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Functional Classification

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https://www.readbyqxmd.com/read/28231452/proteome-scale-identification-classification-and-structural-analysis-of-iron-binding-proteins-in-bread-wheat
#1
Shailender Kumar Verma, Ankita Sharma, Padmani Sandhu, Neha Choudhary, Shailaja Sharma, Vishal Acharya, Yusuf Akhter
Bread wheat is one of the major staple foods of worldwide population and iron plays a significant role in growth and development of the plant. In this report, we are presenting the genome wide identification of iron-binding proteins in bread wheat. The wheat genome derived putative proteome was screened for identification of iron-binding sequence motifs. Out of 602 putative iron-binding proteins, 130 were able to produce reliable structural models by homology techniques and further analyzed for the presence of iron-binding structural motifs...
February 14, 2017: Journal of Inorganic Biochemistry
https://www.readbyqxmd.com/read/28231063/bone-age-in-unilateral-spastic-cerebral-palsy-is-there-a-correlation-with-hand-function-and-limb-length
#2
Je-Sang Lee, Im Jeong Choi, Myung Jun Shin, Jin-A Yoon, Sung Hwa Ko, Yong Beom Shin
BACKGROUND: The purpose of this study was to analyze the bone age and the upper extremity segmental lengths between the affected and the unaffected side and to reveal the correlation between the difference of bone age and the upper limb length discrepancy in the unilateral spastic cerebral palsy (CP). We also evaluated the relationship between difference of bone age and hand function. METHODS: Seventy-eight patients participated in this study. The bone ages of hand-wrists of the patients were determined by the Greulich and Pyle atlas...
February 23, 2017: Journal of Pediatric Endocrinology & Metabolism: JPEM
https://www.readbyqxmd.com/read/28230818/post-chornobyl-remote-radiation-effects-on-human-sperm-and-seminal-plasma-characteristics
#3
S V Andreychenko, A V Klepko, L V Gorban, O A Motryna, L V Grubska, O V Trofimenko
AIM: The research was aimed on analysis of the remote consequences of Chornobyl accident on the reproductive function of men adult residing in Ukraine. MATERIALS AND METHODS: 232 male volunteers with mean age of 34 years (range 20-47) from 5 different regions of Ukraine (Zhytomyr, Ivano-Frankivsk, Kyiv, Poltava, and Kyiv city) were enrolled in cross-sectional studies of long term radiation effects on seminal plasma and sperm. All manipulations, analysis and classification of ejaculates were done accordingly to WHO recommendations...
December 2016: Experimental Oncology
https://www.readbyqxmd.com/read/28229369/course-outcome-and-complications-in-children-with-systemic-onset-juvenile-idiopathic-arthritis
#4
Mansi Dewoolkar, Rolando Cimaz, Pranav Raman Chickermane, Raju P Khubchandani
OBJECTIVES: To assess the course, outcome and complications in a mono-centric cohort of 53 patients with systemic onset juvenile idiopathic arthritis (s-JIA). METHODS: In an observational study, 53 consecutive patients diagnosed with s-JIA on or before October 2009 were enrolled and followed up between October 2009 and September 2012. At each 6-12 weekly visit, clinical examination, laboratory investigations and details of on-going treatment were recorded. Disease course was classified as monocyclic, intermittent and persistent...
February 23, 2017: Indian Journal of Pediatrics
https://www.readbyqxmd.com/read/28228764/de-novo-transcriptome-assembly-of-chinese-kale-and-global-expression-analysis-of-genes-involved-in-glucosinolate-metabolism-in-multiple-tissues
#5
Shuanghua Wu, Jianjun Lei, Guoju Chen, Hancai Chen, Bihao Cao, Changming Chen
Chinese kale, a vegetable of the cruciferous family, is a popular crop in southern China and Southeast Asia due to its high glucosinolate content and nutritional qualities. However, there is little research on the molecular genetics and genes involved in glucosinolate metabolism and its regulation in Chinese kale. In this study, we sequenced and characterized the transcriptomes and expression profiles of genes expressed in 11 tissues of Chinese kale. A total of 216 million 150-bp clean reads were generated using RNA-sequencing technology...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28228346/functional-range-of-motion-of-the-hand-joints-in-activities-of-the-international-classification-of-functioning-disability-and-health
#6
Verónica Gracia-Ibáñez, Margarita Vergara, Joaquín L Sancho-Bru, Marta C Mora, Catalina Piqueras
STUDY DESIGN: Cross-sectional research design. INTRODUCTION: Active range of motion (AROM) is used as indicator of hand function. However, functional range of motion (FROM) data are limited, and fail to represent activities of daily living (ADL). PURPOSE OF THE STUDY: To estimate dominant hand FROM in flexion, abduction and palmar arching in people under 50 years of age performing ADL. METHODS: AROMs and hand postures in 24 representative ADL of the International Classification of Functioning, Disability and Health (ICF) were recorded in 12 men and 12 women...
