keyword
https://read.qxmd.com/read/38653793/neutron-instrument-concepts-for-a-high-intensity-moderator-at-the-european-spallation-source
#21
JOURNAL ARTICLE
Stavros Samothrakitis, Mads Bertelsen, Peter K Willendrup, Erik B Knudsen, Camilla B Larsen, Nicola Rizzi, Luca Zanini, Valentina Santoro, Markus Strobl
In the course of the Horizon 2020 project HighNESS, a second moderator concept has been developed for the European Spallation Source, which complements the currently built moderator and is optimized for high intensity with a large viewable surface area. In this work we introduce conceptual designs for neutron instruments for condensed matter research designed to make optimal use of the capabilities of this moderator. The focus is on two concepts for small-angle neutron scattering and one neutron imaging instrument, which are intended to complement corresponding instruments that are already under construction at the European Spallation Source...
April 23, 2024: Scientific Reports
https://read.qxmd.com/read/38653772/physiography-foraging-mobility-and-the-first-peopling-of-sahul
#22
JOURNAL ARTICLE
Tristan Salles, Renaud Joannes-Boyau, Ian Moffat, Laurent Husson, Manon Lorcery
The route and speed of migration into Sahul by Homo sapiens remain a major research question in archaeology. Here, we introduce an approach which models the impact of the physical environment on human mobility by combining time-evolving landscapes with Lévy walk foraging patterns, this latter accounting for a combination of short-distance steps and occasional longer moves that hunter-gatherers likely utilised for efficient exploration of new environments. Our results suggest a wave of dispersal radiating across Sahul following riverine corridors and coastlines...
April 23, 2024: Nature Communications
https://read.qxmd.com/read/38653403/prevalence-and-detection-methodology-for-preliminary-exploration-of-ntrk-fusion-in-gastric-cancer-from-a-single-center-retrospective-cohort
#23
JOURNAL ARTICLE
Kun Dong, Lisha Yin, Yu Wang, Ling Jia, Xinting Diao, Xiaozheng Huang, Lixin Zhou, Dongmei Lin, Yu Sun
The fusion of neurotrophic tyrosine receptor kinase (NTRK) is a novel target for cancer therapy and offers hope for patients with gastric cancer (GC). However, there are few studies on the prevalence and detection methods of NTRK fusions in GC. In this study, we used immunohistochemistry (IHC) as a screening method to select cases for molecular testing and evaluated the effectiveness of IHC, fluorescence in situ hybridization (FISH), and next-generation sequencing (NGS). We retrospectively collected 1970 patients with GC...
April 21, 2024: Human Pathology
https://read.qxmd.com/read/38653294/-severe-conjunctival-and-corneal-epithelial-dysplasia-a-case-series
#24
JOURNAL ARTICLE
Angelika Jähnig, Kristina Pfau, Peter Meyer, Zisis Gatzioufas
BACKGROUND/OBJECTIVES: Ocular surface squamous neoplasia (OSSN) are among the most frequent non-pigmented malignancies of the ocular surface. They have a wide range of histological characteristics - ranging from mild epithelial dysplasia to invasive carcinoma of the squamous cells of the cornea. They may be restricted to the conjunctiva or also involve the cornea. As there are no leading symptoms in the early stages, diagnosis may be very delayed in patients who do not receive regular ophthalmological treatment...
April 2024: Klinische Monatsblätter Für Augenheilkunde
https://read.qxmd.com/read/38653188/active-surveillance-pharmacovigilance-for-clostridioides-difficile-infection-and-gastrointestinal-bleeding-an-analytic-framework-based-on-case-control-studies
#25
JOURNAL ARTICLE
Ravy K Vajravelu, Amy R Byerly, Robert Feldman, Scott D Rothenberger, Robert E Schoen, Walid F Gellad, James D Lewis
BACKGROUND: Active surveillance pharmacovigilance is an emerging approach to identify medications with unanticipated effects. We previously developed a framework called pharmacopeia-wide association studies (PharmWAS) that limits false positive medication associations through high-dimensional confounding adjustment and set enrichment. We aimed to assess the transportability and generalizability of the PharmWAS framework by using medical claims data to reproduce known medication associations with Clostridioides difficile infection (CDI) or gastrointestinal bleeding (GIB)...
