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Adventitious root*

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https://www.readbyqxmd.com/read/28086804/comparative-analysis-of-the-root-transcriptomes-of-cultivated-sweetpotato-ipomoea-batatas-l-lam-and-its-wild-ancestor-ipomoea-trifida-kunth-g-don
#1
Sathish K Ponniah, Jyothi Thimmapuram, Ketaki Bhide, Venu Kal Kalavacharla, Muthusamy Manoharan
BACKGROUND: The complex process of formation of storage roots (SRs) from adventitious roots affects sweetpotato yield. Identifying the genes that are uniquely expressed in the SR forming cultivated species, Ipomoea batatas (Ib), and its immediate ancestral species, Ipomoea trifida (It), which does not form SRs, may provide insights into the molecular mechanisms underlying SR formation in sweetpotato. RESULTS: Illumina paired-end sequencing generated ~208 and ~200 million reads for Ib and It, respectively...
January 13, 2017: BMC Plant Biology
https://www.readbyqxmd.com/read/28064248/mir393-mediated-auxin-signaling-regulation-is-involved-in-root-elongation-inhibition-in-response-to-toxic-aluminum-stress-in-barley
#2
Bin Bai, Hongwu Bian, Zhanghui Zeng, Ning Hou, Bo Shi, Junhui Wang, Muyuan Zhu, Ning Han
High-throughput small RNA sequencing has identified several potential aluminum (Al)-responsive microRNAs (miRNAs); however, their regulatory role remains unknown. Here, we identified two miR393 family members in barley, and confirmed two target genes-HvTIR1 and HvAFB-through a modified form of 5'-RACE (rapid amplification of cDNA ends) as well as degradome data analysis. Furthermore, we investigated the biological function of the miR393/target module in root development and its Al stress response. The investigation showed that miR393 affected root growth and adventitious root number by altering auxin sensitivity...
January 7, 2017: Plant & Cell Physiology
https://www.readbyqxmd.com/read/28000512/developmental-role-of-phenylalanine-ammonia-lyase-pal-and-cinnamate-4-hydroxylase-c4h-genes-during-adventitious-rooting-of-juglans-regia-l-microshoots
#3
Monireh Cheniany, Ali Ganjeali
Phenylalanine-ammonia-lyase and cinnamate-4-hydroxylase play important role in the phenylpropanoid pathway, which produces many biologically important secondary metabolites participating in normal plant development. Flavonol quercetin is the main representant of these compounds that has been identified in numerous Juglans spp. In this survey, the developmental expression patterns of PAL and C4H genes during in vitro rooting of two walnut cultivars 'Sunland' and 'Howard' was examined by RT-PCR. To understand the potential role in rooting, the changing pattern of endogenous content of quercetin was also analyzed by HPLC...
December 2016: Acta Biologica Hungarica
https://www.readbyqxmd.com/read/27988808/inheritance-and-quantitative-trail-loci-mapping-of-adventitious-root-numbers-in-cucumber-seedlings-under-waterlogging-conditions
#4
Xuewen Xu, Jing Ji, Qiang Xu, Xiaohua Qi, Xuehao Chen
The hypocotyl-derived adventitious root (AR) is an important morphological acclimation to waterlogging stress; however, its genetic basis has not been adequately understood. In the present study, a mixed major gene plus polygene inheritance model was used to analyze AR numbers (ARN) 7 days after waterlogging treatment in six generations (P1, P2, F1, B1, B2, and F2), using cucumber waterlogging tolerant line Zaoer-N and sensitive Pepino as parents. The results showed that the genetic model D-4, mixed one negative dominance major gene and additive-dominance polygenes, is the best-fitting genetic model for waterlogging-triggered ARN phenotype...
December 17, 2016: Molecular Genetics and Genomics: MGG
https://www.readbyqxmd.com/read/27925006/cryopreservation-of-adventitious-roots-of-cleome-rosea-vahl-cleomaceae-using-a-vitrification-technique-and-assessment-of-genetic-stability
#5
L Da Silva Cordeiro, C Simoes-Gurgel, N Albarello
BACKGROUND:  Cleome rosea, a Brazilian native species, has medicinal potential. Previously a cryopreservation protocol for in vitro roots using the vitrification solution PVS2 has been developed. However, the genetic stability of the cryopreserved material is yet to be assessed. OBJECTIVES: To evaluate the effects of loading and vitrification solutions (PVS2 and PVS3) on post-cryopreservation recovery of C. rosea roots, and to assess their genetic stability using Random Amplified Polymorphic DNA (RAPD) markers...
