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https://www.readbyqxmd.com/read/28535420/evolutionary-changes-in-defensive-specialized-metabolism-in-the-genus-hordeum
#1
Naoki Ube, Miho Nishizaka, Tsuyoshi Ichiyanagi, Kotomi Ueno, Shin Taketa, Atsushi Ishihara
Plants have developed defensive specialized metabolites over the course of evolution. In the genus Hordeum, which includes the important cereal crop barley, specialized metabolites such as hordatines, benzoxazinones, and gramine have been identified. Hordeum species are classified into four clades, H, Xu, Xa, and I. The presence or absence of defensive specialized metabolites was analyzed in representative Hordeum species that included all of the four clades. In the H clade, Hordeum vulgare accumulated hordatines but not benzoxazinones, whereas H...
May 20, 2017: Phytochemistry
https://www.readbyqxmd.com/read/28535262/developmental-studies-of-maize-infesting-picture-winged-flies-diptera-ulidiidae
#2
Gaurav Goyal, Gregg S Nuessly, Dakshina R Seal, Gary J Steck, John L Capinera, Kenneth J Boote
Eleven species of picture-winged flies (Diptera: Ulidiidae) attack maize (Zea mays L.) in the Americas. Field and laboratory studies were used to determine developmental times on sweet corn ears for the three most common species attacking the crop in the United States, Chaetopsis massyla (Walker), Euxesta eluta Loew, and Euxesta stigmatias Loew. Egg plus larval stage developmental times were evaluated in early Spring and late Fall 2009, and late Spring 2010, by placing newly deposited eggs in protected ears in the field...
May 23, 2017: Environmental Entomology
https://www.readbyqxmd.com/read/28535127/modelling-virus-coinfection-to-inform-management-of-maize-lethal-necrosis-in-kenya
#3
Frank Hilker, Linda Allen, Vrushali Bokil, Cheryl Briggs, Zhilan Feng, Karen A Garrett, Louis Gross, Frédéric Hamelin, Michael J Jeger, Carrie Manore, Alison Power, Margaret Redinbaugh, Megan Rúa, Nik J Cunniffe
Maize lethal necrosis (MLN) has emerged as a serious threat to food security in sub-Saharan Africa. MLN is caused by coinfection with two viruses, maize chlorotic mottle virus (MCMV) and a potyvirus, often sugarcane mosaic virus (SCMV). To better understand dynamics of MLN and to provide insight into disease management, we model the spread of the viruses causing MLN within and between growing seasons. The model allows for transmission via vectors, soil and seeds, as well as exogenous sources of infection. Following model parameterisation, we predict how management affects disease prevalence and crop performance over multiple seasons...
May 23, 2017: Phytopathology
https://www.readbyqxmd.com/read/28534616/microbes-and-the-next-nitrogen-revolution
#4
Ilje Pikaar, Silvio Matassa, Korneel Rabaey, Benjamin Leon Bodirsky, Alexander Popp, Mario Herrero, Willy Verstraete
The Haber Bosch process is among the greatest inventions of the 20th century. It provided agriculture with reactive nitrogen and ultimately mankind with nourishment for a population of 7 billion people. However, the present agricultural practice of growing crops for animal production and human food constitutes a major threat to the sustainability of the planet in terms of reactive nitrogen pollution. In view of the shortage of directly feasible and cost-effective measures to avoid these planetary nitrogen burdens and the necessity to remediate this problem, we foresee the absolute need for, and expect, a revolution in the use of microbes as a source of protein...
May 23, 2017: Environmental Science & Technology
https://www.readbyqxmd.com/read/28534253/evaluating-the-involvement-and-interaction-of-abscisic-acid-and-mirna156-in-the-induction-of-anthocyanin-biosynthesis-in-drought-stressed-plants
#5
REVIEW
Jorge González-Villagra, Leonid V Kurepin, Marjorie M Reyes-Díaz
ABA is involved in anthocyanin synthesis through the regulation of microRNA156, augmenting the level of expression of anthocyanin synthesis-related genes and, therefore, increasing anthocyanin level. Drought stress is the main cause of agricultural crop loss in the world. However, plants have developed mechanisms that allow them to tolerate drought stress conditions. At cellular level, drought stress induces changes in metabolite accumulation, including increases in anthocyanin levels due to upregulation of the anthocyanin biosynthetic pathway...
