keyword
https://read.qxmd.com/read/38642938/dysregulation-of-cd4-and-cd8-resident-memory-t-myeloid-and-stromal-cells-in-steroid-experienced-checkpoint-inhibitor-colitis
#21
JOURNAL ARTICLE
Jun Yan He, Yang-Joon Kim, Elvira Mennillo, Iulia Rusu, Jared Bain, Arjun A Rao, Christopher Andersen, Karen Law, Hai Yang, Jessica Tsui, Alan Shen, Brittany Davidson, Divyashree Kushnoor, Yimin Shi, Frances Fan, Alexander Cheung, Li Zhang, Lawrence Fong, Alexis J Combes, Angela O Pisco, Michael G Kattah, David Y Oh
BACKGROUND: Colitis caused by checkpoint inhibitors (CPI) is frequent and is treated with empiric steroids, but CPI colitis mechanisms in steroid-experienced or refractory disease are unclear. METHODS: Using colon biopsies and blood from predominantly steroid-experienced CPI colitis patients, we performed multiplexed single-cell transcriptomics and proteomics to nominate contributing populations. RESULTS: CPI colitis biopsies showed enrichment of CD4+ resident memory (RM) T cells in addition to CD8+ RM and cytotoxic CD8+ T cells...
April 19, 2024: Journal for Immunotherapy of Cancer
https://read.qxmd.com/read/38642881/bio-analog-dissipative-structures-and-principles-of-biological-behavior
#22
JOURNAL ARTICLE
Benjamin De Bari, Dilip K Kondepudi, Ashwin Vaidya, James A Dixon
The place of living organisms in the natural world is a nearly perennial question in philosophy and the sciences; how can inanimate matter yield animate beings? A dominant answer for several centuries has been to treat organisms as sophisticated machines, studying them with the mechanistic physics and chemistry that have given rise to technology and complex machines. Since the early 20th century, many scholars have sought instead to naturalize biology through thermodynamics, recognizing the precarious far-from-equilibrium state of organisms...
April 18, 2024: Bio Systems
https://read.qxmd.com/read/38642787/decellularized-kidney-extracellular-matrix-based-hydrogels-for-renal-tissue-engineering
#23
JOURNAL ARTICLE
Rita Quinteira, Sara Gimondi, Nelson O Monteiro, Rita Sobreiro-Almeida, Laura Lasagni, Paola Romagnani, Nuno M Neves
Kidney regeneration is hindered by the limited pool of intrinsic reparative cells. Advanced therapies targeting renal regeneration have the potential to alleviate the clinical and financial burdens associated with kidney disease. Delivery systems for cells, extracellular vesicles, or growth factors aimed at enhancing regeneration can benefit from vehicles enabling targeted delivery and controlled release. Hydrogels, optimized to carry biological cargo while promoting regeneration, have emerged as promising candidates for this purpose...
April 18, 2024: Acta Biomaterialia
https://read.qxmd.com/read/38642661/single-cell-analysis-identifies-critical-regulators-of-spermatogonial-development-and-differentiation-in-cattle-yak-bulls
#24
JOURNAL ARTICLE
Yi-Wen Zhang, Shi-Xin Wu, Guo-Wen Wang, Rui-Dong Wan, Qi-En Yang
Spermatogenesis is a continuous process in which functional sperm are produced through a series of mitotic and meiotic divisions and morphological changes in germ cells. The aberrant development and fate transitions of spermatogenic cells cause hybrid sterility in mammals. Cattle-yak, a hybrid animal between taurine cattle (Bos taurus) and yak (Bos grunniens), exhibits male-specific sterility due to spermatogenic failure. In the present study, we performed single-cell RNA sequencing analysis to identify differences in testicular cell composition and the developmental trajectory of spermatogenic cells between yak and cattle-yak...
April 18, 2024: Journal of Dairy Science
https://read.qxmd.com/read/38640996/cpg-methylation-changes-in-human-mesenchymal-and-neural-stem-cells-in-response-to-in-vitro-niche-modifications
#25
JOURNAL ARTICLE
Martina Gyimesi, Lotta E Oikari, Chieh Yu, Heidi G Sutherland, Dale R Nyholt, Lyn R Griffiths, Andre J Van Wijnen, Rachel K Okolicsanyi, Larisa M Haupt
Stem cell therapies hold promise in addressing the burden of neurodegenerative diseases with human embryonic neural stem cells (hNSC-H9s) and bone marrow-derived human mesenchymal stem cells (hMSCs) as viable candidates. The induction of hMSC neurospheres (hMSC-IN) generate a more lineage-restricted common neural progenitor-like cell population, potentially tunable by heparan sulfate proteoglycans (HSPGs). We examined CpG (5mC) site methylation patterns using Illumina Infinium 850K EPIC arrays in hNSC-H9, hMSCs and hMSC-IN cultures with HSPG agonist heparin at early and late phases of growth...
