keyword
https://read.qxmd.com/read/38629131/melastomatraits-1-0-a-database-of-functional-traits-in-melastomataceae-a-large-pantropical-angiosperm-family
#21
JOURNAL ARTICLE
Marcelo Reginato, Carlos A Ordónez-Parra, João Vitor S Messeder, Vinicius L G Brito, Agnes Dellinger, Ricardo Kriebel, Camilla Marra, Lilian Melo, Tatiana Cornelissen, Lisieux Fuzessy, Patricia Sperotto, Manuela Calderón-Hernández, Tadeu J Guerra, Constantin Kopper, Carolina Mancipe-Murillo, Marco A Pizo, Juan Mauricio Posada-Herrera, Érica Hasui, Wesley R Silva, Fernando A O Silveira
The recent availability of open-access repositories of functional traits has revolutionized trait-based approaches in ecology and evolution. Nevertheless, the underrepresentation of tropical regions and lineages remains a pervasive bias in plant functional trait databases, which constrains large-scale assessments of plant ecology, evolution, and biogeography. Here, we present MelastomaTRAITs 1.0, a comprehensive and updatable database of functional traits for the pantropical Melastomataceae, the ninth-largest angiosperm family with 177 genera and more than 5800 species...
April 17, 2024: Ecology
https://read.qxmd.com/read/38627596/a-spatiotemporal-atlas-of-cholestatic-injury-and-repair-in-mice
#22
JOURNAL ARTICLE
Baihua Wu, Xinyi Shentu, Haitao Nan, Pengcheng Guo, Shijie Hao, Jiangshan Xu, Shuncheng Shangguan, Lei Cui, Jin Cen, Qiuting Deng, Yan Wu, Chang Liu, Yumo Song, Xiumei Lin, Zhifeng Wang, Yue Yuan, Wen Ma, Ronghai Li, Yikang Li, Qiwei Qian, Wensi Du, Tingting Lai, Tao Yang, Chuanyu Liu, Xiong Ma, Ao Chen, Xun Xu, Yiwei Lai, Longqi Liu, Miguel A Esteban, Lijian Hui
Cholestatic liver injuries, characterized by regional damage around the bile ductular region, lack curative therapies and cause considerable mortality. Here we generated a high-definition spatiotemporal atlas of gene expression during cholestatic injury and repair in mice by integrating spatial enhanced resolution omics sequencing and single-cell transcriptomics. Spatiotemporal analyses revealed a key role of cholangiocyte-driven signaling correlating with the periportal damage-repair response. Cholangiocytes express genes related to recruitment and differentiation of lipid-associated macrophages, which generate feedback signals enhancing ductular reaction...
April 16, 2024: Nature Genetics
https://read.qxmd.com/read/38625747/the-estrogen-signaling-pathway-reprograms-prostate-cancer-cell-metabolism-and-supports-proliferation-and-disease-progression
#23
JOURNAL ARTICLE
Camille Lafront, Lucas Germain, Gabriel H Campolina-Silva, Cindy Weidmann, Line Berthiaume, Hélène Hovington, Hervé Brisson, Cynthia Jobin, Lilianne Frégeau-Proulx, Raul Cotau, Kevin Gonthier, Aurélie Lacouture, Patrick Caron, Claire Ménard, Chantal Atallah, Julie Riopel, Éva Latulippe, Alain Bergeron, Paul Toren, Chantal Guillemette, Martin Pelletier, Yves Fradet, Clémence Belleannée, Frédéric Pouliot, Louis Lacombe, Éric Lévesque, Étienne Audet-Walsh
Just as the androgen receptor (AR), the estrogen receptor α (ERα) is expressed in the prostate and is thought to influence prostate cancer (PCa) biology. Yet, the incomplete understanding of ERα functions in PCa hinders our ability to fully comprehend its clinical relevance and restricts the repurposing of estrogen-targeted therapies for the treatment of this disease. Using two human PCa tissue microarray cohorts, we first demonstrated that nuclear ERα expression was heterogeneous among patients, being only detected in half of tumors...