May 22, 2017: Planta
https://www.readbyqxmd.com/read/28534166/in-silico-identification-and-validation-of-potential-micrornas-in-kinnow-mandarin-citrus-reticulata-blanco
#6
Prashant Mohanpuria, Naveen Duhan, Navraj Kaur Sarao, Manvir Kaur, Mandip Kaur
MicroRNAs (miRNAs) are a large family of 19-25 nucleotides, regulatory, non-coding RNA molecules that control gene expression by cleaving or inhibiting the translation of target gene transcripts in animals and plants. Despite the important functions of miRNAs related to regulation of plant growth and development processes, metabolism, and abiotic and biotic stresses, little is known about the disease-related miRNA. Here, we present a new pipeline for miRNA analysis using expressed sequence tags (ESTs)-based bioinformatics approach in Kinnow mandarin, a commercially important citrus fruit crop...
May 22, 2017: Interdisciplinary Sciences, Computational Life Sciences
https://www.readbyqxmd.com/read/28533895/effects-of-nitrogen-and-tiller-type-on-grain-yield-and-physiological-responses-in-rice
#7
Yang Wang, Jianwei Lu, Tao Ren, Saddam Hussain, Chen Guo, Sen Wang, Rihuan Cong, Xiaokun Li
The increasing food demands from an expanding population necessitate global efforts to increase crop production and ensure food security. The rate of nitrogen (N) fertilizer application is strongly related to crop yield. However, although the application of N fertilizer significantly increases the number of tillers in rice, late emerging tillers usually produce lower yields compared with early emerging tillers. Understanding the physiological constraints of late emerging rice tillers is critical for further increasing rice grain yields...
March 2017: AoB Plants
https://www.readbyqxmd.com/read/28533794/boron-supply-enhances-aluminum-tolerance-in-root-border-cells-of-pea-pisum-sativum-by-interacting-with-cell-wall-pectins
#8
Xue Wen Li, Jia You Liu, Jing Fang, Lin Tao, Ren Fang Shen, Ya Lin Li, Hong Dong Xiao, Ying Ming Feng, Hai Xiang Wen, Jia Hua Guan, Li Shu Wu, Yong Ming He, Heiner E Goldbach, Min Yu
Aluminum (Al) toxicity is the primary factor limiting crop growth in acidic soils. Boron (B) alleviates Al toxicity in plants, which is mainly considered to be due to the formation of Rhamnogalacturonan II-B (RGII-B) complexes, which helps to stabilize the cytoskeleton. It is unclear yet whether this is due to the increasing of net negative charges and/or further mechanisms. Kinetics of Al accumulation and adsorption were investigated using entire cells, cell wall and pectin of root border cells (RBCs) of pea (Pisum sativum), to reveal the mechanism of B in interacting with alkali-soluble and chelator-soluble pectin for an increased Al tolerance in RBCs...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28533789/beans-phaseolus-ssp-as-a-model-for-understanding-crop-evolution
#9
REVIEW
Elena Bitocchi, Domenico Rau, Elisa Bellucci, Monica Rodriguez, Maria L Murgia, Tania Gioia, Debora Santo, Laura Nanni, Giovanna Attene, Roberto Papa
Here, we aim to provide a comprehensive and up-to-date overview of the most significant outcomes in the literature regarding the origin of Phaseolus genus, the geographical distribution of the wild species, the domestication process, and the wide spread out of the centers of origin. Phaseolus can be considered as a unique model for the study of crop evolution, and in particular, for an understanding of the convergent phenotypic evolution that occurred under domestication. The almost unique situation that characterizes the Phaseolus genus is that five of its ∼70 species have been domesticated (i...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28533787/genome-wide-analysis-of-gene-expression-provides-new-insights-into-cold-responses-in-thellungiella-salsuginea
#10
Jiangshan Wang, Quan Zhang, Feng Cui, Lei Hou, Shuzhen Zhao, Han Xia, Jingjing Qiu, Tingting Li, Ye Zhang, Xingjun Wang, Chuanzhi Zhao
Low temperature is one of the major environmental stresses that affects plant growth and development, and leads to decrease in crop yield and quality. Thellungiella salsuginea (salt cress) exhibits high tolerance to chilling, is an appropriate model to investigate the molecular mechanisms of cold tolerance. Here, we compared transcription changes in the roots and leaves of T. salsuginea under cold stress using RNA-seq. We identified 2,782 and 1,430 differentially expressed genes (DEGs) in leaves and roots upon cold treatment, respectively...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28533439/gene-introgression-in-weeds-depends-on-initial-gene-location-in-the-crop-brassica-napus-raphanus-raphanistrum-model
#11
Katarzyna Adamczyk-Chauvat, Sabrina Delaunay, Anne Vannier, Caroline François, Gwenaëlle Thomas, Frédérique Eber, Maryse Lodé, Marie Gilet, Virginie Huteau, Jérôme Morice, Sylvie Nègre, Cyril Falentin, Olivier Coriton, Henri Darmency, Bachar Alrustom, Eric Jenczewski, Mathieu Rousseau-Gueutin, Anne-Marie Chèvre
The effect of gene location within a crop genome on its transfer to a weed genome remains an open question for gene flow assessment. To elucidate this question, we analyzed advanced generations of intergeneric hybrids, derived from an initial pollination of known oilseed rape varieties (Brassica napus, AACC, 2n=38) by a local population of wild radish (Raphanus raphanistrum, RrRr, 2n=18). After five generations of recurrent pollination, 307 G5 plants with a chromosome number similar to wild radish were genotyped using 105 B...