February 19, 2017: Journal of Hand Therapy: Official Journal of the American Society of Hand Therapists
https://www.readbyqxmd.com/read/28228100/influence-of-hooks-and-a-lag-screw-on-internal-fixation-plates-for-lateral-malleolar-fracture-a-biomechanical-and-ergonomic-study
#7
Rina Sakai, Masataka Uchino, Terumasa Yoneo, Yasuaki Ohtaki, Hiroaki Minehara, Terumasa Matsuura, Tsutomu Gomi, Masanobu Ujihira
BACKGROUND: For internal fixation of AO classification Type B lateral malleolar fracture, insertion of lag screws into the fracture plane and fixation with a one-third tubular plate as a neutralization plate are the standard treatment procedures. The one-third tubular plate is processed to a hook shape and hung on the distal end of the fibula. In this study, to compare the function of the hook and lag screws of a one-third tubular plate and LCP for osteosynthesis of lateral malleolar fracture, mechanical indices of internal fixation were compared among the one-third tubular plates with lag screws with and without the hook and a locking compression plate...
February 23, 2017: Journal of Orthopaedic Surgery and Research
https://www.readbyqxmd.com/read/28227932/influence-of-embedding-dimension-on-distribution-entropy-in-analyzing-heart-rate-variability
#8
Radhagayathri K Udhayakumar, Chandan Karmakar, Peng Li, Marimuthu Palaniswami, Radhagayathri K Udhayakumar, Chandan Karmakar, Peng Li, Marimuthu Palaniswami, Marimuthu Palaniswami, Radhagayathri K Udhayakumar, Peng Li, Chandan Karmakar
Distribution entropy (DistEn) is a recent measure of complexity that is used to analyze Heart Rate Variability (HRV) data. DistEn which is a function of data length N, number of bins M and embedding dimension m is known to be stable and consistent with respect to parameters N and M respectively. Also, (N, M) are known to have a combined effect in deciding performance of DistEn as a classification feature. But, all such analysis have mostly ignored the influence of the third parameter m on DistEn properties...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227825/real-time-autonomous-bladder-event-classification-and-closed-loop-control-from-single-channel-pressure-data
#9
Robert Karam, Swarup Bhunia, Steve Majerus, Steven W Brose, Margot S Damaser, Dennis Bourbeau, Robert Karam, Swarup Bhunia, Steve Majerus, Steven W Brose, Margot S Damaser, Dennis Bourbeau, Steve Majerus, Margot S Damaser, Robert Karam, Steven W Brose, Dennis Bourbeau, Swarup Bhunia
Urinary incontinence, or the loss of bladder control, is a debilitating condition affecting millions worldwide, which significantly reduces quality of life. Neuromodulation of lower urinary tract nerves can be used to treat sensations of urgency in many subjects, including those with Spinal Cord Injury (SCI). Event driven, or conditional stimulation has been investigated as a possible improvement to the state-of-the-art open-loop stimulation systems available today. However, this requires a robust, adaptive, and noise-tolerant method of classifying bladder function from real-time bladder pressure measurements...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227678/illumination-and-device-independence-for-colorimetric-detection-of-urinary-biomarkers-with-smartphone
#10
Haakon Karisen, Tao Dong, Haakon Karisen, Tao Dong, Tao Dong
Diaper wearing elderly with functional impairments and/or incontinence is at high risk of contracting urinary tract infections. Nurses struggle with collection of urine samples for analysis. Therefore, a smartphone application is under development as a rapid screening device to work in conjunction with a colorimetric diaper assay that collects and tests urine within a diaper. The focus of this work is to make a practical and useful tool that medical personnel (the user) can use for rapid screening on patients in the field, only with a smartphone and assay available...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227627/computation-offloading-for-real-time-health-monitoring-devices
#11
Haik Kalantarian, Costas Sideris, Tuan Le, Anahita Hosseini, Majid Sarrafzadeh, Haik Kalantarian, Costas Sideris, Tuan Le, Anahita Hosseini, Majid Sarrafzadeh, Costas Sideris, Majid Sarrafzadeh, Anahita Hosseini, Tuan Le, Haik Kalantarian