April 22, 2024: EBioMedicine
https://read.qxmd.com/read/38653079/the-perception-and-passage-of-time-during-public-speaking
#26
JOURNAL ARTICLE
Efthymia Lamprou, Georgia Koupriza, Argiro Vatakis
Several studies have shown that anxious individuals experience a slower passage of time under threat conditioning. Anxiety-evoking situations have also been proposed to elevate arousal levels, which, in turn, alter one's time percept. However, the effect of social stressors on time perception remains significantly neglected. The current research aimed to investigate the impact of anxiety levels on time estimation and passage of time judgments during public speaking in healthy adults. Participants were recruited from a pool of students that had to give a presentation as part of a university course or their teaching duties...
April 22, 2024: Acta Psychologica
https://read.qxmd.com/read/38653064/deepseq2drug-an-expandable-ensemble-end-to-end-anti-viral-drug-repurposing-benchmark-framework-by-multi-modal-embeddings-and-transfer-learning
#27
JOURNAL ARTICLE
Weidun Xie, Jixiang Yu, Lei Huang, Lek Shyuen For, Zetian Zheng, Xingjian Chen, Yuchen Wang, Zhichao Liu, Chengbin Peng, Ka-Chun Wong
Drug repurposing is promising in multiple scenarios, such as emerging viral outbreak controls and cost reductions of drug discovery. Traditional graph-based drug repurposing methods are limited to fast, large-scale virtual screens, as they constrain the counts for drugs and targets and fail to predict novel viruses or drugs. Moreover, though deep learning has been proposed for drug repurposing, only a few methods have been used, including a group of pre-trained deep learning models for embedding generation and transfer learning...
April 17, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38652948/characterization-and-resistance-mechanism-of-phage-resistant-strains-of-salmonella-enteritidis
#28
JOURNAL ARTICLE
Yukun Zeng, Mangmang Shen, Shenglong Liu, Xin Zhou
In the face of the increasingly severe problem of antibiotic resistance, phage therapy is regarded as a highly potential alternative. Compared with traditional antimicrobial agents, a key research area of phage therapy is the study of phage-resistant mutant bacteria. To effectively monitor and prevent this resistance, it is crucial to conduct in-depth exploration of the mechanism behind phage resistance. In this study, a strain of Salmonella enteritidis (sm140) and the corresponding phage (Psm140) were isolated from chicken liver and sewage, respectively...
April 10, 2024: Poultry Science
https://read.qxmd.com/read/38652826/induction-treatment-for-lupus-nephritis-at-a-high-complexity-hospital-in-chile
#29
JOURNAL ARTICLE
Paulina Ramirez, Andres Giglio, Jorge Verdugo, Francisco Gutierrez
INTRODUCTION: Systemic lupus erythematosus (SLE) causes kidney compromise in up to 40% of patients, contributing significantly to morbidity. Lupus nephritis (LN), an early onset manifestation in most patients, is histologically classified into six types, with types III, IV, and V requiring treatment with induction therapies, usually glucocorticoids with mycophenolate mofetil (MMF) or intravenous cyclophosphamide (IVC). However, up to 60% of patients fail to achieve complete remission, and 27%-66% have subsequent flares...
April 23, 2024: Lupus
https://read.qxmd.com/read/38652808/the-narrow-footprint-of-ancient-balancing-selection-revealed-by-heterokaryon-incompatibility-genes-in-aspergillus-fumigatus
#30
JOURNAL ARTICLE
Ben Auxier, Jianhua Zhang, Francisca Reyes Marquez, Kira Senden, Joost van den Heuvel, Duur K Aanen, Eveline Snelders, Alfons J M Debets
In fungi, fusion between individuals leads to localized cell death, a phenomenon termed heterokaryon incompatibility. Generally, the genes responsible for this incompatibility are observed to be under balancing selection resulting from negative frequency-dependent selection. Here, we assess this phenomenon in Aspergillus fumigatus, a human pathogenic fungus with a very low level of linkage disequilibrium as well as an extremely high crossover rate. Using complementation of auxotrophic mutations as an assay for hyphal compatibility, we screened sexual progeny for compatibility to identify genes involved in this process, called het genes...
