keyword
https://read.qxmd.com/read/37621118/multimodal-and-longitudinal-evaluation-of-novel-phenotype-genotype-correlation-of-cln3-isolated-retinal-degeneration-in-an-hispanic-female-with-heterozygous-mutations-c-944dup-and-c-1305c-g
#21
JOURNAL ARTICLE
Lucas A Garza-Garza, Priscila Villarreal-Martinez, Rocio Villafuerte-de la Cruz, Manuel Garza-Leon
BACKGROUND: Inherited retinal disorders (IRDs) are a complex group of heritable diseases which are characterized by rod, cone, retinal pigment epithelium, or optic nerve dysfunction. Recently, mutations in CLN3 have also been associated with isolated IRDs. Herein, a case with heterozygous CLN3 variations that had not been previously linked to a CLN3 -isolated retinal degeneration ( CLN3 IRD) phenotype in a Hispanic female and its multimodal imaging findings across a 10-year follow-up are presented...
August 24, 2023: Ophthalmic Genetics
https://read.qxmd.com/read/37601392/synthesis-and-crystal-structures-of-e-n-4-chloro-3-nitro-benzyl-idene-acetohydrazide-and-e-2-4-chloro-benzyl-idene-1-quinolin-8-yl-hydrazine
#22
JOURNAL ARTICLE
Tamer Nasr, Benson M Kariuki, Mai M Elansary, Radwan Elhaggar, Wafaa Zaghary
The syntheses of two benzyl-idenehydrazine derivatives, namely, ( E )- N '-(4-chloro-3-nitro-benzyl-idene)acetohydrazide, C9 H8 ClN3 O3 , and ( E )-2-(4-chloro-benzyl-idene)-1-(quinolin-8-yl)hydrazine, C16 H12 ClN3 , are reported. The mol-ecules have been characterized using IR, 1 H NMR, 13 C NMR and mass spectro-scopic and elemental analysis techniques, and their structures have been determined by single-crystal X-ray diffraction.
July 1, 2023: Acta Crystallographica. Section E, Crystallographic Communications
https://read.qxmd.com/read/37531631/hyperactive-ras-disrupts-cell-size-control-and-a-key-step-in-cell-cycle-entry-in-budding-yeast
#23
JOURNAL ARTICLE
Jerry T DeWitt, Jennifer C Chinwuba, Douglas R Kellogg
Severe defects in cell size are a nearly universal feature of cancer cells. However, the underlying causes are unknown. A previous study suggested that a hyperactive mutant of yeast Ras (ras2G19V) that is analogous to the human Ras oncogene causes cell size defects, which could provide clues to how oncogenes influence cell size. However, the mechanisms by which ras2G19V influences cell size are unknown. Here, we found that ras2G19V inhibits a critical step in cell cycle entry, in which an early G1 phase cyclin induces transcription of late G1 phase cyclins...
August 2, 2023: Genetics
https://read.qxmd.com/read/37400440/loss-of-the-batten-disease-protein-cln3-leads-to-mis-trafficking-of-m6pr-and-defective-autophagic-lysosomal-reformation
#24
JOURNAL ARTICLE
Alessia Calcagni', Leopoldo Staiano, Nicolina Zampelli, Nadia Minopoli, Niculin J Herz, Giuseppe Di Tullio, Tuong Huynh, Jlenia Monfregola, Alessandra Esposito, Carmine Cirillo, Aleksandar Bajic, Mahla Zahabiyon, Rachel Curnock, Elena Polishchuk, Luke Parkitny, Diego Luis Medina, Nunzia Pastore, Peter J Cullen, Giancarlo Parenti, Maria Antonietta De Matteis, Paolo Grumati, Andrea Ballabio
Batten disease, one of the most devastating types of neurodegenerative lysosomal storage disorders, is caused by mutations in CLN3. Here, we show that CLN3 is a vesicular trafficking hub connecting the Golgi and lysosome compartments. Proteomic analysis reveals that CLN3 interacts with several endo-lysosomal trafficking proteins, including the cation-independent mannose 6 phosphate receptor (CI-M6PR), which coordinates the targeting of lysosomal enzymes to lysosomes. CLN3 depletion results in mis-trafficking of CI-M6PR, mis-sorting of lysosomal enzymes, and defective autophagic lysosomal reformation...
