keyword
https://read.qxmd.com/read/38543132/gut-microbiota-metabolites-unveiling-their-role-in-inflammatory-bowel-diseases-and-fibrosis
#1
REVIEW
Francesca Bernardi, Ferdinando D'Amico, Sarah Bencardino, Ilaria Faggiani, Jacopo Fanizza, Alessandra Zilli, Tommaso Lorenzo Parigi, Mariangela Allocca, Silvio Danese, Federica Furfaro
In recent years, there has been a growing focus on the intricate interplay between the gut microbiota and host health, specifically in the context of inflammatory bowel diseases (IBDs). The gut microbiota produces a diverse array of metabolites, influencing the host's immune response and tissue homeostasis. Noteworthy metabolites, such as short-chain fatty acids, bile acids, and indoles, exert significant effects on intestinal inflammation and fibrosis. This review integrates current research findings to clarify the mechanisms through which gut microbiota metabolites contribute to the progression of IBD and fibrosis, offering insights into potential therapeutic targets and strategies for managing these intricate gastrointestinal conditions...
March 7, 2024: Pharmaceuticals
https://read.qxmd.com/read/38530319/serum-fibroblast-growth-factor-19-level-correlates-inversely-with-clinical-and-endoscopic-activity-of-inflammatory-bowel-disease
#2
JOURNAL ARTICLE
Agata Łukawska, Agata Mulak
BACKGROUND: Inflammatory bowel disease (IBD), including ulcerative colitis (UC) and Crohn's disease (CD), is a chronic condition with relapsing-remitting course. Diarrhea and abdominal pain are the most common IBD symptoms. Fibroblast growth factor 19 (FGF19) is an endocrine factor that inhibits hepatic bile acid production and may be used as a diagnostic marker for bile acid malabsorption. OBJECTIVES: To assess serum FGF19 levels in active and inactive phases of IBD and find a potential correlation between FGF19 and disease activity...
March 26, 2024: Advances in Clinical and Experimental Medicine: Official Organ Wroclaw Medical University
https://read.qxmd.com/read/38505982/plasma-bile-acids-in-association-with-crohn-s-disease
#3
JOURNAL ARTICLE
Ali Kiasat, Stefanie Prast-Nielsen, Susanne Rautiainen, Lars Engstrand, Fredrik Andersson, Johan Lindberg, Ina Schuppe-Koistinen, Anna Löf Granström, Ulf O Gustafsson
BACKGROUND: In addition to facilitating lipid digestions, bile acids (BA) are signalling molecules acting on receptors on immune cells and along the gastrointestinal (GI) tract. The aim of this study was to assess if altered bile acid profiles in plasma are associated with Crohn's disease (CD). METHOD: This cross-sectional study included individuals (aged ≥18 years) referred for colonoscopy at a tertiary centre in Stockholm between 2016 and 2019. All participants received bowel preparation, completed a lifestyle questionnaire and provided blood samples for analysis...
March 20, 2024: Scandinavian Journal of Gastroenterology
https://read.qxmd.com/read/38456807/an-update-on-dietary-therapies-in-paediatric-crohn-s-disease
#4
JOURNAL ARTICLE
Konstantinos Gkikas, Vaios Svolos, Bernadette White, Konstantinos Gerasimidis
PURPOSE OF REVIEW: This article provides a literature update on original articles published in the past 18 months (May 2022-November 2023) in the dietary management of paediatric Crohn's disease. RECENT FINDINGS: There is more data to support the use of exclusive enteral nutrition in the management of active Crohn's disease in children. Several food-based dietary therapies have been proposed for the management of Crohn's disease. There is an interest in precision nutritional therapy in Crohn's disease, but current data are scarce...
February 29, 2024: Current Opinion in Clinical Nutrition and Metabolic Care
https://read.qxmd.com/read/38374283/gut-bacteriome-in-inflammatory-bowel-disease-an-update-on-recent-advances
#5
REVIEW
Aditya Bajaj, Manasvini Markandey, Saurabh Kedia, Vineet Ahuja
Inflammatory bowel diseases (IBD) are chronic inflammatory gut disorders, majorly classified as ulcerative colitis and Crohn's disease. The complex, multifactorial etiopathogenesis of IBD involves genetic predisposition, environmental cues, aberrant mucosal immune response and a disturbed gut microbiota. Epidemiological trends, studies in gnotobiotic mice models and genome-wide association studies, identifying genes involved in microbial handling, together mount evidence in support of the gut microbiota playing a pivotal role in IBD pathogenesis...