Among the major challenges in the development of real-time wearable health monitoring systems is to optimize battery life. One of the major techniques with which this objective can be achieved is computation offloading, in which portions of computation can be partitioned between the device and other resources such as a server or cloud. In this paper, we describe a novel dynamic computation offloading scheme for real-time wearable health monitoring devices that adjusts the partitioning of data between the wearable device and mobile application as a function of desired classification accuracy...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227412/development-of-a-real-time-lumbar-ultrasound-image-processing-system-for-epidural-needle-entry-site-localization
#12
Yusong Leng, Shuang Yu, Kok Kiong Tan, Philip Tildsley, Alex Tiong Heng Sia, Ban Leong Sng, Yusong Leng, Shuang Yu, Kok Kiong Tan, Philip Tildsley, Alex Tiong Heng Sia, Ban Leong Sng, Yusong Leng, Shuang Yu, Philip Tildsley, Ban Leong Sng, Kok Kiong Tan
A fully-automatic ultrasound image processing system that can determine the needle entry site for epidural anesthesia (EA) in real time is presented in this paper. Neither the knowledge of anesthetists nor additional hardware is required to operate the system, which firstly directs the anesthetists to reach the desired insertion region in the longitudinal view, i.e., lumbar level L3-L4, and then locates the ideal puncture site by instructing the anesthetists to rotate and slightly adjust the position of ultrasound probe...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227355/automatic-recognition-of-pertrochanteric-bone-fractures-in-femur-using-level-sets
#13
Ling Wang, Hong Cheng, Hai Lan, Yingjie Zheng, Kainan Li, Ling Wang, Hong Cheng, Hai Lan, Yingjie Zheng, Kainan Li, Ling Wang, Yingjie Zheng, Hong Cheng, Hai Lan, Kainan Li
Femur fracture is one of the common diseases in the elderly. In this paper, an automatic and efficient classification method of femoral pertrochanteric fractures is proposed based on image segmentation techniques. The types of femoral pertrochanteric fracture are defined firstly according to the difference of fracture parts. To reduce the computational complexity, only four directions images are used in each 3D femur, i.e. the anterior, the anterolateral, the posterior and the posterolateral images of a femur...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227336/assessment-of-mental-workload-by-eeg-fnirs
#14
Haleh Aghajani, Ahmet Omurtag, Haleh Aghajani, Ahmet Omurtag, Ahmet Omurtag, Haleh Aghajani
We investigated the use of a multimodal functional neuroimaging system in quantifying mental workload of healthy human volunteers. We recorded behavioral performance measures as well as electroencephalography (EEG) and functional near-infrared spectroscopy (fNIRS) simultaneously from subjects performing n-back tasks. The EEG and fNIRS signals were used in feature generation and classification offline using support vector machines. We examined the classification accuracy of three distinct systems: EEG based; fNIRS based; and Hybrid, which contained features from the first two systems as based on their interactions...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227295/classification-of-obsessive-compulsive-disorder-from-resting-state-fmri
#15
Bhaskar Sen, Gail A Bernstein, Tingting Xu, Bryon A Mueller, Mindy W Schreiner, Kathryn R Cullen, Keshab K Parhi, Bhaskar Sen, Gail A Bernstein, Tingting Xu, Bryon A Mueller, Mindy W Schreiner, Kathryn R Cullen, Keshab K Parhi, Keshab K Parhi, Gail A Bernstein, Tingting Xu, Kathryn R Cullen, Bryon A Mueller, Mindy W Schreiner, Bhaskar Sen
Obssesive-compulsive disorder (OCD) is a serious mental illness that affects the overall quality of the patients' daily lives. Accurate diagnosis of this disorder is a primary step towards effective treatment. Diagnosing OCD is a lengthy procedure that involves interviews, symptom rating scales and behavioral observation as well as the experience of a clinician. Discovering signal processing and network based biomarkers from functional magnetic resonance scans of patients may greatly assist the clinicians in their diagnostic assessments...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227285/non-contact-real-time-estimation-of-intrapulmonary-pressure-and-tidal-volume-for-chronic-heart-failure-patients
#16
Vinh Phuc Tran, Adel Ali Al-Jumaily, Vinh Phuc Tran, Adel Ali Al-Jumaily, Vinh Phuc Tran, Adel Ali Al-Jumaily
