keyword
https://read.qxmd.com/read/37869988/transcriptional-control-of-motor-pool-formation-and-motor-circuit-connectivity-by-the-lim-hd-protein-isl2
#1
JOURNAL ARTICLE
Yunjeong Lee, In Seo Yeo, Namhee Kim, Dong-Keun Lee, Kyung-Tai Kim, Jiyoung Yoon, Jawoon Yi, Young Bin Hong, Byung-Ok Choi, Yoichi Kosodo, Daesoo Kim, Jihwan Park, Mi-Ryoung Song
The fidelity of motor control requires the precise positional arrangement of motor pools and the establishment of synaptic connections between them. During neural development in the spinal cord, motor nerves project to specific target muscles and receive proprioceptive input from these muscles via the sensorimotor circuit. LIM-homeodomain transcription factors are known to play a crucial role in successively restricting specific motor neuronal fates. However, their exact contribution to limb-based motor pools and locomotor circuits has not been fully understood...
October 23, 2023: ELife
https://read.qxmd.com/read/37649242/the-isl-lim-homeobox-2-transcription-factor-is-negatively-regulated-by-circadian-adrenergic-signaling-to-repress-the-expression-of-aanat-in-pinealocytes-of-the-rat-pineal-gland
#2
JOURNAL ARTICLE
Kuno M-J Mattern, Aurea S Blancas-Velázquez, Mikaella T Ngo, Signe Bille, Henrik Hertz, Tenna Bering, Martin F Rath
Melatonin is synthesized in the pineal gland during nighttime in response to nocturnal increase in the activity of the enzyme aralkylamine N-acetyltransferase (AANAT), the transcription of which is modulated by several homeodomain transcription factors. Recent work suggests that the homeodomain transcription factor ISL LIM homeobox 2 (ISL2) is expressed in the pineal gland, but its role is currently unknown. With the purpose of identifying the mechanisms that control pineal expression of Isl2 and the possible function of Isl2 in circadian pineal biology, we report that Isl2 is specifically expressed in the pinealocytes of the rat pineal gland...
August 30, 2023: Journal of Pineal Research
https://read.qxmd.com/read/37342918/functional-characterization-of-stap2b-in-zebrafish-vascular-development
#3
JOURNAL ARTICLE
Yi-Shan Wang, Yi-Ting Chen, Chang-Yi Wu
The genetic control and signaling pathways of vascular development are not comprehensively understood. Transcription factors Islet2 (Isl2) and nr2f1b are critical for vascular growth in zebrafish, and further transcriptome analysis has revealed potential targets regulated by isl2/nr2f1b. In this study, we focused on the potential activation gene signal-transducing adaptor protein 2b (stap2b) and revealed a novel role of stap2b in vascular development. stap2b mRNA was expressed in developing vessels, suggesting stap2b plays a role in vascularization...
July 2023: FASEB Journal: Official Publication of the Federation of American Societies for Experimental Biology
https://read.qxmd.com/read/36824359/the-isl2a-transcription-factor-regulates-pituitary-development-in-zebrafish
#4
JOURNAL ARTICLE
Chen-Yan Yan, Feng-Yao Wu, Feng Sun, Ya Fang, Rui-Jia Zhang, Chang-Run Zhang, Cao-Xu Zhang, Zheng Wang, Rui-Meng Yang, Liu Yang, Mei Dong, Qian-Yue Zhang, Xiao-Ping Ye, Huai-Dong Song, Shuang-Xia Zhao
BACKGROUND: ISL LIM homeobox 2, also known as insulin gene enhancer protein ISL-2 ( ISL2 ), is a transcription factor gene that participates in a wide range of developmental events. However, the role of ISL2 in the hypothalamus-pituitary-thyroid axis is largely unknown. In the present study, we characterized the expression patterns of ISL2 and revealed its regulative role during embryogenesis using zebrafish. METHODS: We used the CRISPR/Cas9 system to successfully establish homozygous ISL2 -orthologue ( isl2a and isl2b ) knockout zebrafish...
2023: Frontiers in Endocrinology
https://read.qxmd.com/read/35965581/case-report-isl2-is-involved-in-malignant-transformation-in-a-patient-with-multiple-relapsed-oligodendroglioma
#5
Shu-Na Chen, Zhongyong Wang, Di-Sheng Zhou, Xue-Qi Liu, Tao-Yi Mai, Zhao-Xia Dong, Miao Li, Xing-Ding Zhang, Lin Qi
The majority of oligodendrogliomas exhibit an intrinsic tendency to develop into malignant high-grade tumors. Angiogenesis is a major factor contributing to the malignant transformation of oligodendroglioma, and its molecular regulatory mechanism needs further study. We provide a case report of an oligodendroglioma patient with two recurrences whose disease progressed from WHO grade II to grade III. We showed that the expression of insulin gene enhancer protein (ISL2) and its angiogenic ability were positively correlated with the progression of oligodendroglioma...