July 3, 2023: Nature Communications
https://read.qxmd.com/read/37359347/protracted-cln3-batten-disease-in-mice-that-genetically-model-an-exon-skipping-therapeutic-approach
#25
JOURNAL ARTICLE
Jessica L Centa, Matthew P Stratton, Melissa A Pratt, Jenna R Osterlund Oltmanns, Douglas G Wallace, Steven A Miller, Jill M Weimer, Michelle L Hastings
Genetic mutations that disrupt open reading frames and cause translation termination are frequent causes of human disease and are difficult to treat due to protein truncation and mRNA degradation by nonsense-mediated decay, leaving few options for traditional drug targeting. Splice-switching antisense oligonucleotides offer a potential therapeutic solution for diseases caused by disrupted open reading frames by inducing exon skipping to correct the open reading frame. We have recently reported on an exon-skipping antisense oligonucleotide that has a therapeutic effect in a mouse model of CLN3 Batten disease, a fatal pediatric lysosomal storage disease...
September 12, 2023: Molecular Therapy. Nucleic Acids
https://read.qxmd.com/read/37338096/cerebrospinal-fluid-protein-biomarker-discovery-in-cln3
#26
JOURNAL ARTICLE
An N Dang Do, David E Sleat, Kiersten Campbell, Nicholas L Johnson, Haiyan Zheng, Christopher A Wassif, Ryan K Dale, Forbes D Porter
Syndromic CLN3-Batten is a fatal, pediatric, neurodegenerative disease caused by variants in CLN3 , which encodes the endolysosomal transmembrane CLN3 protein. No approved treatment for CLN3 is currently available. The protracted and asynchronous disease presentation complicates the evaluation of potential therapies using clinical disease progression parameters. Biomarkers as surrogates to measure the progression and effect of potential therapeutics are needed. We performed proteomic discovery studies using cerebrospinal fluid (CSF) samples from 28 CLN3-affected and 32 age-similar non-CLN3 individuals...
June 20, 2023: Journal of Proteome Research
https://read.qxmd.com/read/37305926/a-novel-porcine-model-of-cln3-batten-disease-recapitulates-clinical-phenotypes
#27
JOURNAL ARTICLE
Vicki J Swier, Katherine A White, Tyler B Johnson, Xiaojun Wang, Jimin Han, David A Pearce, Ruchira Singh, Arlene V Drack, Wanda Pfeifer, Christopher S Rogers, Jon J Brudvig, Jill M Weimer
Mouse models of CLN3 Batten disease, a rare lysosomal storage disorder with no cure, have improved our understanding of CLN3 biology and therapeutics through their ease of use and a consistent display of cellular pathology. However, the translatability of murine models is limited by disparities in anatomy, body size, life span, and inconsistent, subtle behavior deficits that can be difficult to detect in CLN3 mutant mouse models, limiting their utility in preclinical studies. Here we present a longitudinal characterization of a novel miniswine model of CLN3 disease that recapitulates the most common human pathogenic variant, an exon 7-8 deletion (CLN3Δex7/8)...
June 12, 2023: Disease Models & Mechanisms
https://read.qxmd.com/read/37245481/juvenile-cln3-disease-is-a-lysosomal-cholesterol-storage-disorder-similarities-with-niemann-pick-type-c-disease
#28
JOURNAL ARTICLE
Jacinda Chen, Rajesh Kumar Soni, Yimeng Xu, Sabrina Simoes, Feng-Xia Liang, Laura DeFreitas, Robert Hwang, Jorge Montesinos, Joseph H Lee, Estela Area-Gomez, Renu Nandakumar, Badri Vardarajan, Catherine Marquer
BACKGROUND: The most common form of neuronal ceroid lipofuscinosis (NCL) is juvenile CLN3 disease (JNCL), a currently incurable neurodegenerative disorder caused by mutations in the CLN3 gene. Based on our previous work and on the premise that CLN3 affects the trafficking of the cation-independent mannose-6 phosphate receptor and its ligand NPC2, we hypothesised that dysfunction of CLN3 leads to the aberrant accumulation of cholesterol in the late endosomes/lysosomes (LE/Lys) of JNCL patients' brains...