April 16, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38625148/chemically-recyclable-high-molar-mass-polyoxazolidinones-via-ring-opening-metathesis-polymerization
#24
JOURNAL ARTICLE
Arpan Pal, Allison R Wong, Jessica R Lamb
The development of robust methods for the synthesis of chemically recyclable polymers with tunable properties is necessary for the design of next-generation materials. Polyoxazolidinones (POxa), polymers with five-membered urethanes in their backbones, are an attractive target because they are strongly polar and have high thermal stability, but existing step-growth syntheses limit molar masses and methods to chemically recycle POxa to monomer are rare. Herein, we report the synthesis of high molar mass POxa via ring-opening metathesis polymerization of oxazolidinone-fused cyclooctenes...
April 16, 2024: ACS Macro Letters
https://read.qxmd.com/read/38624208/the-hippo-kinases-control-inflammatory-hippo-signaling-and-restrict-bacterial-infection-in-phagocytes
#25
JOURNAL ARTICLE
Brendyn M St Louis, Sydney M Quagliato, Yu-Ting Su, Gregory Dyson, Pei-Chung Lee
UNLABELLED: The Hippo kinases MST1 and MST2 initiate a highly conserved signaling cascade called the Hippo pathway that limits organ size and tumor formation in animals. Intriguingly, pathogens hijack this host pathway during infection, but the role of MST1/2 in innate immune cells against pathogens is unclear. In this report, we generated Mst1/2 knockout macrophages to investigate the regulatory activities of the Hippo kinases in immunity. Transcriptomic analyses identified differentially expressed genes (DEGs) regulated by MST1/2 that are enriched in biological pathways, such as systemic lupus erythematosus, tuberculosis, and apoptosis...
April 16, 2024: MBio
https://read.qxmd.com/read/38624196/warming-alters-life-history-traits-and-competition-in-a-phage-community
#26
JOURNAL ARTICLE
Samuel T E Greenrod, Daniel Cazares, Serena Johnson, Tobias E Hector, Emily J Stevens, R Craig MacLean, Kayla C King
Host-parasite interactions are highly susceptible to changes in temperature due to mismatches in species thermal responses. In nature, parasites often exist in communities, and responses to temperature are expected to vary between host-parasite pairs. Temperature change thus has consequences for both host-parasite dynamics and parasite-parasite interactions. Here, we investigate the impact of warming (37°C, 40°C, and 42°C) on parasite life-history traits and competition using the opportunistic bacterial pathogen Pseudomonas aeruginosa (host) and a panel of three genetically diverse lytic bacteriophages (parasites)...
April 16, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38622114/sm-like-protein-rof-inhibits-transcription-termination-factor-%C3%AF-by-binding-site-obstruction-and-conformational-insulation
#27
JOURNAL ARTICLE
Nelly Said, Mark Finazzo, Tarek Hilal, Bing Wang, Tim Luca Selinger, Daniela Gjorgjevikj, Irina Artsimovitch, Markus C Wahl
Transcription termination factor ρ is a hexameric, RNA-dependent NTPase that can adopt active closed-ring and inactive open-ring conformations. The Sm-like protein Rof, a homolog of the RNA chaperone Hfq, inhibits ρ-dependent termination in vivo but recapitulation of this activity in vitro has proven difficult and the precise mode of Rof action is presently unknown. Here, our cryo-EM structures of ρ-Rof and ρ-RNA complexes show that Rof undergoes pronounced conformational changes to bind ρ at the protomer interfaces, undercutting ρ conformational dynamics associated with ring closure and occluding extended primary RNA-binding sites that are also part of interfaces between ρ and RNA polymerase...