April 23, 2024: Molecular Biology and Evolution
https://read.qxmd.com/read/38652712/hgclamir-hypergraph-contrastive-learning-with-attention-mechanism-and-integrated-multi-view-representation-for-predicting-mirna-disease-associations
#31
JOURNAL ARTICLE
Dong Ouyang, Yong Liang, Jinfeng Wang, Le Li, Ning Ai, Junning Feng, Shanghui Lu, Shuilin Liao, Xiaoying Liu, Shengli Xie
Existing studies have shown that the abnormal expression of microRNAs (miRNAs) usually leads to the occurrence and development of human diseases. Identifying disease-related miRNAs contributes to studying the pathogenesis of diseases at the molecular level. As traditional biological experiments are time-consuming and expensive, computational methods have been used as an effective complement to infer the potential associations between miRNAs and diseases. However, most of the existing computational methods still face three main challenges: (i) learning of high-order relations; (ii) insufficient representation learning ability; (iii) importance learning and integration of multi-view embedding representation...
April 2024: PLoS Computational Biology
https://read.qxmd.com/read/38652611/marlens-understanding-multi-agent-reinforcement-learning-for-traffic-signal-control-via-visual-analytics
#32
JOURNAL ARTICLE
Yutian Zhang, Guohong Zheng, Zhiyuan Liu, Quan Li, Haipeng Zeng
The issue of traffic congestion poses a significant obstacle to the development of global cities. One promising solution to tackle this problem is intelligent traffic signal control (TSC). Recently, TSC strategies leveraging reinforcement learning (RL) have garnered attention among researchers. However, the evaluation of these models has primarily relied on fixed metrics like reward and queue length. This limited evaluation approach provides only a narrow view of the model's decision-making process, impeding its practical implementation...
April 23, 2024: IEEE Transactions on Visualization and Computer Graphics
https://read.qxmd.com/read/38652420/proteomics-in-patients-with-fibromyalgia-syndrome-a-systematic-review-of-observational-studies
#33
REVIEW
Arriana Gkouvi, Sotirios G Tsiogkas, Dimitrios P Bogdanos, Helen Gika, Dimitrios G Goulis, Maria G Grammatikopoulou
PURPOSE OF REVIEW: Fibromyalgia syndrome (FMS) is a disease of unknown pathophysiology, with the diagnosis being based on a set of clinical criteria. Proteomic analysis can provide significant biological information for the pathophysiology of the disease but may also reveal biomarkers for diagnosis or therapeutic targets. The present systematic review aims to synthesize the evidence regarding the proteome of adult patients with FMS using data from observational studies. RECENT FINDINGS: An extensive literature search was conducted in MEDLINE/PubMed, CENTRAL, and clinicaltrials...
April 23, 2024: Current Pain and Headache Reports
https://read.qxmd.com/read/38652264/bacterial-discrimination-by-fourier-transform-infrared-spectroscopy-maldi-mass-spectrometry-and-whole-genome-sequencing
#34
JOURNAL ARTICLE
Rachel McGalliard, Howbeer Muhamadali, Najla AlMasoud, Sam Haldenby, Valeria Romero-Soriano, Ellie Allman, Yun Xu, Adam P Roberts, Steve Paterson, Enitan D Carrol, Royston Goodacre
Aim: Proof-of-concept study, highlighting the clinical diagnostic ability of FT-IR compared with MALDI-TOF MS, combined with WGS. Materials & methods: 104 pathogenic isolates of Neisseria meningitidis , Streptococcus pneumoniae , Streptococcus pyogenes and Staphylococcus aureus were analyzed. Results: Overall prediction accuracy was 99.6% in FT-IR and 95.8% in MALDI-TOF-MS. Analysis of N. meningitidis serogroups was superior in FT-IR compared with MALDI-TOF-MS. Phylogenetic relationship of S. pyogenes was similar by FT-IR and WGS, but not S...
April 23, 2024: Future Microbiology
https://read.qxmd.com/read/38651870/controlling-nanoparticle-induced-endothelial-leakiness-with-the-protein-corona
#35
JOURNAL ARTICLE
Aparna Nandakumar, Huayuan Tang, Nicholas Andrikopoulos, John F Quinn, Feng Ding, Pu Chun Ke, Yuhuan Li
Understanding nanoparticle-cell interaction is essential for advancing research in nanomedicine and nanotoxicology. Apart from the transcytotic pathway mediated by cellular recognition and energetics, nanoparticles (including nanomedicines) may harness the paracellular route for their transport by inducing endothelial leakiness at cadherin junctions. This phenomenon, termed as NanoEL, is correlated with the physicochemical properties of the nanoparticles in close association with cellular signalling, membrane mechanics, as well as cytoskeletal remodelling...