May 26, 2023: EBioMedicine
https://read.qxmd.com/read/37209872/enhanced-expression-of-the-autophagosomal-marker-lc3-ii-in-detergent-resistant-protein-lysates-from-a-cln3-patient-s-post-mortem-brain
#29
JOURNAL ARTICLE
Francesco Pezzini, Michele Fiorini, Stefano Doccini, Filippo Maria Santorelli, Gianluigi Zanusso, Alessandro Simonati
• Neuronal Ceroido Lipofuscinoses (NCL) are inherited, neurodegenerative disorders associated with lysosomal storage. • Impaired autophagy plays a pathogenetic role in several NCL forms, including CLN3 disease, but study on human brains lacks. • In post-mortem brain samples of a CLN3 patient the LC3-I to LC3-II shift was consistent with activated autophagy. However, the autophagic process seemed to be ineffective due to the presence of lysosomal storage markers. • After fractionation with buffers of increasing detergent-denaturing strength, a peculiar solubility pattern of LC3-II was observed in CLN3 patient's samples, suggesting a different lipid composition of the membranes where LC3-II is stacked...
May 18, 2023: Biochimica et Biophysica Acta. Molecular Basis of Disease
https://read.qxmd.com/read/37113550/etiology-of-anxious-and-fearful-behavior-in-juvenile-neuronal-ceroid-lipofuscinosis-cln3-disease
#30
JOURNAL ARTICLE
John R Ostergaard
BACKGROUND: Juvenile neuronal ceroid lipofuscinosis (JNCL, CLN3) is a childhood-onset neurodegenerative disease with prominent symptoms comprising a pediatric dementia syndrome. As in adult dementia, behavioral symptoms like mood disturbances and anxiety are common. In contrast to in adult dementia, however, the anxious behavioral symptoms increase during the terminal phase of JNCL disease. In the present study, the current understanding of the neurobiological mechanisms of anxiety and anxious behavior in general is addressed as will a discussion of the mechanism of the anxious behavior seen in young JNCL patients...
2023: Frontiers in Psychiatry
https://read.qxmd.com/read/37086568/brain-proton-mr-spectroscopy-measurements-in-cln3-disease
#31
JOURNAL ARTICLE
An N Dang Do, Eva H Baker, Cristan A Farmer, Ariane G Soldatos, Audrey E Thurm, Forbes D Porter
BACKGROUND: CLN3 is an autosomal recessive lysosomal disorder with intracellular accumulation of ceroid-lipofuscins. CLN3 classically has onset around 4-6 years of age involving vision loss, followed by developmental regression and seizures. Symptoms are progressive and result in premature death. Because treatments are under development, here we explore magnetic resonance spectroscopy (MRS) measurements of metabolite levels in the brain as a potential objective outcome measures. METHODS: Individuals with genetically confirmed CLN3 were enrolled from October 2017-November 2021 in a prospective natural history study (NCT033007304)...
April 15, 2023: Molecular Genetics and Metabolism
https://read.qxmd.com/read/37078466/a-mouse-mutant-deficient-in-both-neuronal-ceroid-lipofuscinosis-associated-proteins-cln3-and-tpp1
#32
JOURNAL ARTICLE
David E Sleat, Whitney Banach-Petrosky, Katherine E Larrimore, Yuliya Nemtsova, Jennifer A Wiseman, Allison Najafi, Dymonn Johnson, Timothy A Poole, Keigo Takahashi, Jonathan D Cooper, Peter Lobel
Late-infantile neuronal ceroid lipofuscinosis (LINCL) and juvenile neuronal ceroid lipofuscinosis (JNCL) are inherited neurodegenerative diseases caused by mutations in the genes encoding lysosomal proteins tripeptidyl peptidase 1 (TPP1) and CLN3 protein, respectively. TPP1 is well-understood and, aided by animal models that accurately recapitulate the human disease, enzyme replacement therapy has been approved and other promising therapies are emerging. In contrast, there are no effective treatments for JNCL, partly because the function of the CLN3 protein remains unknown but also because animal models have attenuated disease and lack robust survival phenotypes...