July 2016: Cryo Letters
https://www.readbyqxmd.com/read/27924132/efficient-in-vitro-propagation-of-artemisia-nilagirica-var-nilagirica-indian-wormwood-and-assessment-of-genetic-fidelity-of-micropropagated-plants
#6
Smita Shinde, Joseph Kadanthottu Sebastian, Jyothi Ramesh Jain, Manohar Shirugumbi Hanamanthagouda, Hosakatte Niranjana Murthy
A reliable protocol has been established for in vitro propagation of Artemisia nilagirica var. nilagirica (Indian wormwood), a valuable medicinal plant from India. A highly proliferating organogenic callus was obtained on Murashige and Skoog (MS) medium supplemented with 2.5 µM IAA when nodal explants were cultured on MS medium supplemented with various growth regulators. Further, highest regeneration frequency (83.3 %) of adventitious shoots was observed, when the callus was sub-cultured on MS medium supplemented with 6-benzylaminopurine (BAP; 2...
October 2016: Physiology and Molecular Biology of Plants: An International Journal of Functional Plant Biology
https://www.readbyqxmd.com/read/27909790/strigolactones-affect-tomato-hormone-profile-and-somatic-embryogenesis
#7
Yuanli Wu, Evgenia Dor, Joseph Hershenhorn
Exogenously applied GR24 affected somatic embryo formation and morphogenesis of strigolactone-deficient tomato mutant through cross-talk with auxins and cytokinins indicating involvement of SLs in the embryogenic process. Strigolactones (SLs) mediate the regulation of plant responses to the environment through cross-talk with other plant hormones, especially auxins. Auxins play a crucial role in coordinating the morphogenesis and development of plant reproductive organs, including the signal-transduction cascade leading to the reprogramming of gene-expression patterns before embryo formation...
December 1, 2016: Planta
https://www.readbyqxmd.com/read/27889521/azacytidine-and-mir156-promote-rooting-in-adult-but-not-in-juvenile-arabidopsis-tissues
#8
Mehdi Massoumi, Frans A Krens, Richard G F Visser, Geert-Jan M De Klerk
Poor adventitious root (AR) formation is a major obstacle in micropropagation and conventional vegetative propagation of many crops. It is affected by many endogenous and exogenous factors. With respect to endogenous factors, the phase change from juvenile to adult has a major influence on AR formation and rooting is usually much reduced or even fully inhibited in adult tissues. It has been reported that the phase change is characterized by an increase in DNA-methylation and a decrease in the expression of microRNA156 (miR156)...
January 2017: Journal of Plant Physiology
https://www.readbyqxmd.com/read/27883217/nitric-oxide-is-involved-in-methane-induced-adventitious-root-formation-in-cucumber
#9
Fang Qi, Zhixin Xiang, Ninghai Kou, Weiti Cui, Daokun Xu, Ren Wang, Dan Zhu, Wenbiao Shen
Our previous studies revealed that methane (CH4 ) induces adventitious rooting in cucumber. However, the corresponding molecular mechanism is still elusive. In this work, we discovered that CH4 triggered the accumulation of nitric oxide (NO) and thereafter cucumber adventitious rooting, mimicking the inducing effects of sodium nitroprusside (SNP) and NONOate (two NO-releasing compounds). Above mentioned responses were sensitive to NO scavenger(s), showing that the accumulation of NO and adventitious root development were respectively impaired...
November 24, 2016: Physiologia Plantarum
https://www.readbyqxmd.com/read/27876840/transcriptome-profiling-shows-gene-regulation-patterns-in-ginsenoside-pathway-in-response-to-methyl-jasmonate-in-panax-quinquefolium-adventitious-root
#10
Juan Wang, Jinxin Li, Jianli Li, Shujie Liu, Xiaolei Wu, Jing Li, Wenyuan Gao
Here, we combine elicitors and transcriptomics to investigate the inducible biosynthesis of the ginsenoside from the Panax quinquefolium. Treatment of P. quinquefolium adventitious root with methyl jasmonate (MJ) results in an increase in ginsenoside content (43.66 mg/g compared to 8.32 mg/g in control group). Therefore, we sequenced the transcriptome of native and MJ treated adventitious root in order to elucidate the key differentially expressed genes (DEGs) in the ginsenoside biosynthetic pathway. Through DEG analysis, we found that 5,759 unigenes were up-regulated and 6,389 unigenes down-regulated in response to MJ treatment...