April 17, 2024: Biochimie
https://read.qxmd.com/read/38640834/advanced-cell-and-gene-therapies-in-cardiology
#26
REVIEW
Adriana Bastos Carvalho, Tais Hanae Kasai-Brunswick, Antonio Carlos Campos de Carvalho
We review the evidence for the presence of stem/progenitor cells in the heart and the preclinical and clinical data using diverse cell types for the therapy of cardiac diseases. We highlight the failure of adult stem/progenitor cells to ameliorate heart function in most cardiac diseases, with the possible exception of refractory angina. The use of pluripotent stem cell-derived cardiomyocytes is analysed as a viable alternative therapeutic option but still needs further research at preclinical and clinical stages...
April 18, 2024: EBioMedicine
https://read.qxmd.com/read/38640653/extracellular-vesicles-selective-capture-by-peptide-functionalized-hollow-fiber-membranes
#27
JOURNAL ARTICLE
Simona Salerno, Antonella Piscioneri, Sabrina Morelli, Alessandro Gori, Elena Provasi, Paola Gagni, Lucio Barile, Marina Cretich, Marcella Chiari, Loredana De Bartolo
Recently, membrane devices and processes have been applied for the separation and concentration of subcellular components such as extracellular vesicles (EVs), which play a diagnostic and therapeutic role in many pathological conditions. However, the separation and isolation of specific EV populations from other components found in biological fluids is still challenging. Here, we developed a peptide-functionalized hollow fiber (HF) membrane module to achieve the separation and enrichment of highly pure EVs derived from the culture media of human cardiac progenitor cells...
April 12, 2024: Journal of Colloid and Interface Science
https://read.qxmd.com/read/38640116/tumor-microenvironment-restricts-il-10-induced-multipotent-progenitors-to-myeloid-lymphatic-phenotype
#28
JOURNAL ARTICLE
Lisa Volk-Draper, Shaswati Athaiya, Maria Espinosa Gonzalez, Nihit Bhattarai, Andrew Wilber, Sophia Ran
Lymphangiogenesis is induced by local pro-lymphatic growth factors and bone marrow (BM)-derived myeloid-lymphatic endothelial cell progenitors (M-LECP). We previously showed that M-LECP play a significant role in lymphangiogenesis and lymph node metastasis in clinical breast cancer (BC) and experimental BC models. We also showed that differentiation of mouse and human M-LECP can be induced through sequential activation of colony stimulating factor-1 (CSF-1) and Toll-like receptor-4 (TLR4) pathways. This treatment activates the autocrine interleukin-10 (IL-10) pathway that, in turn, induces myeloid immunosuppressive M2 phenotype along with lymphatic-specific proteins...
2024: PloS One
https://read.qxmd.com/read/38640065/protocol-for-efficient-crispr-cas9-mediated-fluorescent-tag-knockin-in-hard-to-transfect-erythroid-cell-lines
#29
JOURNAL ARTICLE
Virginie Deleuze, Eric Soler, Charlotte Andrieu-Soler
Precise insertion of fluorescent tags by CRISPR-Cas9-mediated homologous recombination (HR) in mammalian genes is a powerful tool allowing to study gene function and protein gene products. Here, we present a protocol for efficient HR-mediated targeted insertion of fluorescent markers in the genome of hard-to-transfect erythroid cell lines MEL (mouse erythroleukemic) and MEDEP (mouse ES cell-derived erythroid progenitor line). We describe steps for plasmid construction, electroporation, amplification, and verification of genome editing...
April 17, 2024: STAR protocols
https://read.qxmd.com/read/38639812/evaluation-of-histological-and-ultrastructural-changes-provoked-by-prenatal-tramadol-on-postnatal-cortical-cerebellar-neuronal-development-in-rats-possible-implication-of-ki67-gfap-and-microrna-7-p53-signalling-trajectories
#30
JOURNAL ARTICLE
Walaa Adel Abdelmoez
Tramadol is a novel centrally acting analgesic. Despite, its implementation during pregnancy may impair neuronal survival and synaptic development in neonatal cerebella. The current investigation assessed the histological and ultrastructural alterations in postnatal cortical cerebellar neuronal development induced by prenatal tramadol. 30 offsprings were divided to control group I: fifteen pups born to mothers given saline from D10 till D21 of gestation. Tramadol-treated group II: fifteen pups born to mothers received tramadol HCL (50 mg/kg/day) from D10 till D21 of gestation...