April 23, 2024: Nanoscale
https://read.qxmd.com/read/38651858/surgical-anatomy-and-technique-of-peri-insular-hemispherotomy-in-pediatric-epilepsy
#36
JOURNAL ARTICLE
Santiago E Cicutti, Javier F Cuello, Facundo Villamil, Guido P Gromadzyn, Marcelo Bartuluchi
BACKGROUND AND OBJECTIVES: Hemispherotomy is a highly complex procedure that demands a steep learning curve. An incomplete brain disconnection often results in failure of seizure control. The purpose of this article was to present a step-by-step guide to the surgical anatomy of this procedure. It is composed of a 7-stage approach, enhancing access to and improving visualization of deep structures. METHODS: A retrospective analysis of 39 pediatric patients with refractory epilepsy who underwent this technique was conducted...
April 23, 2024: Operative Neurosurgery (Hagerstown, Md.)
https://read.qxmd.com/read/38651848/the-association-between-hidradenitis-suppurativa-and-diet-an-update
#37
JOURNAL ARTICLE
Marko Belamarić, Joško Miše, Zrinka Bukvić Mokos
Hidradenitis suppurativa (HS) is a chronic inflammatory skin condition characterized by painful inflammatory lesions, predominantly affecting areas of the skin rich in apocrine glands, such as inguinal, axillary, submammary, and anogenital regions, with an estimated global prevalence between 1%-4%. The treatment of HS is challenging with various treatment modalities employed to control the disease. Since the condition is chronic and life-impairing, many patients have looked for ways to complement their conventional treatment procedures with non-medical interventions, among which dietary interventions have been of particular interest...
December 2023: Acta Dermatovenerologica Croatica: ADC
https://read.qxmd.com/read/38651534/the-whimsical-nature-of-airway-obstruction-during-drug-induced-sleep-endoscopy
#38
Tice R Harkins, Vasiliki Triantafillou, Everett Seay, Alan R Schwartz, Raj C Dedhia
A 47-year-old male patient diagnosed with severe obstructive sleep apnea (OSA) sought alternatives to positive airway pressure, prompting evaluation with drug-induced sleep endoscopy (DISE). He underwent a specialized DISE with nasal airflow and pharyngeal pressure monitoring. During obstructive apneas, airflow and pressure signals demonstrated dynamic, multilevel upper airway collapse, with shifting sites of airflow obstruction as respiratory effort increased. This case report illustrates how quantitative airflow and pressure measurements can complement the standard DISE exam and aid in surgical decision-making...
April 23, 2024: Laryngoscope
https://read.qxmd.com/read/38651454/eculizumab-treatment-of-massive-hemolysis-occurring-in-a-rare-co-existence-of-paroxysmal-nocturnal-hemoglobinuria-and-myasthenia-gravis
#39
Ráhel Réka Bicskó, Árpád Illés, Zsuzsanna Hevessy, Gergely Ivády, György Kerekes, Gábor Méhes, Tünde Csépány, Lajos Gergely
The co-occurrence of myasthenia gravis (MG) and paroxysmal nocturnal hemoglobinuria (PNH) is rare; only one case has been published so far. We report a 63-year-old Caucasian female patient who was diagnosed with MG at the age of 43. Thymoma was also detected, and so it was surgically resected, which resulted in reasonable disease control for nearly 20 years. Slight hemolysis began to emerge, and then myasthenia symptoms progressed, so immunosuppressive therapy was started. Due to progressive disease and respiratory failure, the patient underwent plasmapheresis, and ventilatory support was stopped...
April 19, 2024: Hematology Reports
https://read.qxmd.com/read/38650878/an-efficient-inoculation-method-to-evaluate-virulence-differentiation-of-field-strains-of-sugarcane-smut-fungus
#40
JOURNAL ARTICLE
Feng Guo, Jiaorong Meng, Ji Huang, Yanfang Yang, Shan Lu, Baoshan Chen
Sugarcane smut, caused by the fungal pathogen Sporisorium scitamineum , is a prominent threat to the sugarcane industry. The development of smut resistant varieties is the ultimate solution for controlling this disease, due to the lack of other efficient control methods. Artificial inoculation method is used to evaluate the virulence differentiation of pathogens. The mostly used artificial inoculation methods are soaking of the seed canes in the teliospore solution and injection of teliospores or haploid sporidia into the sugarcane sprouts...
2024: Frontiers in Microbiology
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