November 23, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27837086/cis-cinnamic-acid-is-a-novel-natural-auxin-efflux-inhibitor-that-promotes-lateral-root-formation
#11
Ward Steenackers, Petr Klíma, Mussa Quareshy, Igor Cesarino, Robert P Kumpf, Sander Corneillie, Pedro Araújo, Tom Viaene, Geert Goeminne, Moritz K Nowack, Karin Ljung, Jiří Friml, Joshua J Blakeslee, Ondřej Novák, Eva Zažímalová, Richard Napier, Wout Boerjan, Bartel Vanholme
Auxin steers numerous physiological processes in plants, making the tight control of its endogenous levels and spatiotemporal distribution a necessity. This regulation is achieved by different mechanisms, including auxin biosynthesis, metabolic conversions, degradation, and transport. Here, we introduce cis-cinnamic acid (c-CA) as a novel and unique addition to a small group of endogenous molecules affecting in planta auxin concentrations. c-CA is the photo-isomerization product of the phenylpropanoid pathway intermediate trans-CA (t-CA)...
January 2017: Plant Physiology
https://www.readbyqxmd.com/read/27831927/a-comparative-proteomic-analysis-for-adventitious-root-formation-in-lotus-root-nelumbo-nucifera-gaertn
#12
Cheng Libao, Jiang Runzhi, Yang Mengli, Li Liangjun, Li Shuyan
Adventitious roots (ARs) directly affect lotus seedling growth and product quality because principal root is not well developed. However, the details of AR formation at the molecular level have not been determined in lotus. Therefore, three stages were chosen to identify the change of proteins abundant during rhizome formation, using isobaric tags for relative and absolute quantization coupled with liquid chromatography-tandem mass spectrometry to gain insight into the molecular mechanisms involved in AR formation...
November 10, 2016: Zeitschrift Für Naturforschung. C, A Journal of Biosciences
https://www.readbyqxmd.com/read/27831474/ethylene-and-auxin-interaction-in-the-control-of-adventitious-rooting-in-arabidopsis-thaliana
#13
A Veloccia, L Fattorini, F Della Rovere, A Sofo, S D'Angeli, C Betti, G Falasca, M M Altamura
Adventitious roots (ARs) are post-embryonic roots essential for plant survival and propagation. Indole-3-acetic acid (IAA) is the auxin that controls AR formation; however, its precursor indole-3-butyric acid (IBA) is known to enhance it. Ethylene affects many auxin-dependent processes by affecting IAA synthesis, transport and/or signaling, but its role in AR formation has not been elucidated. This research investigated the role of ethylene in AR formation in dark-grown Arabidopsis thaliana seedlings, and its interaction with IAA/IBA...
December 2016: Journal of Experimental Botany
https://www.readbyqxmd.com/read/27790812/enhanced-photosynthesis-endows-seedling-growth-vigor-contributing-to-the-competitive-dominance-of-weedy-rice-over-cultivated-rice
#14
Lei Dai, Xiaoling Song, Baoye He, Bernal E Valverde, Sheng Qiang
BACKGROUND: Weedy rice, as one of the worst paddy field weeds worldwide, bears vigorous seedlings and dominantly competes with cultivated rice causing serious crop yield losses. To elucidate the causes of its stronger seedling vigor endowing its dominant competition with cultivated rice, comparative studies on seedling growth characteristics were conducted among six weedy rice biotypes and the two indica and japonica cultivars Shanyou-63 (SY-63) and Zhendao-8 (ZD-8), respectively, in the greenhouse...
October 28, 2016: Pest Management Science
https://www.readbyqxmd.com/read/27790230/comparative-proteomic-analysis-provides-insight-into-the-key-proteins-involved-in-cucumber-cucumis-sativus-l-adventitious-root-emergence-under-waterlogging-stress
#15
Xuewen Xu, Jing Ji, Xiaotian Ma, Qiang Xu, Xiaohua Qi, Xuehao Chen
Waterlogging is a common abiotic stress in both natural and agricultural systems, and it primarily affects plant growth by the slow oxygen diffusion in water. To sustain root function in the hypoxic environment, a key adaptation for waterlogging tolerant plants is the formation of adventitious roots (ARs). We found that cucumber waterlogging tolerant line Zaoer-N seedlings adapt to waterlogging stress by developing a larger number of ARs in hypocotyls, while almost no AR is generated in sensitive line Pepino...