April 19, 2024: Journal of Molecular Histology
https://read.qxmd.com/read/38639380/patients-with-coronary-microvascular-dysfunction-have-less-circulating-%C3%AE-klotho
#31
JOURNAL ARTICLE
Nadia Akhiyat, Ilke Ozcan, Rajiv Gulati, Abhiram Prasad, Tamara Tchkonia, James L Kirkland, Bradley Lewis, Lilach O Lerman, Amir Lerman
BACKGROUND: Coronary microvascular dysfunction (CMD) represents an early functional characteristic of coronary vascular aging. Klotho (α-klotho) is a circulating protein inversely linked to physiological aging. We examined low klotho as a potential marker for vascular aging in patients with CMD and no coronary artery disease. METHODS AND RESULTS: Patients undergoing nonurgent angiogram for chest pain who had no coronary artery disease underwent invasive coronary microvascular and endothelial function testing...
April 19, 2024: Journal of the American Heart Association
https://read.qxmd.com/read/38639242/yap-and-taz-differentially-regulate-postnatal-cortical-progenitor-proliferation-and-astrocyte-differentiation
#32
JOURNAL ARTICLE
Jessie Chen, Yung-Hsu Tsai, Anne Linden, John A Kessler, Chian-Yu Peng
WW domain-containing transcription regulator 1 (TAZ) and Yes-associated protein (YAP) are transcriptional co-activators traditionally studied together as a part of the Hippo pathway and best known for their roles in stem cell proliferation and differentiation. Despite their similarities, TAZ and YAP can exert divergent cellular effects by differentially interacting with other signaling pathways that regulate stem cell maintenance or differentiation. In this study, we show that TAZ regulates astrocytic differentiation and maturation of postnatal neural stem and progenitor cells (NPCs), and that TAZ mediates some but not all of the effects of bone morphogenetic protein (BMP) signaling on astrocytic development...
April 19, 2024: Journal of Cell Science
https://read.qxmd.com/read/38638671/a-review-of-bruton-s-tyrosine-kinase-inhibitors-in-multiple-sclerosis
#33
REVIEW
Laura Airas, Robert A Bermel, Tanuja Chitnis, Hans-Peter Hartung, Jin Nakahara, Olaf Stuve, Mitzi J Williams, Bernd C Kieseier, Heinz Wiendl
Bruton's tyrosine kinase (BTK) inhibitors are an emerging class of therapeutics in multiple sclerosis (MS). BTK is expressed in B-cells and myeloid cells, key progenitors of which include dendritic cells, microglia and macrophages, integral effectors of MS pathogenesis, along with mast cells, establishing the relevance of BTK inhibitors to diverse autoimmune conditions. First-generation BTK inhibitors are currently utilized in the treatment of B-cell malignancies and show efficacy in B-cell modulation. B-cell depleting therapies have shown success as disease-modifying treatments (DMTs) in MS, highlighting the potential of BTK inhibitors for this indication; however, first-generation BTK inhibitors exhibit a challenging safety profile that is unsuitable for chronic use, as required for MS DMTs...
2024: Therapeutic Advances in Neurological Disorders
https://read.qxmd.com/read/38638145/altered-neuroepithelial-morphogenesis-and-migration-defects-in-ipsc-derived-cerebral-organoids-and-2d-neural-stem-cells-in-familial-bipolar-disorder
#34
JOURNAL ARTICLE
Kruttika Phalnikar, M Srividya, S V Mythri, N S Vasavi, Archisha Ganguly, Aparajita Kumar, Padmaja S, Kishan Kalia, Srishti S Mishra, Sreeja Kumari Dhanya, Pradip Paul, Bharath Holla, Suhas Ganesh, Puli Chandramouli Reddy, Reeteka Sud, Biju Viswanath, Bhavana Muralidharan
Bipolar disorder (BD) is a severe mental illness that can result from neurodevelopmental aberrations, particularly in familial BD, which may include causative genetic variants. In the present study, we derived cortical organoids from BD patients and healthy (control) individuals from a clinically dense family in the Indian population. Our data reveal that the patient organoids show neurodevelopmental anomalies, including organisational, proliferation and migration defects. The BD organoids show a reduction in both the number of neuroepithelial buds/cortical rosettes and the ventricular zone size...
2024: Oxf Open Neurosci
https://read.qxmd.com/read/38637896/transcriptomic-profiling-across-human-serotonin-neuron-differentiation-via-the-fev-reporter-system
#35
JOURNAL ARTICLE
Yingqi Li, Jinjin Duan, You Li, Meihui Zhang, Jiaan Wu, Guanhao Wang, Shuanqing Li, Zhangsen Hu, Yi Qu, Yunhe Li, Xiran Hu, Fei Guo, Lining Cao, Jianfeng Lu
BACKGROUND: The detailed transcriptomic profiles during human serotonin neuron (SN) differentiation remain elusive. The establishment of a reporter system based on SN terminal selector holds promise to produce highly-purified cells with an early serotonergic fate and help elucidate the molecular events during human SN development process. METHODS: A fifth Ewing variant (FEV)-EGFP reporter system was established by CRISPR/Cas9 technology to indicate SN since postmitotic stage...