Long-term continuous patient monitoring is required in many health systems for monitoring and analytical diagnosing purposes. It has been recognized that these types of monitoring systems have shortcomings related to patient comfort and/or functionality. Non-contact monitoring systems have been developed to address some of these shortcomings. One of such systems is non-contact physiological vital signs assessments for Chronic Heart Failure (CHF) patients. This paper presents a novel pulmonary ventilation model that defines the relationship between the intrapulmonary pressure and the chest displacement...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227273/body-position-classification-for-cardiorespiratory-measurement
#17
Marcel Mlynczak, Martin Berka, Wiktor Niewiadomski, Gerard Cybulski, Marcel Mlynczak, Martin Berka, Wiktor Niewiadomski, Gerard Cybulski, Marcel Mlynczak, Martin Berka, Gerard Cybulski, Wiktor Niewiadomski
Heart activity, or at least heart rate variability, is associated with body position. Our previous studies have confirmed that impedance pneumography may be used to record respiratory function, but the calibration coefficients for this method depend on position. Data were collected from 24 students (12 male, 12 female), who alternated positions between lying (on front, back, and right side), sitting and standing. Signals from an attached iPhone's internal sensors (accelerometer, gyroscope, magnetometer) were recorded and attitude relative to gravity was calculated...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227171/structural-classification-of-protein-sequences-based-on-signal-processing-and-support-vector-machines
#18
Charalambos Chrysostomou, Huseyin Seker, Charalambos Chrysostomou, Huseyin Seker, Huseyin Seker, Charalambos Chrysostomou
The function of any protein depends directly on its secondary and tertiary structure. Proteins can fold into a three-dimensional shape, which is primarily depended on the arrangement of amino acids in the primary structure. In recent years, with the explosive sequencing of proteins, it is unfeasible to perform detailed experimental studies, as these methodologies are very expensive and time consuming. This leaves the structure of the majority of currently available protein sequences unknown. In this paper, a predictive model is therefore presented for the classification of protein sequence's secondary structures, namely alpha helix and beta sheet...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227167/unsupervised-selection-of-rv144-hiv-vaccine-induced-antibody-features-correlated-to-natural-killer-cell-mediated-cytotoxic-reactions
#19
Ferdi Sarac, Volkan Uslan, Huseyin Seker, Ahmed Bouridane, Ferdi Sarac, Volkan Uslan, Huseyin Seker, Ahmed Bouridane, Ferdi Sarac, Huseyin Seker, Ahmed Bouridane, Volkan Uslan
HIV-1 vaccine injection has been shown less effective due to the diversity of antigens. Increasing the knowledge of the associations between immune system and virus would ultimately result in producing effective vaccines against HIV-1 virus. To increase the understanding of immunological information, computational models can be utilised to construct predictive models. The aim of this study is, therefore, to predict the effect of antibody features (IgGs) and primary Natural Killing (NK) cells' cytotoxic activities on RV144 vaccine recipients and to disclose the functional relationship between immune system and HIV virus...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227076/analysis-of-blood-pressure-signal-in-patients-with-different-ventricular-ejection-fraction-using-linear-and-non-linear-methods
#20
Andres Arcentales, Patricio Rivera, Pere Caminal, Andreas Voss, Antonio Bayes-Genis, Beatriz F Giraldo, Andres Arcentales, Patricio Rivera, Pere Caminal, Andreas Voss, Antonio Bayes-Genis, Beatriz F Giraldo, Pere Caminal, Antonio Bayes-Genis, Andres Arcentales, Patricio Rivera, Beatriz F Giraldo, Andreas Voss
Changes in the left ventricle function produce alternans in the hemodynamic and electric behavior of the cardiovascular system. A total of 49 cardiomyopathy patients have been studied based on the blood pressure signal (BP), and were classified according to the left ventricular ejection fraction (LVEF) in low risk (LR: LVEF>35%, 17 patients) and high risk (HR: LVEF≤35, 32 patients) groups. We propose to characterize these patients using a linear and a nonlinear methods, based on the spectral estimation and the recurrence plot, respectively...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
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