keyword
https://read.qxmd.com/read/38647504/effect-of-changing-the-radiation-dose-range-on-the-in-vitro-cytogenetic-dose-response-to-gamma-rays
#1
JOURNAL ARTICLE
Volodymyr A Vinnikov
PURPOSE: To examine the distortion of the linear quadratic (LQ) model of in vitro cytogenetic dose response over an extended range of γ-ray doses by analyzing the available literature data, and to establish the dose ranges, in which the LQ dose response curve (DRC) can be most accurately fitted for biological dosimetry. MATERIALS AND METHODS: Data on yields of dicentrics (Dic) or dicentrics plus centric rings (Dic + CR) induced in vitro in human lymphocytes by acute γ-rays were extracted from 108 open sources...
April 22, 2024: International Journal of Radiation Biology
https://read.qxmd.com/read/38617299/elucidation-of-the-molecular-mechanism-of-the-breakage-fusion-bridge-bfb-cycle-using-a-crispr-dcas9-cellular-model
#2
Manrose Singh, Kaitlin Raseley, Alexis M Perez, Danny MacKenzie, Settapong T Kosiyatrakul, Sanket Desai, Noelle Batista, Navjot Guru, Katherine K Loomba, Heba Z Abid, Yilin Wang, Lars Udo-Bellner, Randy F Stout, Carl L Schildkraut, Ming Xiao, Dong Zhang
Chromosome instability (CIN) is frequently observed in many tumors. The breakage-fusion-bridge (BFB) cycle has been proposed to be one of the main drivers of CIN during tumorigenesis and tumor evolution. However, the detailed mechanisms for the individual steps of the BFB cycle warrants further investigation. Here, we demonstrated that a nuclease-dead Cas9 (dCas9) coupled with a telomere-specific single-guide RNA (sgTelo) can be used to model the BFB cycle. First, we showed that targeting dCas9 to telomeres using sgTelo impeded DNA replication at telomeres and induced a pronounced increase of replication stress and DNA damage...
April 3, 2024: bioRxiv
https://read.qxmd.com/read/38554341/biodosimetric-analysis-of-head-and-neck-cancer-patients-undergoing-radiotherapy-by-dicentric-chromosome-aberration-assay
#3
JOURNAL ARTICLE
Nayan Agarwal, Arun K Rathi, Seema Kapoor, Kishore Singh, Savita Arora, Ankur Jindal, Kumar Prabhat, Himanshi Kaushik
BACKGROUND: Biodosimetry is the quantification of absorbed radiation dose using biological material obtained from an exposed individual. Radiation can cause different types of chromosomal aberrations, including stable aberrations like translocations and unstable ones like micronuclei, dicentric chromosomes (DC), acentric, and ring forms. Dicentric chromosome assay has become the "gold standard" for cytogenetic biodosimetry due to its reproducibility, specificity (low baseline rates), and sensitivity to low doses...
January 1, 2024: Journal of Cancer Research and Therapeutics
https://read.qxmd.com/read/38449935/hematological-and-cytogenetic-effects-of-x-rays-in-cardiac-unit-workers-and-catheterization-patients
#4
JOURNAL ARTICLE
Haliz Hussein, Asaad Alasady, Khairi Ms Abdullah
Introduction X-rays are widely used in medicine for diagnosis and treatment. Such beneficial uses may cause potentially hazardous situations for patients and workers in the cardiac catheterization laboratory. The present study aims to estimate the radiation dose scattered in different parts of the catheterization units and doses absorbed by workers in this unit, and patients who underwent cardiac catheterization procedures to evaluate all changes in hematological parameters and damaged cells (the cells that contain a number of chromosomal aberrations) after exposure to radiation at Azadi Teaching Hospital in the Duhok City of Iraq...
February 2024: Curēus
https://read.qxmd.com/read/38432778/persons-chronically-exposed-to-low-doses-of-ionizing-radiation-a-cytogenetic-dosimetry-study
#5
JOURNAL ARTICLE
Oksana Cherednichenko, Anastassiya Pilyugina, Serikbai Nuraliev, Dinara Azizbekova
The dosimetry and control of exposure for individuals chronically exposed to ionizing radiation are important and complex issues. Assessment may be optimized by evaluating individual adaptation and radiosensitivity, but it is not possible for a single model to account for all relevant parameters. Our goal was to develop approaches for the calculation of doses for persons chronically exposed to ionizing radiation, taking their radiosensitivities into consideration. On the basis of ex vivo radiation of blood samples, dose-effect models were constructed for dose ranges 0...