2022: Frontiers in Oncology
https://read.qxmd.com/read/35740282/identification-of-novel-vascular-genes-downstream-of-islet2-and-nr2f1b-transcription-factors
#6
JOURNAL ARTICLE
Ru-Fang Li, Yi-Shan Wang, Fu-I Lu, Yi-Shan Huang, Chien-Chih Chiu, Ming-Hong Tai, Chang-Yi Wu
The genetic regulation of vascular development is not elucidated completely. We previously characterized the transcription factors Islet2 (Isl2) and Nr2f1b as being critical for vascular growth. In this study, we further performed combinatorial microarrays to identify genes that are potentially regulated by these factors. We verified the changed expression of several targets in isl2/nr2f1b morphants. Those genes expressed in vessels during embryogenesis suggested their functions in vascular development. We selectively assayed a potential target follistatin a (fsta )...
May 27, 2022: Biomedicines
https://read.qxmd.com/read/35508175/isl2-is-a-putative-tumor-suppressor-whose-epigenetic-silencing-reprograms-the-metabolism-of-pancreatic-cancer
#7
JOURNAL ARTICLE
Harun Ozturk, Harun Cingoz, Turan Tufan, Jiekun Yang, Sara J Adair, Krishna Seshu Tummala, Cem Kuscu, Meric Kinali, Gamze Comertpay, Sarbajeet Nagdas, Bernadette J Goudreau, Husnu Umit Luleyap, Yagmur Bingul, Timothy B Ware, Wiliam L Hwang, Ku-Lung Hsu, David F Kashatus, David T Ting, Navdeep S Chandel, Nabeel Bardeesy, Todd W Bauer, Mazhar Adli
Pancreatic ductal adenocarcinoma (PDA) cells reprogram their transcriptional and metabolic programs to survive the nutrient-poor tumor microenvironment. Through in vivo CRISPR screening, we discovered islet-2 (ISL2) as a candidate tumor suppressor that modulates aggressive PDA growth. Notably, ISL2, a nuclear and chromatin-associated transcription factor, is epigenetically silenced in PDA tumors and high promoter DNA methylation or its reduced expression correlates with poor patient survival. The exogenous ISL2 expression or CRISPR-mediated upregulation of the endogenous loci reduces cell proliferation...
June 6, 2022: Developmental Cell
https://read.qxmd.com/read/34659888/a-prognostic-score-based-on-long-term-survivor-unique-transcriptomic-signatures-predicts-patient-survival-in-pancreatic-ductal-adenocarcinoma
#8
JOURNAL ARTICLE
Eriko Katsuta, Michelle Huyser, Li Yan, Kazuaki Takabe
Pancreatic ductal adenocarcinoma (PDAC) is known for its poor prognosis with few long-term survivors. This study aimed to establish a prognostic score using unique transcriptomic profiles of long-term survivors to be used as a patient selection tool for meaningful clinical intervention in PDAC. In TCGA PDAC cohort, 16 genes were significantly upregulated in the long-term survivor tumors. A prognostic score was established using these 16 genes by LASSO Cox regression, and PHKG1, HOXA4, ISL2, DMRT3 and TRA2A gene expressions were included in the score...
2021: American Journal of Cancer Research
https://read.qxmd.com/read/33403724/dna-methylome-profiling-identifies-novel-methylated-genes-in-epithelial-ovarian-cancer-patients-with-platinum-resistance
#9
JOURNAL ARTICLE
Tian Hua, Shan Kang, Xiao-Fei Li, Yun-Jie Tian, Yan Li
AIM: Platinum-based chemotherapy is widely used for epithelial ovarian cancer (EOC). As high as 20-25% of EOC patients will not respond to the initial chemotherapy. Accumulated evidences have implied that DNA methylation may serve as a potential bio-marker for chemotherapy-resistant phenotypic screening; however, the pattern underlying primary platinum resistance remains unclear. METHODS: Reduced representation bisulfite sequencing (RRBS) analysis was performed to identify differences in methylation status between primary platinum-resistant patients Progression free survival (PFS) (PFS < 6 months, n = 8) and extreme sensitive patients (PFS ≥ 24 months, n = 8)...
March 2021: Journal of Obstetrics and Gynaecology Research
https://read.qxmd.com/read/32894165/the-u2af2-circrna-arf1-mir-342-3p-isl2-feedback-loop-regulates-angiogenesis-in-glioma-stem-cells
#10
JOURNAL ARTICLE
Yang Jiang, Jinpeng Zhou, Junshuang Zhao, Haiying Zhang, Long Li, Hao Li, Lian Chen, Jiangfeng Hu, Wei Zheng, Zhitao Jing
BACKGROUND: Glioma is the most common and lethal primary brain tumor in adults, and angiogenesis is one of the key factors contributing to its proliferation, aggressiveness, and malignant transformation. However, the discovery of novel oncogenes and the study of its molecular regulating mechanism based on circular RNAs (circRNAs) may provide a promising treatment target in glioma. METHODS: Bioinformatics analysis, qPCR, western blotting, and immunohistochemistry were used to detect the expression levels of ISL2, miR-342-3p, circRNA ARF1 (cARF1), U2AF2, and VEGFA...