April 20, 2023: Journal of Inherited Metabolic Disease
https://read.qxmd.com/read/37075317/mechanism-and-kinetics-of-prothioconazole-photodegradation-in-aqueous-solution
#33
JOURNAL ARTICLE
Quan Gao, Hao Wu, Yeping Zhou, Jinjing Xiao, Yanhong Shi, Haiqun Cao
This study investigated the effects of light source, pH value, and NO3 - concentration on the photodegradation of prothioconazole in aqueous solution. The half-life ( t 1/2 ) of prothioconazole was 173.29, 21.66, and 11.18 min under xenon, ultraviolet, and high-pressure mercury lamps, respectively. At pH values of 4.0, 7.0, and 9.0 under a xenon lamp light source, the t 1/2 values were 693.15, 231.05, and 99.02 min, respectively. Inorganic substance NO3 - clearly promoted the photodegradation of prothioconazole, with t 1/2 values of 115...
April 19, 2023: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/37074398/clinical-and-genetic-characterization-of-neuronal-ceroid-lipofuscinoses-ncls-in-29-iranian-patients-identification-of-11-novel-mutations
#34
JOURNAL ARTICLE
Samareh Panjeshahi, Parvaneh Karimzadeh, Abolfazl Movafagh, Farzad Ahmadabadi, Elham Rahimian, Sahar Alijanpour, Mohammad Miryounesi
Neuronal ceroid lipofuscinoses (NCLs) are neurodegenerative lysosomal storage diseases which are considered among the most frequent causes of dementia in childhood worldwide This study aimed to identify the gene variants, molecular etiologies, and clinical features in 23 unrelated Iranian families with NCL. In total, 29 patients with neuronal ceroid lipofuscinoses (NCLs), diagnosed based on clinical manifestations, MRI neuroimaging, and electroencephalography (EEG), were recruited for this study. Through whole-exome sequencing (WES), functional prediction, Sanger sequencing, and segregation analysis, we found that 12 patients (41...
April 19, 2023: Human Genetics
https://read.qxmd.com/read/37039534/recognition-and-epileptology-of-protracted-cln3-disease
#35
JOURNAL ARTICLE
Jillian M Cameron, John A Damiano, Bronwyn Grinton, Patrick W Carney, Penny McKelvie, Peter Silbert, Nicholas Lawn, Ingrid E Scheffer, Karen L Oliver, Michael S Hildebrand, Samuel F Berkovic
OBJECTIVE: To analyse phenotypic features of a cohort of patients with protracted CLN3 disease to improve recognition of the disorder. METHODS: We analysed phenotypic data of ten patients from six families with protracted CLN3 disease. Haplotype analysis was performed in three reportedly unrelated families. RESULTS: Visual impairment was the initial symptom with onset at 5-9 years, similar to classic CLN3 disease. Mean time from onset of visual impairment to seizures was 12 years (range 6-41 years)...
April 11, 2023: Epilepsia
https://read.qxmd.com/read/37035740/early-postnatal-administration-of-an-aav9-gene-therapy-is-safe-and-efficacious-in-cln3-disease
#36
JOURNAL ARTICLE
Tyler B Johnson, Jon J Brudvig, Shibi Likhite, Melissa A Pratt, Katherine A White, Jacob T Cain, Clarissa D Booth, Derek J Timm, Samantha S Davis, Brandon Meyerink, Ricardo Pineda, Cassandra Dennys-Rivers, Brian K Kaspar, Kathrin Meyer, Jill M Weimer
CLN3 disease, caused by biallelic mutations in the CLN3 gene, is a rare pediatric neurodegenerative disease that has no cure or disease modifying treatment. The development of effective treatments has been hindered by a lack of etiological knowledge, but gene replacement has emerged as a promising therapeutic platform for such disorders. Here, we utilize a mouse model of CLN3 disease to test the safety and efficacy of a cerebrospinal fluid-delivered AAV9 gene therapy with a study design optimized for translatability...