2016: Frontiers in Plant Science
https://www.readbyqxmd.com/read/27784768/transcription-factors-wox11-12-directly-activate-wox5-7-to-promote-root-primordia-initiation-and-organogenesis
#16
Xiaomei Hu, Lin Xu
De novo organogenesis, which gives rise to adventitious roots and shoots, is a type of plant regeneration for survival after wounding. In Arabidopsis (Arabidopsis thaliana), two main cell fate transition steps are required to establish the root primordium during de novo root organogenesis from leaf explants. The first step from regeneration-competent cells to root founder cells involves activation of WUSCHEL-RELATED HOMEOBOX11 (WOX11) and WOX12 (WOX11/12) expression by auxin. However, the molecular mechanism controlling the second step of fate transition from root founder cells to root primordium is poorly understood...
December 2016: Plant Physiology
https://www.readbyqxmd.com/read/27780106/how-many-ways-are-there-to-make-a-root
#17
REVIEW
Kenneth D Birnbaum
Plants often make the same organ in different development contexts. Roots are a quintessential example, with embryonic, primary, lateral, adventitious, and regenerative roots common to many plants. The cellular origins and early morphologies of different roots can vary greatly, but the adult structures can be remarkably similar. Recent studies have highlighted the diversity of mechanisms that can initiate roots while late patterning mechanisms are frequently shared. In the middle stages when patterning emerges, evidence shows that antagonistic auxin-cytokinin interactions regulate tissue patterns in root embryogenesis, vascular organization, and regeneration but it is not yet clear if a common ontogeny for the root body plan exists...
December 2016: Current Opinion in Plant Biology
https://www.readbyqxmd.com/read/27762444/a-major-locus-involved-in-the-formation-of-the-radial-oxygen-loss-barrier-in-adventitious-roots-of-teosinte-zea-nicaraguensis-is-located-on-the-short-arm-of-chromosome-3
#18
Kohtaro Watanabe, Hirokazu Takahashi, Saori Sato, Shunsaku Nishiuchi, Fumie Omori, Al Imran Malik, Timothy David Colmer, Yoshiro Mano, Mikio Nakazono
A radial oxygen loss (ROL) barrier in roots of waterlogging-tolerant plants promotes oxygen movement via aerenchyma to the root tip, and impedes soil phytotoxin entry. The molecular mechanism and genetic regulation of ROL barrier formation are largely unknown. Zea nicaraguensis, a waterlogging-tolerant wild relative of maize (Zea mays ssp. mays), forms a tight ROL barrier in its roots when waterlogged. We used Z. nicaraguensis chromosome segment introgression lines (ILs) in maize (inbred line Mi29) to elucidate the chromosomal region involved in regulating root ROL barrier formation...
October 20, 2016: Plant, Cell & Environment
https://www.readbyqxmd.com/read/27753844/ed-02-1-acute-aortic-syndrome
#19
Jae-Kwan Song
The successful clinical introduction of various non-invasive imaging modalities has contributed to the establishment of 'acute aortic syndrome', a relatively new clinical syndrome incorporating several disease entities with similar clinical features (at the time of clinical presentation). Aortic dissection (AD) with intimal flap and two aortic channels (true and false lumens) is the most important disease entity in acute aortic syndrome. Clinical characteristics of AD have been established, with standardized treatment strategies depending on the affected site of the aorta...
September 2016: Journal of Hypertension
https://www.readbyqxmd.com/read/27752244/acetylcholinesterase-inhibition-and-antibacterial-activity-of-mondia-whitei-adventitious-roots-and-ex-vitro-grown-somatic-embryogenic-biomass
#20
Ponnusamy Baskaran, Aloka Kumari, Bhekumthetho Ncube, Johannes Van Staden
Mondia whitei (Hook.f.) Skeels is an important endangered medicinal and commercial plant in South Africa. In vitro propagation systems are required for biomass production and bioactivity analysis to supplement wild resources/stocks. Adventitious roots from somatic embryogenic explants using suspension culture and ex vitro-grown plants produced via somatic embryogenesis were established using different plant growth regulator treatments. The adventitious root biomass and different parts of ex vitro-grown and mother plants were used to investigate the potential for acetylcholinesterase (AChE) and antibacterial activities...
2016: Frontiers in Pharmacology
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