2024: Mutation Research. Genetic Toxicology and Environmental Mutagenesis
https://read.qxmd.com/read/38394348/lessons-on-harmonization-of-scoring-criteria-for-dicentric-chromosome-assay-in-south-korea
#6
JOURNAL ARTICLE
Yang Hee Lee, Hyo Jin Yoon, Su San Yang, In Kyung Lee, Wol Soon Jo, Soo Kyung Jeong, Su Jung Oh, Jiin Kim, Younghyun Lee, Ki Moon Seong
PURPOSE: Networking with other biodosimetry laboratories is necessary to assess the radiation exposure of many individuals in large-scale radiological accidents. The Korea biodosimetry network, K-BioDos, prepared harmonized scoring guidelines for dicentric chromosome assay to obtain homogeneous results within the network and investigated the efficiency of the guidelines. MATERIALS AND METHODS: Three laboratories in K-BioDos harmonized the scoring guidelines for dicentric chromosome assay...
February 23, 2024: International Journal of Radiation Biology
https://read.qxmd.com/read/38363591/effects-of-embodiment-in-virtual-reality-for-treatment-of-chronic-pain-pilot-open-label-study
#7
JOURNAL ARTICLE
Adam Saby, Anthony Alvarez, David Smolins, James Petros, Lincoln Nguyen, Michael Trujillo, Oytun Aygün
BACKGROUND: Chronic pain has long been a major health burden that has been addressed through numerous forms of pharmacological and nonpharmacological treatment. One of the tenets of modern medicine is to minimize risk while providing efficacy. Further, because of its noninvasive nature, virtual reality (VR) provides an attractive platform for potentially developing novel therapeutic modalities. OBJECTIVE: The purpose of this study was to determine the feasibility of a novel VR-based digital therapy for the treatment of chronic pain...
February 16, 2024: JMIR Formative Research
https://read.qxmd.com/read/38307027/insights-into-the-mechanisms-and-structure-of-breakage-fusion-bridge-cycles-in-cervical-cancer-using-long-read-sequencing
#8
JOURNAL ARTICLE
Isabel Rodriguez, Nicole M Rossi, Ayse G Keskus, Yi Xie, Tanveer Ahmad, Asher Bryant, Hong Lou, Jesica Godinez Paredes, Rose Milano, Nina Rao, Sonam Tulsyan, Joseph F Boland, Wen Luo, Jia Liu, Tim O'Hanlon, Jazmyn Bess, Vera Mukhina, Daria Gaykalova, Yuko Yuki, Laksh Malik, Kimberley J Billingsley, Cornelis Blauwendraat, Mary Carrington, Meredith Yeager, Lisa Mirabello, Mikhail Kolmogorov, Michael Dean
Cervical cancer is caused by human papillomavirus (HPV) infection, has few approved targeted therapeutics, and is the most common cause of cancer death in low-resource countries. We characterized 19 cervical and four head and neck cancer cell lines using long-read DNA and RNA sequencing and identified the HPV types, HPV integration sites, chromosomal alterations, and cancer driver mutations. Structural variation analysis revealed telomeric deletions associated with DNA inversions resulting from breakage-fusion-bridge (BFB) cycles...
January 25, 2024: American Journal of Human Genetics
https://read.qxmd.com/read/38230457/investigation-of-chromosomal-genetic-characteristics-and-identification-of-structural-variation-in-the-offspring-of-hexaploid-triticale%C3%A3-hexaploid-wheat
#9
JOURNAL ARTICLE
Yang Man-Yu, Yao Fang-Jie, Yang Zu-Jun, Yang En-Nian
Hexaploid triticale is an important genetic resource for genetic improvement of common wheat, which can broaden the genetic basis of wheat. In order to lay a foundation for the subsequent research and utilization of triticale germplasm materials, the chromosomal genetic characteristics of cross and backcross offspring of hexaploid triticale×hexaploid wheat were investigated in the process of transferring rye chromatin from hexaploid triticale to hexaploid wheat. Hybrid and backcross combinations were prepared with hexaploid triticale 16yin171 as the maternal parent and hexaploid wheat Chuanmai62 as the paternal parent...
January 20, 2024: Yi Chuan, Hereditas
https://read.qxmd.com/read/38214379/enhanced-rbe-of-particle-radiation-depends-on-beam-size-in-the-micrometer-range
#10
JOURNAL ARTICLE
K Ilicic, G Dollinger, A Dombrowsky, C Greubel, S Girst, M Sammer, C Siebenwirth, E Schmid, T Friedrich, P Kundrát, W Friedland, M Scholz, S E Combs, T E Schmid, J Reindl
High-linear energy transfer (LET) radiation, such as heavy ions is associated with a higher relative biological effectiveness (RBE) than low-LET radiation, such as photons. Irradiation with low- and high-LET particles differ in the interaction with the cellular matter and therefore in the spatial dose distribution. When a single high-LET particle interacts with matter, it results in doses of up to thousands of gray (Gy) locally concentrated around the ion trajectory, whereas the mean dose averaged over the target, such as a cell nucleus is only in the range of a Gy...