February 20, 2024: Indian Journal of Gastroenterology: Official Journal of the Indian Society of Gastroenterology
https://read.qxmd.com/read/38366352/thiopurine-metabolite-shunting-in-late-pregnancy-increases-the-risk-of-intrahepatic-cholestasis-of-pregnancy-in-women-with-inflammatory-bowel-disease-and-can-be-managed-with-split-dosing
#6
JOURNAL ARTICLE
Ralley Prentice, Emma Flanagan, Emily Wright, Lani Prideaux, William Connell, Miles Sparrow, Peter De Cruz, Mark Lust, Winita Hardikar, Rimma Goldberg, Sara Vogrin, Kirsten Palmer, Alyson Ross, Megan Burns, Tessa Greeve, Sally Bell
BACKGROUND AND AIMS: The risk of intrahepatic cholestasis of pregnancy (ICP) is increased in thiopurine exposed pregnancies. Thiopurine 'shunting', with a 6-methylmecrcaptopurine (MMP) to 6-thioguanine (TGN) ratio of >11, progresses over pregnancy, and may promote ICP development. We aimed to explore the association between thiopurine exposure and ICP, including the hypothesized impact of thiopurine shunting, and identify risk minimization strategies. METHODS: This prospective multi-centre cohort study compared thiopurine and biologic monotherapy exposed pregnant participants...
February 15, 2024: Journal of Crohn's & Colitis
https://read.qxmd.com/read/38312103/integrated-multi-omics-reveal-gut-microbiota-mediated-bile-acid-metabolism-alteration-regulating-immunotherapy-responses-to-anti-%C3%AE-4%C3%AE-7-integrin-in-crohn-s-disease
#7
JOURNAL ARTICLE
Bing Han, Daiyuan Tang, Xiaodan Lv, Junhua Fan, Shiquan Li, Hui Zhu, Jiatong Zhang, Shang Xu, Xiaofang Xu, Ziqian Huang, Zhixi Huang, Guangfu Lin, Lingling Zhan, Xiaoping Lv
Gut microbiota and related metabolites are both crucial factors that significantly influence how individuals with Crohn's disease respond to immunotherapy. However, little is known about the interplay among gut microbiota, metabolites, Crohn's disease, and the response to anti-α4β7-integrin in current studies. Our research utilized 2,4,6-trinitrobenzene sulfonic acid to induce colitis based on the humanized immune system mouse model and employed a combination of whole-genome shotgun metagenomics and non-targeted metabolomics to investigate immunotherapy responses...
2024: Gut Microbes
https://read.qxmd.com/read/38293325/crohn-s-disease-as-the-intestinal-manifestation-of-pan-lymphatic-dysfunction-an-exploratory-proposal-based-on-basic-and-clinical-data
#8
REVIEW
Yu-Wei Zhou, Yue Ren, Miao-Miao Lu, Ling-Ling Xu, Wei-Xin Cheng, Meng-Meng Zhang, Lin-Ping Ding, Dong Chen, Jian-Guo Gao, Juan Du, Ci-Liang Jin, Chun-Xiao Chen, Yun-Fei Li, Tao Cheng, Peng-Lei Jiang, Yi-Da Yang, Peng-Xu Qian, Peng-Fei Xu, Xi Jin
Crohn's disease (CD) is caused by immune, environmental, and genetic factors. It can involve the entire gastrointestinal tract, and although its prevalence is rapidly increasing its etiology remains unclear. Emerging biological and small-molecule drugs have advanced the treatment of CD; however, a considerable proportion of patients are non-responsive to all known drugs. To achieve a breakthrough in this field, innovations that could guide the further development of effective therapies are of utmost urgency...