April 15, 2024: Nature Communications
https://read.qxmd.com/read/38621932/-morphological-study-of-sexual-reproductive-disorders-in-ligusticum-chuanxiong
#28
JOURNAL ARTICLE
Jin-Niu Xing, Min Shuai, Ya-Ping DU, Wei-Ping Gao, Meng-Yao Shu, Gui-Qi Han, Xin Chen, Dong-Mei He, Chuan Zheng
Chuanxiong Rhizoma is a well-known Sichuan-specific herbal medicine. Its original plant, Ligusticum chuanxiong, has been cultivated asexually for a long time. L. chuanxiong has sexual reproductive disorders, which restricts its germplasm innovation. However, there is little research on the reproductive system of L. chuanxiong. This study is based on a comparative anatomical research approach, using morphological dissection, paraffin sectioning, staining and compression, and combined with scanning electron microscopy technology, to observe and compare the flowers, fruits, and seeds at various stages of reproductive growth of L...
March 2024: Zhongguo Zhong Yao za Zhi, Zhongguo Zhongyao Zazhi, China Journal of Chinese Materia Medica
https://read.qxmd.com/read/38621748/tumor-organoids-the-era-of-personalized-medicine
#29
REVIEW
Natalia V Rassomakhina, Alexandra Yu Ryazanova, Astemir R Likhov, Sergey A Bruskin, Liliya G Maloshenok, Victoria V Zherdeva
The strategies of future medicine are aimed to modernize and integrate quality approaches including early molecular-genetic profiling, identification of new therapeutic targets and adapting design for clinical trials, personalized drug screening (PDS) to help predict and individualize patient treatment regimens. In the past decade, organoid models have emerged as an innovative in vitro platform with the potential to realize the concept of patient-centered medicine. Organoids are spatially restricted three-dimensional clusters of cells ex vivo that self-organize into complex functional structures through genetically programmed determination, which is crucial for reconstructing the architecture of the primary tissue and organs...
January 2024: Biochemistry. Biokhimii︠a︡
https://read.qxmd.com/read/38619323/chd4-and-smyd1-repress-common-transcriptional-programs-in-the-developing-heart
#30
JOURNAL ARTICLE
Wei Shi, Lauren K Wasson, Kerry M Dorr, Zachary L Robbe, Caralynn M Wilczewski, Austin J Hepperla, Ian J Davis, Christine E Seidman, Jonathan G Seidman, Frank L Conlon
Regulation of chromatin states is essential for proper temporal and spatial gene expression. Chromatin states are modulated by remodeling complexes composed of components that have enzymatic activities. CHD4 is the catalytic core of the Nucleosome Remodeling and Deacetylase (NuRD) complex that represses gene transcription. However, it remains to be determined how CHD4, a ubiquitous enzyme that remodels chromatin structure, functions in cardiomyocytes to maintain heart development. Particularly, there exists controversy as to whether other proteins besides the NuRD components interact with CHD4 in the heart...
April 15, 2024: Development
https://read.qxmd.com/read/38618843/-caught-in-each-other-s-traps-factors-perpetuating-incentive-linked-prescribing-deals-between-physicians-and-the-pharmaceutical-industry
#31
JOURNAL ARTICLE
Mishal Sameer Khan, Afifah Rahman-Shepherd, Muhammad Naveed Noor, Amna Rehana Siddiqui, Catherine Goodman, Virginia Wiseman, Afshan Khurshid Isani, Wafa Aftab, Sabeen Sharif, Sadia Shakoor, Sameen Siddiqi, Rumina Hasan
BACKGROUND: Despite known adverse impacts on patients and health systems, 'incentive-linked prescribing', which describes the prescribing of medicines that result in personal benefits for the prescriber, remains a widespread and hidden impediment to quality of healthcare. We investigated factors perpetuating incentive-linked prescribing among primary care physicians in for-profit practices (referred to as private doctors), using Pakistan as a case study. METHODS: Our mixed-methods study synthesised insights from a survey of 419 systematically samples private doctors and 68 semi-structured interviews with private doctors (n=28), pharmaceutical sales representatives (n=12), and provincial and national policy actors (n=28)...