January 12, 2024: Radiation Research
https://read.qxmd.com/read/38165460/dicentric-chromosomes-are-resolved-through-breakage-and-repair-at-their-centromeres
#11
JOURNAL ARTICLE
Diana Cook, Stanislav G Kozmin, Elaine Yeh, Thomas D Petes, Kerry Bloom
Chromosomes with two centromeres provide a unique opportunity to study chromosome breakage and DNA repair using completely endogenous cellular machinery. Using a conditional transcriptional promoter to control the second centromere, we are able to activate the dicentric chromosome and follow the appearance of DNA repair products. We find that the rate of appearance of DNA repair products resulting from homology-based mechanisms exceeds the expected rate based on their limited centromere homology (340 bp) and distance from one another (up to 46...
January 2, 2024: Chromosoma
https://read.qxmd.com/read/38052891/linear-energy-transfer-let-distribution-outside-small-radiotherapy-field-edges-produced-by-6%C3%A2-mv-x-rays
#12
JOURNAL ARTICLE
Y Huerta-Juan, N Xicohténcatl-Hernández, G Massillon-Jl
In modern radiotherapy with photons, the absorbed dose outside the radiation field is generally investigated. But it is well known that the biological damage depends not only on the absorbed dose but also on LET. This work investigated the dose-average LET (LΔ,D ) outside several small radiotherapy fields to provide information that can help for better evaluating the biological effect in organs at risk close to the tumour volume. The electron fluences produced in liquid water by a 6 MV X-rays Varian iX linac were calculated using the EGSnrc Monte Carlo code...
December 6, 2023: Scientific Reports
https://read.qxmd.com/read/37980303/clonal-hematopoiesis-of-a-novel-dic-18-20-clone-following-allogeneic-hematopoietic-stem-cell-transplantation
#13
JOURNAL ARTICLE
Makoto Ito, Nobuaki Fukushima, Tomoki Fujii, Masaya Numata, Shiori Morikawa, Yuma Kawamura, Miyo Goto, Akio Kohno, Nobuhiko Imahashi, Takahiko Yasuda, Masashi Sanada, Yuichi Ishikawa, Hitoshi Kiyoi, Kazutaka Ozeki
A 55-year-old man in first complete remission of acute myeloid leukemia with a normal karyotype underwent allogeneic hematopoietic stem cell transplantation from a human-leukocyte-antigen-matched sibling. Bone marrow examination on day 28 confirmed complete remission, but G-banding analysis revealed a novel chromosomal abnormality, including dic(18;20)(p11.2;q11.2). The patient developed moderate chronic graft-versus-host disease on day 174, and the abnormal clones identified by dic(18;20) significantly increased after that point...
January 2024: International Journal of Hematology
https://read.qxmd.com/read/37919272/double-strand-breaks-induce-inverted-duplication-chromosome-rearrangements-by-a-dna-polymerase-%C3%AE-dependent-mechanism
#14
JOURNAL ARTICLE
Amr M Al-Zain, Mattie R Nester, Iffat Ahmed, Lorraine S Symington
Inverted duplications, also known as foldback inversions, are commonly observed in cancers and are the major class of chromosome rearrangement recovered from yeast cells lacking Mre11 nuclease activity. Foldback priming at DNA double-strand breaks (DSBs) is one mechanism proposed for the generation of inverted duplications. However, the other pathway steps have not been fully elucidated. Here, we show that a DSB induced near natural inverted repeats drives high frequency inverted duplication in Sae2 and Mre11-deficient cells...
November 2, 2023: Nature Communications
https://read.qxmd.com/read/37906155/-genetic-analysis-of-a-rare-case-with-disorder-of-sex-development-due-to-structural-rearrangement-of-y-chromosome
#15
JOURNAL ARTICLE
Manli Mi, Junke Xia, Yaqin Hou, Peng Dai, Yanan Wang, Xiangdong Kong
OBJECTIVE: To explore the genetic basis for a rare case with Disorder of sex development. METHODS: Clinical data of the patient was collected. Chromosomal karyotyping, SRY gene testing, whole exome sequencing (WES), low-coverage massively parallel copy number variation sequencing (CNV-seq), fluorescence in situ hybridization (FISH), and whole genome sequencing (WGS) were carried out. RESULTS: The patient, a 14-year-old female, had manifested short stature and dysplasia of second sex characteristics...