January 7, 2024: World Journal of Gastroenterology: WJG
https://read.qxmd.com/read/38289995/crohn-s-disease-associated-pathogenic-mutation-in-the-manganese-transporter-zip8-shifts-the-ileal-and-rectal-mucosal-microbiota-implicating-aberrant-bile-acid-metabolism
#9
JOURNAL ARTICLE
Kristi Briggs, Vartika Tomar, Nicholas Ollberding, Yael Haberman, Arno R Bourgonje, Shixian Hu, Lara Chaaban, Laxmi Sunuwar, Rinse K Weersma, Lee A Denson, Joanna M P Melia
BACKGROUND: A pathogenic mutation in the manganese transporter ZIP8 (A391T; rs13107325) increases the risk of Crohn's disease. ZIP8 regulates manganese homeostasis and given the shared need for metals between the host and resident microbes, there has been significant interest in alterations of the microbiome in carriers of ZIP8 A391T. Prior studies have not examined the ileal microbiome despite associations between ileal disease and ZIP8 A391T. METHODS: Here, we used the Pediatric Risk Stratification Study (RISK)  cohort to perform a secondary analysis of 16S ribosomal RNA gene sequencing data obtained from ileal and rectal mucosa to study associations between ZIP8 A391T carrier status and microbiota composition...
January 30, 2024: Inflammatory Bowel Diseases
https://read.qxmd.com/read/38279309/intestinal-inflammation-and-regeneration-interdigitating-processes-controlled-by-dietary-lipids-in-inflammatory-bowel-disease
#10
REVIEW
Soon Jae Kwon, Muhammad Sohaib Khan, Sang Geon Kim
Inflammatory bowel disease (IBD), including Crohn's disease and ulcerative colitis, is a disease of chronic inflammatory conditions of the intestinal tract due to disturbance of the inflammation and immune system. Symptoms of IBD include abdominal pain, diarrhea, bleeding, reduced weight, and fatigue. In IBD, the immune system attacks the intestinal tract's inner wall, causing chronic inflammation and tissue damage. In particular, interlukin-6 and interlukin-17 act on immune cells, including T cells and macrophages, to amplify the immune responses so that tissue damage and morphological changes occur...
January 21, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38231321/diagnosis-and-pharmacological-management-of-microscopic-colitis-in-geriatric-care
#11
JOURNAL ARTICLE
Ole Haagen Nielsen, Darrell S Pardi
Microscopic colitis, a diagnosis under the umbrella term of inflammatory bowel disease, is a prevalent cause of watery diarrhea, often with symptoms of urgency and bloating, typically observed in older adults aged ≥ 60 years. Its incidence has been reported to exceed those of ulcerative colitis and Crohn's disease in some geographical areas. Although nonpathognomonic endoscopic abnormalities, including changes of the vascular mucosal pattern; mucosal erythema; edema; nodularity; or mucosal defects, e...
January 17, 2024: Drugs & Aging
https://read.qxmd.com/read/38181823/ileitis-promotes-masld-progression-via-bile-acid-modulation-and-enhanced-tgr5-signaling-in-ileal-cd8-t-cells
#12
JOURNAL ARTICLE
Chang Zheng, Lei Wang, Tianhui Zou, Senlin Lian, Jiajing Luo, Yijun Lu, Hanbing Hao, Yuejie Xu, Ying Xiang, Xiaoqi Zhang, Guifang Xu, Xiaoping Zou, Runqiu Jiang
BACKGROUND: Clinical evidence substantiates a link between inflammatory bowel disease (IBD), particularly Crohn's disease (CD), and metabolic dysfunction associated steatotic liver disease (MASLD). This study aims to explore the underlying molecular mechanisms responsible for this association. METHODS: MASLD was induced by administering high-fat and western diets, while IBD was induced using dextran sulfate sodium salt (DSS) and the Il10 KO mice model. The investigation into the role of secondary bile acids (SBA) in ileitis involved employing metagenomic sequencing, conducting metabolomics detection, performing fecal bacterial transplantation, and constructing CD8+ T cell specific gene knockout mice...