March 17, 2024: International Journal of Health Policy and Management
https://read.qxmd.com/read/38618261/an-association-between-gas5-rs145204276-neat1-rs512715-and-meg3-rs4081134-gene-polymorphisms-and-papillary-thyroid-carcinoma
#32
JOURNAL ARTICLE
Marjan Abdi Pastaki, Saeedeh Salimi, Zahra Heidari, Mohsen Saravani
BACKGROUND: This study explores the association between growth arrest-specific 5 (GAS5) rs145204276, nuclear paraspeckle assembly transcript 1 (NEAT1) rs512715, and Maternally Expressed 3 (MEG3) rs4081134 polymorphisms and their impact on susceptibility to papillary thyroid carcinoma (PTC), considering differential expression of long noncoding RNAs (lncRNAs) in PTC. METHODS: A case-control study involving 125 papillary thyroid carcinoma (PTC) patients and 125 controls was conducted...
October 2023: Reports of Biochemistry & Molecular Biology
https://read.qxmd.com/read/38617824/planning-and-implementing-genetic-rescue-of-an-endangered-freshwater-fish-population-in-a-regulated-river-where-low-flow-reduces-breeding-opportunities-and-may-trigger-inbreeding-depression
#33
JOURNAL ARTICLE
Alexandra Pavlova, Nadja M Schneller, Mark Lintermans, Matt Beitzel, Diana A Robledo-Ruiz, Paul Sunnucks
Augmenting depleted genetic diversity can improve the fitness and evolutionary potential of wildlife populations, but developing effective management approaches requires genetically monitored test cases. One such case is the small, isolated and inbred Cotter River population of an endangered Australian freshwater fish, the Macquarie perch Macquaria australasica , which over 3 years (2017-2019) received 71 translocated migrants from a closely related, genetically more diverse population. We used genetic monitoring to test whether immigrants bred, interbred with local fish and augmented population genetic diversity...
April 2024: Evolutionary Applications
https://read.qxmd.com/read/38617241/regulation-of-fatty-acid-delivery-to-metastases-by-tumor-endothelium
#34
Deanna N Edwards, Shan Wang, Wenqiang Song, Laura C Kim, Verra M Ngwa, Yoonha Hwang, Kevin C Ess, Mark R Boothby, Jin Chen
Tumor metastasis, the main cause of death in cancer patients, requires outgrowth of tumor cells after their dissemination and residence in microscopic niches. Nutrient sufficiency is a determinant of such outgrowth 1 . Fatty acids (FA) can be metabolized by cancer cells for their energetic and anabolic needs but impair the cytotoxicity of T cells in the tumor microenvironment (TME) 2, 3 , thereby supporting metastatic progression. However, despite the important role of FA in metastatic outgrowth, the regulation of intratumoral FA is poorly understood...
April 3, 2024: bioRxiv
https://read.qxmd.com/read/38616539/longitudinal-changes-in-refractive-development-in-highly-hyperopic-children-a-2-6-11-2-year-follow-up-of-preschoolers-diagnosed-with-high-hyperopia
#35
JOURNAL ARTICLE
Ling Sun, Xiaoli Qi, Linlin Song, Yuxian Ning, Xiaoyu Zeng, Gang Ding, Xue Li, Jing Li, Nan Wei, Ning Hua, Xuehan Qian
PURPOSE: This study aims to elucidate the longitudinal refractive and ocular biometric alterations in preschool children with high hyperopia who underwent early interventions. METHODS: We conducted a retrospective analysis of preschool children diagnosed with high hyperopia at Tianjin Medical University Eye Hospital between 2011 and 2023. Inclusion criteria required an initial examination with cycloplegic refraction, bilateral spherical equivalent power (SE) ≥ +5...
April 14, 2024: Current Eye Research
https://read.qxmd.com/read/38616332/the-role-of-lipoylation-in-mitochondrial-adaptation-to-methionine-restriction
#36
JOURNAL ARTICLE
Jingyuan Xue, Cunqi Ye
Dietary methionine restriction (MR) is associated with a spectrum of health-promoting benefits. Being conducive to prevention of chronic diseases and extension of life span, MR can activate integrated responses at metabolic, transcriptional, and physiological levels. However, how the mitochondria of MR influence metabolic phenotypes remains elusive. Here, we provide a summary of cellular functions of methionine metabolism and an overview of the current understanding of effector mechanisms of MR, with a focus on the aspect of mitochondria-mediated responses...