May 22, 2017: Genetics
https://www.readbyqxmd.com/read/28532336/changing-techniques-in-crop-plant-classification-molecularization-at-the-national-institute-of-agricultural-botany-during-the-1980s
#12
Matthew Holmes
Modern methods of analysing biological materials, including protein and DNA sequencing, are increasingly the objects of historical study. Yet twentieth-century taxonomic techniques have been overlooked in one of their most important contexts: agricultural botany. This paper addresses this omission by harnessing unexamined archival material from the National Institute of Agricultural Botany (NIAB), a British plant science organization. During the 1980s the NIAB carried out three overlapping research programmes in crop identification and analysis: electrophoresis, near infrared spectroscopy (NIRS) and machine vision systems...
April 2017: Annals of Science
https://www.readbyqxmd.com/read/28532222/bromuconazole-induced-hepatotoxicity-is-accompanied-by-upregulation-of-pxr-cyp3a1-and-downregulation-of-car-cyp2b1-gene-expression
#13
Doaa H Abdelhady, Mohammed A El-Magd, Zizy I Elbialy, Ayman A Saleh
Despite widespread use of bromuconazole as a pesticide for food crops and fruits, limited studies have been done to evaluate its toxic effects. Here, we evaluated the hepatotoxic effect of bromuconazole using classical toxicological (biochemical analysis and histopathological examination) and gene-based molecular methods. Male rats were treated either orally or topically with bromuconazole at doses equal to no observed adverse effect level (NOAEL) and 1/10 LD50 for 90 days. Bromuconazole increased activities of liver enzymes (ALT, AST, ALP, and ACP), and levels of bilirubin...
May 23, 2017: Toxicology Mechanisms and Methods
https://www.readbyqxmd.com/read/28532149/proteomic-analysis-of-pigeonpea-cajanus-cajan-seeds-reveals-the-accumulation-of-numerous-stress-related-proteins
#14
Hari B Krishnan, Savithry S Natarajan, Nathan W Oehrle, Wesley M Garrett, Omar Darwish
Pigeonpea is one of the major sources of dietary protein for more than a billion people living in South Asia. This hardy legume is often grown in low-input and risk-prone marginal environments. Considerable research effort has been devoted by a global research consortium to develop genomic resources for the improvement of this legume crop. These efforts have resulted in the elucidation of the complete genome sequence of pigeonpea. Despite these developments, little is known about seed proteome of this important crop...
May 22, 2017: Journal of Agricultural and Food Chemistry
https://www.readbyqxmd.com/read/28531950/modelling-pesticides-volatilisation-in-greenhouses-sensitivity-analysis-of-a-modified-pearl-model
#15
Michael Houbraken, Kim Doan Ngoc, Frederik van den Berg, Pieter Spanoghe
BACKGROUND: The application of the existing PEARL model was extended to include estimations of the concentration of crop protection products in greenhouse (indoor) air due to volatilisation from the plant surface. The model was modified to include the processes of ventilation of the greenhouse air to the outside atmosphere and transformation in the air. RESULTS: A sensitivity analysis of the model was performed by varying selected input parameters on a one-by-one basis and comparing the model outputs with the outputs of the reference scenarios...