November 10, 2023: Zhonghua Yi Xue Yi Chuan Xue za Zhi, Zhonghua Yixue Yichuanxue Zazhi, Chinese Journal of Medical Genetics
https://read.qxmd.com/read/37892012/deep-neural-network-based-automatic-dicentric-chromosome-detection-using-a-model-pretrained-on-common-objects
#16
JOURNAL ARTICLE
Kangsan Kim, Kwang Seok Kim, Won Il Jang, Seongjae Jang, Gil Tae Hwang, Sang-Keun Woo
Dicentric chromosome assay (DCA) is one of the cytogenetic dosimetry methods where the absorbed dose is estimated by counting the number of dicentric chromosomes, which is a major radiation-induced change in DNA. However, DCA is a time-consuming task and requires technical expertise. In this study, a neural network was applied for automating the DCA. We used YOLOv5, a one-stage detection algorithm, to mitigate these limitations by automating the estimation of the number of dicentric chromosomes in chromosome metaphase images...
October 12, 2023: Diagnostics
https://read.qxmd.com/read/37879308/the-applicability-of-scoring-calyculin-a-induced-premature-chromosome-condensation-pcc-objects-for-dose-assessment-including-for-radiotherapy-patients
#17
JOURNAL ARTICLE
Mingzhu Sun, Jayne Moquet, David Lloyd, Stephen Barnard, Selvakumar Anbalagan, Harriet Steel, Aurore Sommer, Lone Gothard, Navita Somaiah, Elizabeth Ainsbury
As an extension to a previous study, a linear calibration curve covering doses from 0 to 10 Gy was constructed and evaluated in the present study using calyculin A-induced premature chromosome condensation (PCC) by scoring excess PCC objects. The main aim of this study was to assess the applicability of this PCC assay for doses below 2 Gy that are critical for triage categorisation. Two separate blind tests involving a total of 6 doses were carried out. 4 out of 6 dose estimates were within the 95% confidence limits (95%CL) with the other 2 just outside...
October 25, 2023: Cytogenetic and Genome Research
https://read.qxmd.com/read/37794034/genomic-signatures-of-past-and-present-chromosomal-instability-in-barrett-s-esophagus-and-early-esophageal-adenocarcinoma
#18
JOURNAL ARTICLE
Chunyang Bao, Richard W Tourdot, Gregory J Brunette, Chip Stewart, Lili Sun, Hideo Baba, Masayuki Watanabe, Agoston T Agoston, Kunal Jajoo, Jon M Davison, Katie S Nason, Gad Getz, Kenneth K Wang, Yu Imamura, Robert Odze, Adam J Bass, Matthew D Stachler, Cheng-Zhong Zhang
The progression of precancerous lesions to malignancy is often accompanied by increasing complexity of chromosomal alterations but how these alterations arise is poorly understood. Here we perform haplotype-specific analysis of chromosomal copy-number evolution in the progression of Barrett's esophagus (BE) to esophageal adenocarcinoma (EAC) on multiregional whole-genome sequencing data of BE with dysplasia and microscopic EAC foci. We identify distinct patterns of copy-number evolution indicating multigenerational chromosomal instability that is initiated by cell division errors but propagated only after p53 loss...
October 4, 2023: Nature Communications
https://read.qxmd.com/read/37769294/biological-dosimetry-dose-response-curves-for-residents-living-near-nuclear-power-plants-in-south-korea
#19
JOURNAL ARTICLE
Soo Kyung Jeong, Su Jung Oh, Yeong-Rok Kang, HyoJin Kim, Yong Uk Kye, Seong Hun Lee, Chang Geun Lee, Moon-Taek Park, Jeong-Hwa Baek, Joong Sun Kim, Min Ho Jeong, Wol Soon Jo
The purpose of this study was to establish the dose-response curves for biological dosimetry of the Dong Nam Institute of Radiological and Medical Sciences to monitor radiation exposure of local residents in the vicinity of the nuclear power plant. The blood samples of five healthy volunteers were irradiated with gamma ray, and each sample was divided equally for analysis of chromosomal aberrations by Giemsa staining and three-color fluorescence in situ hybridization painting of the triplet (chromosomes #1, #2, and #4)...
2023: Science Progress
https://read.qxmd.com/read/37726322/effects-of-low-dose-ionizing-radiation-on-genomic-instability-in-interventional-radiology-workers
#20
JOURNAL ARTICLE
Dominika Kochanova, Sachin Gulati, Matus Durdik, Lukas Jakl, Pavol Kosik, Milan Skorvaga, Katarina Vrobelova, Katarina Vigasova, Eva Markova, Dusan Salat, Andrej Klepanec, Igor Belyaev
Interventional radiologists are chronically exposed to low-dose ionizing radiation (IR), which may represent a health risk. The aim of the present study was to evaluate genomic instability by analyzing chromosomal aberrations, micronuclei, and 53BP1 DNA repair foci in peripheral blood lymphocytes of radiologists. Based on the IAEA guidelines on biodosimetry using dicentrics, the average protracted whole-body dose in radiologists were estimated. Since preleukemic fusion genes (PFG) are the primary events leading to leukemia, we also studied their presence by RT-qPCR and FISH...
September 19, 2023: Scientific Reports
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