April 14, 2024: BioEssays: News and Reviews in Molecular, Cellular and Developmental Biology
https://read.qxmd.com/read/38615915/size-and-multiplicity-of-placental-lakes-on-20-week-fetal-anatomy-ultrasound-and-obstetrical-outcomes
#37
JOURNAL ARTICLE
Nathan A Keller, Insaf Kouba, Dimitre G Stefanov, Frank I Jackson, Sanaa Mansoor, Samantha P Aloysius, Tadhg O'Sullivan-Bakshi, Barrington Mccalla, Luis A Bracero, Matthew J Blitz
Our objective was to determine if placental lake presence or size are associated with adverse pregnancy outcomes. This was a retrospective cohort of patients who had fetal anatomy ultrasounds at 18-22 weeks and delivered between 2018 and 2022. Placental lakes were classified as small (>2.0-3.9 cm) or large (>4 cm). Multiple gestations, placenta previas, and placenta accretas were excluded. Outcomes included low birthweight, cesarean delivery, primary cesarean for non-reassuring fetal heart tracing, fetal growth restriction, preterm birth, and severe preeclampsia...
April 12, 2024: Journal of Obstetrics and Gynaecology Canada: JOGC
https://read.qxmd.com/read/38615553/differential-expression-of-ppp1r12a-transcripts-including-those-harbouring-alternatively-spliced-micro-exons-in-placentae-from-complicated-pregnancies
#38
JOURNAL ARTICLE
Edward Frew, Rebecca Sainty, Louise Chappell-Maor, Caitlin Bone, Dagne Daskeviciute, Sarah Russell, Claudia Buhigas, Isabel Iglesias-Platas, Jon Lartey, David Monk
INTRODUCTION: Placenta-associated pregnancy complications, including pre-eclampsia (PE) and intrauterine growth restriction (IUGR) are conditions postulated to originate from initial failure of placentation, leading to clinical sequelae indicative of endothelial dysfunction. Vascular smooth muscle aberrations have also been implicated in the pathogenesis of both disorders via smooth muscle contractility and relaxation mediated by Myosin Light Chain Phosphatase (MLCP) and the oppositional contractile action of Myosin Light Chain Kinase...
April 9, 2024: Placenta
https://read.qxmd.com/read/38615225/maternal-risk-factors-associated-with-preterm-birth-a-case-control-study
#39
JOURNAL ARTICLE
Sonam Gyamtsho, Karma Tenzin, Tshering Choeda
BACKGROUND: Preterm birth is the child birth before 37 completed weeks .Prematurity is one of the leading causes of neonatal morbidity and mortality due to the complications associated with it. The objective of the study was to determine the maternal risk factors associated with all preterm birth in singleton pregnancy at National hospital. METHODS: Hospital based unmatched case control study was conducted between March 2021 to December 2021 at National hospital, Thimphu, Bhutan...
March 22, 2024: Journal of Nepal Health Research Council
https://read.qxmd.com/read/38615125/multidisciplinary-evidence-based-tools-for-improving-consistency-of-care-and-neonatal-nutrition
#40
JOURNAL ARTICLE
Mindy Morris, Stacie Bennett, Liz Drake, Maria C Hetherton, Robin Clifton-Koeppel, Holly Schroeder, Courtney Breault, Kimberly Larson
BACKGROUND: Extrauterine growth restriction from inadequate nutrition remains a significant morbidity in very low birth weight infants. Participants in the California Perinatal Quality Care Collaborative Quality Improvement Collaborative, Grow, Babies, Grow! developed or refined tools to improve nutrition and reduce practice variation. METHOD: Five Neonatal Intensive Care Units describe the development and implementation of nutrition tools. Tools include Parenteral Nutrition Guidelines, Automated Feeding Protocol, electronic medical record Order Set, Nutrition Time-Out Rounding Tool, and a Discharge Nutrition Recommendations...
April 13, 2024: Journal of Perinatology: Official Journal of the California Perinatal Association
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