January 3, 2024: Journal of Hepatology
https://read.qxmd.com/read/38052229/reverse-metabolomics-for-the-discovery-of-chemical-structures-from-humans
#13
JOURNAL ARTICLE
Emily C Gentry, Stephanie L Collins, Morgan Panitchpakdi, Pedro Belda-Ferre, Allison K Stewart, Marvic Carrillo Terrazas, Hsueh-Han Lu, Simone Zuffa, Tingting Yan, Julian Avila-Pacheco, Damian R Plichta, Allegra T Aron, Mingxun Wang, Alan K Jarmusch, Fuhua Hao, Mashette Syrkin-Nikolau, Hera Vlamakis, Ashwin N Ananthakrishnan, Brigid Boland, Amy Hemperly, Niels Vande Casteele, Frank J Gonzalez, Clary B Clish, Ramnik J Xavier, Hiutung Chu, Erin S Baker, Andrew D Patterson, Rob Knight, Dionicio Siegel, Pieter C Dorrestein
Determining structure and phenotypic context of molecules detected in untargeted metabolomics experiments remains challenging. Here, we present reverse metabolomics as a discovery strategy, where MS/MS spectra are acquired from newly synthesized compounds and searched for in public metabolomics data to uncover phenotypic associations. To demonstrate the concept, we broadly synthesized and explored multiple classes of metabolites in humans - N-acyl amides, fatty acid esters of hydroxy fatty acids, bile acid esters and conjugated bile acids...
December 5, 2023: Nature
https://read.qxmd.com/read/38044504/gut-microbiome-associated-predictors-as-biomarkers-of-response-to-advanced-therapies-in-inflammatory-bowel-disease-a-systematic-review
#14
REVIEW
Susanna Meade, Jeremy Liu Chen Kiow, Cristian Massaro, Gurpreet Kaur, Elizabeth Squirell, Brian Bressler, Genelle Lunken
Loss of response to therapy in inflammatory bowel disease (IBD) has led to a surge in research focusing on precision medicine. Three systematic reviews have been published investigating the associations between gut microbiota and disease activity or IBD therapy. We performed a systematic review to investigate the microbiome predictors of response to advanced therapy in IBD. Unlike previous studies, our review focused on predictors of response to therapy; so the included studies assessed microbiome predictors before the proposed time of response or remission...
December 2023: Gut Microbes
https://read.qxmd.com/read/38037191/altered-bile-acid-and-pouch-microbiota-composition-in-patients-with-chronic-pouchitis
#15
JOURNAL ARTICLE
Priscila Santiago, Kevin P Quinn, Jun Chen, Jessica J Friton, Chad R Rypstra, Purna C Kashyap, Laura E Raffals
BACKGROUND: Patients with ulcerative colitis and total abdominal proctocolectomy with ileal pouch-anal anastomosis have a 50% risk of pouchitis and a 5% to 10% risk of chronic pouchitis. AIMS: The goal of the study was to compare pouch microbiota and stool bile acid composition in patients with chronic pouchitis, chronic pouchitis and primary sclerosing cholangitis, and normal pouch. METHODS: Patients with ulcerative colitis and ileal pouch-anal anastomosis were recruited from March 20, 2014, to August 6, 2019, and categorized into normal pouch, chronic pouchitis, and chronic pouchitis/primary sclerosing cholangitis groups...
November 30, 2023: Inflammatory Bowel Diseases
https://read.qxmd.com/read/38001042/differential-impact-of-smoking-on-methylome-and-transcriptome-in-crohn-s-disease-and-ulcerative-colitis
#16
JOURNAL ARTICLE
Qi Yan Ang, Damian Plichta, Sean Kim, Iris Hyun-A Kim, Sadie Gregory, Yan Xia, Helena Lau, Ramnik Xavier, Ashwin N Ananthakrishnan
BACKGROUND: Smoking is an environmental factor that differentially impacts Crohn's disease (CD) and ulcerative colitis (UC). The mechanism of impact of smoking on disease risk and clinical outcomes remains to be established. METHODS: This study used a prospective cohort of patients with CD or UC. Self-reported smoking status was validated using serum cotinine measurement. We profiled methylation changes in peripheral blood using the Illumina Methylation BeadChip...
