580/dna-methylation-regulates-b-cell-activation-via-repressing-pax5-expression-in-teleost
#14
JOURNAL ARTICLE
Yuan Shi, Zhuo Zhu, Qiuxuan Chen, Xinhua Chen
In mammals, the transcription factor Pax5 is a key regulator of B cell development and maturation and specifically expressed in naive/mature B cells but repressed upon B cell activation. Despite the long-standing proposal that Pax5 repression is essential for proper B cell activation, the underlying mechanisms remain largely elusive. In this study, we used a teleost model to elucidate the mechanisms governing Pax5 repression during B cell activation. Treatment with lipopolysaccharide (LPS) and chitosan oligosaccharide (COS) significantly enhanced the antibody secreting ability and phagocytic capacity of IgM+ B cells in large yellow croaker ( Larimichthys crocea ), coinciding with upregulated expression of activation-related genes, such as Bcl6, Blimp1, and sIgM, and downregulated expression of Pax5...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38400120/transcriptomic-analysis-reveals-sixteen-potential-genes-associated-with-the-successful-differentiation-of-antibody-secreting-cells-through-the-utilization-of-unfolded-protein-response-mechanisms-in-robust-responders-to-the-influenza-vaccine
#15
JOURNAL ARTICLE
Ahmed Tawfik, Takahisa Kawaguchi, Meiko Takahashi, Kazuya Setoh, Izumi Yamaguchi, Yasuharu Tabara, Kristel Van Steen, Anavaj Sakuntabhai, Fumihiko Matsuda
The seasonal influenza vaccine remains one of the vital recommended infection control measures for the elderly with chronic illnesses. We investigated the immunogenicity of a single dose of influenza vaccine in 123 seronegative participants and classified them into four distinct groups, determined by the promptness of vaccine response, the longevity of humoral immunity, and the likelihood of exhibiting cross-reactivity. Subsequently, we used transcriptional profiling and differential gene expression analysis to identify potential genes directly associated with the robust response to the vaccine...
January 29, 2024: Vaccines
https://read.qxmd.com/read/38394665/tyrosine-kinase-inhibitor-response-of-abl-class-acute-lymphoblastic-leukemia-the-role-of-kinase-type-and-sh3-domain
#16
JOURNAL ARTICLE
Inge van Outersterp, Sarah K Tasian, Caitlin Ej Reichert, Aurélie Boeree, Hester A de Groot-Kruseman, Gabriele Escherich, Judith M Boer, Monique L den Boer
Acute lymphoblastic leukemia (ALL) with fusions of ABL-class tyrosine kinase genes other than BCR::ABL1 occurs in approximately 3% of children with ALL. The tyrosine kinase genes involved in this BCR::ABL1-like (Ph-like) subtype include ABL1, PDGFRB, ABL2, and CSF1R, which each have up to ten described partner genes. ABL-class ALL resembles BCR::ABL1-positive ALL by a similar gene expression profile, a poor response to chemotherapy, and sensitivity to tyrosine kinase inhibitors (TKIs). There is a lack of comprehensive data regarding TKI sensitivity for the heterogeneous group of ABL-class ALL...
February 23, 2024: Blood
https://read.qxmd.com/read/38386975/tyrosine-kinase-inhibitor-resistance-in-de-novo-bcr-abl1-positive-bcp-all-beyond-kinase-domain-mutations
#17
JOURNAL ARTICLE
Inge van Outersterp, Judith M Boer, Cesca Van De Ven, Caitlin Ej Reichert, Aurélie Boeree, Brian Kruisinga, Hester A de Groot-Kruseman, Gabriele Escherich, Aniko Sijs-Szabo, Anita W Rijneveld, Monique L den Boer
A better understanding of ABL1-kinase domain mutation-independent causes of tyrosine kinase inhibitor (TKI) resistance is needed for BCR::ABL1-positive B-cell precursor acute lymphoblastic leukemia (BCP-ALL). While TKIs have dramatically improved outcomes, a subset of patients still experiences relapsed or refractory disease. We aimed to identify potential biomarkers for intrinsic TKI resistance at diagnosis in 32 pediatric and 19 adult BCR::ABL1-positive BCP-ALL samples. Reduced ex vivo imatinib sensitivity was observed in cells derived from newly diagnosed patients who relapsed after combined TKI and chemotherapy treatment compared with cells derived from patients who remained in continuous complete remission...
February 22, 2024: Blood Advances
https://read.qxmd.com/read/38380348/extracorporeal-photopheresis-reduces-fibrotic-and-inflammatory-transcriptomic-biological-marker-of-chronic-antibody-mediated-kidney-rejection
#18
JOURNAL ARTICLE
Arnaud Lionet, Marine Van Triempon, Martin Figeac, Victor Fages, Jean-Baptiste Gibier, François Provot, Mehdi Maanaoui, Nicolas Pottier, Christelle Cauffiez, François Glowacki
BACKGROUND: The benefit of extracorporeal photopheresis on the course of kidney transplant rejection is unknown. The aim of our study was to investigate the variations in transcriptomics on graft biopsies when extracorporeal photopheresis was used to treat chronic humoral rejection after kidney transplantation. METHODS: We retrospectively analyzed the mRNA expression of 770 genes of interest in graft biopsies performed before and after treatment. Eight patients received an average of 23 extracorporeal photopheresis sessions over 4 mo between the 2 biopsies...
March 2024: Transplantation Direct
https://read.qxmd.com/read/38378036/the-prognostic-significance-of-programmed-cell-death-protein-1-and-its-ligand-on-lymphoma-cells-and-tumor-immune-cells-in-diffuse-large-b-cell-lymphoma-not-otherwise-specified
#19
JOURNAL ARTICLE
Teja Cas Slak, Simona Miceska, Gorana Gasljevic, Lucka Boltezar, Veronika Kloboves-Prevodnik
BACKGROUND: Diffuse large B-cell lymphoma, not otherwise specified (DLBCL, NOS) is the most common type non-Hodgkin's lymphoma, where the treatment of relapsed/refractory cases is the major challenge. Programmed cell death protein 1 (PD-1) and its ligand PD-L1 play a crucial role in the negative regulation of the immune response against the disease. The aim of the study was to analyze the expression of PD-1 and PD-L1 on lymphoma cells (LCs) and tumor-immune cells (TICs) and to investigate their correlation with outcome...
March 1, 2024: Radiology and Oncology
https://read.qxmd.com/read/38348125/paired-box-5-pax5-gene-has-diagnostic-and-prognostic-potential-in-nasopharyngeal-carcinoma
#20
JOURNAL ARTICLE
Jiemei Ye, Xiaoying Huang, Weiling Qin, Pan Liang, Jun Zhao, Yinxin Ye, Huojin Ji, Xinyun Peng, Yushan Liang, Yonglin Cai
PURPOSE: Paired Box 5 (PAX5) is a transcription factor that is widely associated with carcinogenesis. PAX5 can maintain Epstein-Barr virus (EBV) latency in B cells, while a close association exists between EBV infection and nasopharyngeal carcinoma (NPC). However, there are very few reports on the correlation between PAX5 and NPC development. The aim of this study was to investigate the role of PAX5 in NPC. PATIENTS AND METHODS: The clinical value and prognostic significance of PAX5 in NPC and the association with PAX5 expression and immune cell infiltration were analyzed by multiple GEO datasets...
2024: International Journal of General Medicine
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