September 7, 2020: Journal of Experimental & Clinical Cancer Research: CR
https://read.qxmd.com/read/32753650/isl2-modulates-angiogenesis-through-transcriptional-regulation-of-angpt2-to-promote-cell-proliferation-and-malignant-transformation-in-oligodendroglioma
#11
JOURNAL ARTICLE
Lin Qi, Zhong-Yong Wang, Xin-Rong Shao, Miao Li, Shu-Na Chen, Xue-Qi Liu, Shi Yan, Bo Zhang, Xu-Dong Zhang, Xin Li, Wenxue Zhao, Ji-An Pan, Bo Zhao, Xing-Ding Zhang
Oligodendroglioma is an important type of lower-grade glioma (LGG), which is a slowly progressing brain tumor. Many LGGs eventually transform into a more aggressive or malignant type. Enhanced angiogenesis is a characteristic of malignantly transformed oligodendroglioma (m-oligodendroglioma). However, the pathogenesis and signaling pathways associated with angiogenesis and proliferation in m-oligodendroglioma are not well understood. In this study, we identified that Insulin Gene Enhancer Protein (ISL2) and its angiogenic capacity were inversely related to survival according to LGG patient data from an online database, and this was further confirmed with pathological LGG patient samples, including malignantly transformed samples, by detecting the expression of ISL2, the angiogenic markers vascular endothelial growth factor (VEGFA) and CD31 and the proliferation marker Ki-67...
September 2020: Oncogene
https://read.qxmd.com/read/30788856/mutation-in-a-flexible-linker-modulates-binding-affinity-for-modular-complexes
#12
JOURNAL ARTICLE
Philippa H Stokes, Neil O Robertson, Ana P G Silva, Tanya Estephan, Jill Trewhella, J Mitchell Guss, Jacqueline M Matthews
Tandem beta zippers are modular complexes formed between repeated linear motifs and tandemly arrayed domains of partner proteins in which β-strands form upon binding. Studies of such complexes, formed by LIM domain proteins and linear motifs in their intrinsically disordered partners, revealed spacer regions between the linear motifs that are relatively flexible but may affect the overall orientation of the binding modules. We demonstrate that mutation of a solvent exposed side chain in the spacer region of an LHX4-ISL2 complex has no significant effect on the structure of the complex, but decreases binding affinity, apparently by increasing flexibility of the linker...
May 2019: Proteins
https://read.qxmd.com/read/29623822/mass-spectrometric-analysis-of-proteins-of-l6-skeletal-muscle-cells-under-different-glucose-conditions-and-vitamin-d-supplementation
#13
JOURNAL ARTICLE
Nancy Taneja, Priyadarshini
BACKGROUND: Type 2 Diabetes (T2D) is a metabolic disease which affects glucose homeostasis caused due to inability of the target cells to respond to insulin. Role of vitamin D in the pathogenesis and prevention of T2D has sparked widespread interest. Vitamin D plays a classical role in Ca++ homeostasis as well as regulates insulin secretion from β-cells and its action on various target cells. Proteins are the vital components of all cellular processes and their expression alters in response to various external or internal stimuli...
2018: Protein and Peptide Letters
https://read.qxmd.com/read/29066954/visual-neurons-in-the-superior-colliculus-innervated-by-islet2-or-islet2-retinal-ganglion-cells-display-distinct-tuning-properties
#14
JOURNAL ARTICLE
Rachel B Kay, Jason W Triplett
Throughout the visual system, different subtypes of neurons are tuned to distinct aspects of the visual scene, establishing parallel circuits. Defining the mechanisms by which such tuning arises has been a long-standing challenge for neuroscience. To investigate this, we have focused on the retina's projection to the superior colliculus (SC), where multiple visual neuron subtypes have been described. The SC receives inputs from a variety of retinal ganglion cell (RGC) subtypes; however, which RGCs drive the tuning of different SC neurons remains unclear...
2017: Frontiers in Neural Circuits
https://read.qxmd.com/read/28473875/genome-wide-dna-methylation-analysis-reveals-loci-that-distinguish-different-types-of-adipose-tissue-in-obese-individuals
#15
JOURNAL ARTICLE
Donia Macartney-Coxson, Miles C Benton, Ray Blick, Richard S Stubbs, Ronald D Hagan, Michael A Langston
BACKGROUND: Epigenetic mechanisms provide an interface between environmental factors and the genome and are known to play a role in complex diseases such as obesity. These mechanisms, including DNA methylation, influence the regulation of development, differentiation and the establishment of cellular identity. Here we employ two approaches to identify differential methylation between two white adipose tissue depots in obese individuals before and after gastric bypass and significant weight loss...