November 24, 2023: Inflammatory Bowel Diseases
https://read.qxmd.com/read/37980492/altered-fecal-bile-acid-composition-in-active-ulcerative-colitis
#17
JOURNAL ARTICLE
Stefanie Sommersberger, Stefan Gunawan, Tanja Elger, Tanja Fererberger, Johanna Loibl, Muriel Huss, Arne Kandulski, Sabrina Krautbauer, Martina Müller, Gerhard Liebisch, Christa Buechler, Hauke Christian Tews
BACKGROUND: Disturbed bile acid homeostasis associated with a rise of primary and a decline of secondary bile acids is a consistent finding in inflammatory bowel diseases (IBDs). Whether fecal bile acids may emerge as biomarkers for IBD diagnosis and disease severity is less clear. Our study aimed to identify associations of 18 fecal bile acid species with IBD entity and disease activity. METHODS: Stool samples of 62 IBD patients and 17 controls were collected. Eighteen fecal bile acid species were quantified by LC-MS/MS using stable isotope dilution...
November 18, 2023: Lipids in Health and Disease
https://read.qxmd.com/read/37650887/microbial-and-metabolite-signatures-of-stress-reactivity-in-ulcerative-colitis-patients-in-clinical-remission-predict-clinical-flare-risk
#18
JOURNAL ARTICLE
Jonathan P Jacobs, Jenny S Sauk, Aaron I Ahdoot, Fengting Liang, William Katzka, Hyo Jin Ryu, Ariela Khandadash, Venu Lagishetty, Jennifer S Labus, Bruce D Naliboff, Emeran A Mayer
BACKGROUND: Stress reactivity (SR) is associated with increased risk of flares in ulcerative colitis (UC) patients. Because both preclinical and clinical data support that stress can influence gut microbiome composition and function, we investigated whether microbiome profiles of SR exist in UC. METHODS: Ninety-one UC subjects in clinical and biochemical remission were classified into high and low SR groups by questionnaires. Baseline and longitudinal characterization of the intestinal microbiome was performed by 16S rRNA gene sequencing and fecal and plasma global untargeted metabolomics...
August 31, 2023: Inflammatory Bowel Diseases
https://read.qxmd.com/read/37607912/bile-acid-dependent-transcription-factors-and-chromatin-accessibility-determine-regional-heterogeneity-of-intestinal-antimicrobial-peptides
#19
JOURNAL ARTICLE
Yue Wang, Yanbo Yu, Lixiang Li, Mengqi Zheng, Jiawei Zhou, Haifan Gong, Bingcheng Feng, Xiao Wang, Xuanlin Meng, Yanyan Cui, Yanan Xia, Shuzheng Chu, Lin Lin, Huijun Chang, Ruchen Zhou, Mingjun Ma, Zhen Li, Rui Ji, Ming Lu, Xiaoyun Yang, Xiuli Zuo, Shiyang Li, Yanqing Li
Antimicrobial peptides (AMPs) are important mediators of intestinal immune surveillance. However, the regional heterogeneity of AMPs and its regulatory mechanisms remain obscure. Here, we clarified the regional heterogeneity of intestinal AMPs at the single-cell level, and revealed a cross-lineages AMP regulation mechanism that bile acid dependent transcription factors (BATFs), NR1H4, NR1H3 and VDR, regulate AMPs through a ligand-independent manner. Bile acids regulate AMPs by perturbing cell differentiation rather than activating BATFs signaling...
August 22, 2023: Nature Communications
https://read.qxmd.com/read/37515676/the-interaction-of-bile-acids-and-gut-inflammation-influences-the-pathogenesis-of-inflammatory-bowel-disease
#20
REVIEW
Agostino Di Ciaula, Leonilde Bonfrate, Mohamad Khalil, Piero Portincasa
Bile acids (BA) are amphipathic molecules originating from cholesterol in the liver and from microbiota-driven biotransformation in the colon. In the gut, BA play a key role in fat digestion and absorption and act as potent signaling molecules on the nuclear farnesoid X receptor (FXR) and membrane-associated G protein-coupled BA receptor-1 (GPBAR-1). BA are, therefore, involved in the maintenance of gut barrier integrity, gene expression, metabolic homeostasis, and microbiota profile and function. Disturbed BA homeostasis can activate pro-inflammatory pathways in the gut, while inflammatory bowel diseases (IBD) can induce gut dysbiosis and qualitative and/or quantitative changes of the BA pool...
July 29, 2023: Internal and Emergency Medicine
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