May 17, 2017: Science of the Total Environment
https://www.readbyqxmd.com/read/28531917/assessing-phytotoxicity-of-trace-element-contaminated-soils-phytomanaged-with-gentle-remediation-options-at-ten-european-field-trials
#16
Celestino Quintela-Sabarís, Lilian Marchand, Petra S Kidd, Wolfgang Friesl-Hanl, Markus Puschenreiter, Jurate Kumpiene, Ingo Müller, Silke Neu, Jolien Janssen, Jaco Vangronsveld, Ioannis Dimitriou, Grzegorz Siebielec, Rafał Gałązka, Valérie Bert, Rolf Herzig, Andrew B Cundy, Nadège Oustrière, Aliaksandr Kolbas, William Galland, Michel Mench
Gentle remediation options (GRO), i.e. in situ stabilisation, (aided) phytoextraction and (aided) phytostabilisation, were implemented at ten European sites contaminated with trace elements (TE) from various anthropogenic sources: mining, atmospheric fallout, landfill leachates, wood preservatives, dredged-sediments, and dumped wastes. To assess the performance of the GRO options, topsoil was collected from each field trial, potted, and cultivated with lettuce (Lactuca sativa L.) for 48days. Shoot dry weight (DW) yield, photosynthesis efficiency and major element and TE concentrations in the soil pore water and lettuce shoots were measured...
May 16, 2017: Science of the Total Environment
https://www.readbyqxmd.com/read/28531851/comparative-life-cycle-assessment-study-on-environmental-impact-of-oil-production-from-micro-algae-and-terrestrial-oilseed-crops
#17
S Jez, D Spinelli, A Fierro, A Dibenedetto, M Aresta, E Busi, R Basosi
In this study the LCA methodology is applied in order to satisfy two goals: i) to evaluate the hot spots in site-specific production chain of biodiesel from terrestrial and micro-algae feedstock; ii) to compare quantitatively, utilizing primary data, the impacts of the first generation in respect to the third generation bio-fuels. Results show that micro-algae are neither competitive yet with traditional oil crops nor with fossil fuel. The use of renewable technologies as photovoltaics and biogas self production might increase the competitiveness of micro-algae oil...
May 10, 2017: Bioresource Technology
https://www.readbyqxmd.com/read/28531662/microencapsulation-of-gulosibacter-molinativorax-on4-t-cells-by-a-spray-drying-process-using-different-biopolymers
#18
Berta N Estevinho, A Rita Lopes, Vera Sousa, Fernando Rocha, Olga C Nunes
Molinate is a thiocarbamate herbicide used in rice crop protection. As other pesticides, molinate is a recognized environmental pollutant and bio-accumulated by some wildlife forms. Gulosibacter molinativorax ON4(T) is able to hydrolyse molinate into metabolites which are further degraded by other un-related bacteria. Hence, it can be used in molinate bioremediation processes. The aim of this work was to investigate the possibility of producing G. molinativorax ON4(T) microparticles, using different non-toxic biopolymers (arabic gum, modified chitosan, calcium alginate and sodium alginate) as encapsulating agents by a spray-drying process...
May 11, 2017: Journal of Hazardous Materials
https://www.readbyqxmd.com/read/28531554/efficacy-of-bacillus-subtilis-and-bacillus-amyloliquefaciens-in-the-control-of-aspergillus-parasiticus-growth-and-aflatoxins-production-on-pistachio
#19
Fatemeh Siahmoshteh, Ilenia Siciliano, Houda Banani, Zohreh Hamidi-Esfahani, Mehdi Razzaghi-Abyaneh, Maria Lodovica Gullino, Davide Spadaro
Pistachio (Pistacia vera) is an important nut for its economic, nutritional and health aspects but it can be contaminated by aflatoxigenic fungi in the field and during storage. Biological control could be considered as an alternative to chemical treatment. In this study, we evaluated the antifungal and anti-mycotoxigenic capability of two Bacillus spp. both in vitro and on pistachio kernels. In in vitro conditions, both strains were able to reduce the mycelial growth and they were able to degrade the four aflatoxins during the first three days after inoculation...
May 15, 2017: International Journal of Food Microbiology
https://www.readbyqxmd.com/read/28531195/livestock-metabolomics-and-the-livestock-metabolome-a-systematic-review
#20
Seyed Ali Goldansaz, An Chi Guo, Tanvir Sajed, Michael A Steele, Graham S Plastow, David S Wishart
Metabolomics uses advanced analytical chemistry techniques to comprehensively measure large numbers of small molecule metabolites in cells, tissues and biofluids. The ability to rapidly detect and quantify hundreds or even thousands of metabolites within a single sample is helping scientists paint a far more complete picture of system-wide metabolism and biology. Metabolomics is also allowing researchers to focus on measuring the end-products of complex, hard-to-decipher genetic, epigenetic and environmental interactions...
2017: PloS One
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