2023: Frontiers in Genetics
https://read.qxmd.com/read/37014321/bioinformatics-analysis-and-experimental-validation-of-a-novel-autophagy-related-signature-relevant-to-immune-infiltration-for-recurrence-prediction-after-curative-hepatectomy
#37
JOURNAL ARTICLE
Huaxiang Wang, Chengkai Yang, Dong Li, Ruling Wang, Yanbing Li, Lizhi Lv
Hepatocellular carcinoma (HCC) remains imposing an enormous economic and healthcare burden worldwide. In this present study, we constructed and validated a novel autophagy-related gene signature to predict the recurrence of HCC patients. A total of 29 autophagy-related differentially expressed genes were identified. A five-gene signature (CLN3, HGF, TRIM22, SNRPD1, and SNRPE) was constructed for HCC recurrence prediction. Patients in high-risk groups exhibited a significantly poor prognosis compared with low-risk patients both in the training set (GSE14520 dataset) and the validation set (TCGA and GSE76427 dataset)...
April 3, 2023: Aging
https://read.qxmd.com/read/36965618/the-batten-disease-protein-cln3-is-important-for-stress-granules-dynamics-and-translational-activity
#38
JOURNAL ARTICLE
Emily L Relton, Nicolas J Roth, Seda Yasa, Abuzar Kaleem, Guido Hermey, Christopher J Minnis, Sara E Mole, Tatyana Shelkovnikova, Stephane Lefrancois, Peter J McCormick, Nicolas Locker
The assembly of membrane-less organelles such as stress granules (SGs) is emerging as central in helping cells rapidly respond and adapt to stress. Following stress sensing, the resulting global translational shutoff leads to the condensation of stalled mRNAs and proteins into SGs. By reorganising cytoplasmic contents, SGs can modulate RNA translation, biochemical reactions and signalling cascades to promote survival until the stress is resolved. While mechanisms for SG disassembly are not widely understood, the resolution of SGs is important for maintaining cell viability and protein homeostasis...
March 23, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/36964447/early-recognition-of-cln3-disease-facilitated-by-visual-electrophysiology-and-multimodal-imaging
#39
JOURNAL ARTICLE
Dhimas H Sakti, Elisa E Cornish, Clare L Fraser, Benjamin M Nash, Trent M Sandercoe, Michael M Jones, Neil A Rowe, Robyn V Jamieson, Alexandra M Johnson, John R Grigg
BACKGROUND: Neuronal ceroid lipofuscinosis is a group of neurodegenerative disorders with varying visual dysfunction. CLN3 is a subtype which commonly presents with visual decline. Visual symptomatology can be indistinct making early diagnosis difficult. This study reports ocular biomarkers of CLN3 patients to assist clinicians in early diagnosis, disease monitoring, and future therapy. METHODS: Retrospective review of 5 confirmed CLN3 patients in our eye clinic...
March 25, 2023: Documenta Ophthalmologica. Advances in Ophthalmology
https://read.qxmd.com/read/36912596/phenotypic-variability-of-retinal-disease-among-a-cohort-of-patients-with-variants-in-the-cln-genes
#40
JOURNAL ARTICLE
Masha Kolesnikova, Jose Ronaldo Lima de Carvalho, Jin Kyun Oh, Megan Soucy, Aykut Demirkol, Angela H Kim, Stephen H Tsang, Mark P Breazzano
PURPOSE: To describe the phenotype of CLN-associated retinal dystrophy in a subset of patients at the Columbia University Medical Center, United States, and the Hospital das Clínicas de Pernambuco, Brazil, in comparison to the published literature. METHODS: Eleven patients with confirmed biallelic variants in the CLN genes were evaluated via dilated fundus examination, clinical imaging, and full-field electroretinogram. A thorough literature search was conducted to determine previously published variants and associated phenotypes...
March 1, 2023: Investigative Ophthalmology & Visual Science
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