April 19, 2024: Stem Cell Research & Therapy
https://read.qxmd.com/read/38637847/cell-specific-extracellular-vesicle-encapsulated-exogenous-gaba-controls-seizures-in-epilepsy
#36
JOURNAL ARTICLE
Abhijna Ballal R, Shivakumar Reddy K, Divya Chandran, Sumukha Hegde, Raghavendra Upadhya, Praveen Kumar Se, Smita Shenoy, Vasudha Devi, Dinesh Upadhya
BACKGROUND: Epilepsy affects ∼60 million people worldwide. Most antiseizure medications in the market act on voltage-gated sodium or calcium channels, indirectly modulating neurotransmitter GABA or glutamate levels or multiple targets. Earlier studies made significant efforts to directly deliver GABA into the brain with varied success. Herein, we have hypothesized to directly deliver exogenous GABA to the brain with epilepsy through extracellular vesicles (EVs) from human GABA-producing cells and their progenitors as EVs largely mimic their parent cell composition...
April 19, 2024: Stem Cell Research & Therapy
https://read.qxmd.com/read/38637723/a-historical-stepping-stone-path-for-an-island-colonizing-cactus-across-a-submerged-bridge-archipelago
#37
JOURNAL ARTICLE
Fernando Faria Franco, Danilo Trabuco Amaral, Isabel A S Bonatelli, Jared B Meek, Evandro Marsola Moraes, Daniela Cristina Zappi, Nigel Paul Taylor, Deren A R Eaton
Here we use population genomic data (ddRAD-Seq) and ecological niche modeling to test biogeographic hypotheses for the divergence of the island-endemic cactus species Cereus insularis Hemsl. (Cereeae; Cactaceae) from its sister species C. fernambucensis Lem. The Cereus insularis grows in the Fernando de Noronha Islands (FNI), a Neotropical archipelago located 350 km off the Brazilian Atlantic Forest (BAF) coast. Phylogeographic reconstructions support a northward expansion by the common ancestor of C...
April 18, 2024: Heredity
https://read.qxmd.com/read/38637559/caspase-8-deletion-causes-infection-inflammation-induced-bone-marrow-failure-and-mds-like-disease-in-mice
#38
JOURNAL ARTICLE
Shanhui Liu, Kanak Joshi, Lei Zhang, Wenyan Li, Ryan Mack, Austin Runde, Patrick A Hagen, Kevin Barton, Peter Breslin, Hong-Long Ji, Ameet R Kini, Zhiping Wang, Jiwang Zhang
Myelodysplastic syndromes (MDS) are a heterogeneous group of pre-leukemic hematopoietic disorders characterized by cytopenia in peripheral blood due to ineffective hematopoiesis and normo- or hypercellularity and morphologic dysplasia in bone marrow (BM). An inflammatory BM microenvironment and programmed cell death of hematopoietic stem/progenitor cells (HSPCs) are thought to be the major causes of ineffective hematopoiesis in MDS. Pyroptosis, apoptosis and necroptosis (collectively, PANoptosis) are observed in BM tissues of MDS patients, suggesting an important role of PANoptosis in MDS pathogenesis...
April 18, 2024: Cell Death & Disease
https://read.qxmd.com/read/38637269/allopolyploid-subgenome-identification-and-implications-for-evolutionary-analysis
#39
REVIEW
Adam M Session
Whole-genome duplications (WGDs) are widespread genomic events in eukaryotes that are hypothesized to contribute to the evolutionary success of many lineages, including flowering plants, Saccharomyces yeast, and vertebrates. WGDs generally can be classified into autopolyploids (ploidy increase descended from one species) or allopolyploids (ploidy increase descended from multiple species). Assignment of allopolyploid progenitor species (called subgenomes in the polyploid) is important to understanding the biology and evolution of polyploids, including the asymmetric subgenome evolution following hybridization (biased fractionation)...
April 17, 2024: Trends in Genetics: TIG
https://read.qxmd.com/read/38637173/de-novo-domestication-what-about-the-weeds
#40
REVIEW
Pedro M P Correia, Javad Najafi, Michael Palmgren
Most high-yielding crops are susceptible to abiotic and biotic stresses, making them particularly vulnerable to the potential effects of climate change. A possible alternative is to accelerate the domestication of wild plants that are already tolerant to harsh conditions and to increase their yields by methods such as gene editing. We foresee that crops' wild progenitors could potentially compete with the resulting de novo domesticated plants, reducing yields. To improve the recognition of weeds, we propose using gene editing techniques to introduce traits into de novo domesticated crops that will allow for visual recognition of the crops by weeding robots that have been trained by machine learning...
March 28, 2024: Trends in Plant Science
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