2017: Clinical Epigenetics
https://read.qxmd.com/read/26892722/derivation-of-motor-neuron-like-cells-from-neonatal-mouse-testis-in-a-simple-culture-condition
#16
JOURNAL ARTICLE
S Javanmardy, M H Asadi, M Movahedin, F Moradpour, H Bahadoran
Embryonic stem cell (ESC) therapy is an exciting way to treat neurodegenerative disease and central nervous system injury. However, many ethical and immunological problems surround the use of embryonic stem cells. Finding an alternative source of stem cells is therefore pertinent. In this study, spermatogonia stem cells (SSCs) were used to generate mature motor neurons. SSCs were extracted from neonatal testes and cultured in DMED/F12 medium for 3 weeks. Characterisation of SSC-derived ESC-like cells was confirmed by RT-qPCR, immunostaining, alkaline phosphatase activity and their ability to form embryoid bodies (EBs)...
December 2016: Andrologia
https://read.qxmd.com/read/25935106/genome-wide-association-study-of-recalcitrant-atopic-dermatitis-in-korean-children
#17
JOURNAL ARTICLE
Kyung Won Kim, Rachel A Myers, Ji Hyun Lee, Catherine Igartua, Kyung Eun Lee, Yoon Hee Kim, Eun-Jin Kim, Dankyu Yoon, Joo-Shil Lee, Tomomitsu Hirota, Mayumi Tamari, Atsushi Takahashi, Michiaki Kubo, Je-Min Choi, Kyu-Earn Kim, Dan L Nicolae, Carole Ober, Myung Hyun Sohn
BACKGROUND: Atopic dermatitis (AD) is a heterogeneous chronic inflammatory skin disease. Most AD during infancy resolves during childhood, but moderate-to-severe AD with allergic sensitization is more likely to persist into adulthood and more often occurs with other allergic diseases. OBJECTIVE: We sought to find susceptibility loci by performing the first genome-wide association study (GWAS) of AD in Korean children with recalcitrant AD, which was defined as moderate-to-severe AD with allergic sensitization...
September 2015: Journal of Allergy and Clinical Immunology
https://read.qxmd.com/read/25843547/slit-and-semaphorin-signaling-governed-by-islet-transcription-factors-positions-motor-neuron-somata-within-the-neural-tube
#18
JOURNAL ARTICLE
Hojae Lee, Minkyung Kim, Namhee Kim, Todd Macfarlan, Samuel L Pfaff, Grant S Mastick, Mi-Ryoung Song
Motor neurons send out axons to peripheral muscles while their cell bodies remain in the ventral spinal cord. The unique configuration of motor neurons spanning the border between the CNS and PNS has been explained by structural barriers such as boundary cap (BC) cells, basal lamina and radial glia. However, mechanisms in motor neurons that retain their position have not been addressed yet. Here we demonstrate that the Islet1 (Isl1) and Islet2 (Isl2) transcription factors, which are essential for acquisition of motor neuron identity, also contribute to restrict motor neurons within the neural tube...
July 2015: Experimental Neurology
https://read.qxmd.com/read/25367067/quantitative-assessment-of-computational-models-for-retinotopic-map-formation
#19
JOURNAL ARTICLE
J J Johannes Hjorth, David C Sterratt, Catherine S Cutts, David J Willshaw, Stephen J Eglen
Molecular and activity-based cues acting together are thought to guide retinal axons to their terminal sites in vertebrate optic tectum or superior colliculus (SC) to form an ordered map of connections. The details of mechanisms involved, and the degree to which they might interact, are still not well understood. We have developed a framework within which existing computational models can be assessed in an unbiased and quantitative manner against a set of experimental data curated from the mouse retinocollicular system...
June 2015: Developmental Neurobiology
https://read.qxmd.com/read/24755910/islet1-and-its-co-factor-ldb1-are-expressed-in-quiescent-cells-of-mouse-intestinal-epithelium
#20
JOURNAL ARTICLE
Evgeny Makarev, Marat Gorivodsky
Islet1 belongs to Lim homeobox (Lhx) gene family which encodes transcription factors that have been conserved in evolution. They form complexes with other transcriptional regulators, among them obligatory co-factors encoded by Ldb genes. Isl1 (Islet1), Lhx and Ldb1 genes play a crucial role in organ patterning, cell fate determination and cell differentiation in both embryonic and adult tissues. In this study we analyzed expression pattern of Isl1 and its co-factor Ldb1 in small intestine. We also studied the biological role of Ldb1 in gut endoderm...
2014: PloS One
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