Xingyi Guo, Weiqiang Lin, Wanqing Wen, Jeroen Huyghe, Stephanie Bien, Qiuyin Cai, Tabitha Harrison, Zhishan Chen, Conghui Qu, Jiandong Bao, Jirong Long, Yuan Yuan, Fangqin Wang, Mengqiu Bai, Goncalo R Abecasis, Demetrius Albanes, Sonja I Berndt, Stéphane Bézieau, D Timothy Bishop, Hermann Brenner, Stephan Buch, Andrea Burnett-Hartman, Peter T Campbell, Sergi Castellví-Bel, Andrew T Chan, Jenny Chang-Claude, Stephen J Chanock, Sang Hee Cho, David V Conti, Albert de la Chapelle, Edith Jm Feskens, Steven J Gallinger, Graham G Giles, Phyllis J Goodman, Andrea Gsur, Mark Guinter, Marc J Gunter, Jochen Hampe, Heather Hampel, Richard B Hayes, Michael Hoffmeister, Ellen Kampman, Hyun Min Kang, Temitope O Keku, Hyeong Rok Kim, Loic Le Marchand, Soo Chin Lee, Christopher I Li, Li Li, Annika Lindblom, Noralane Lindor, Roger L Milne, Victor Moreno, Neil Murphy, Polly A Newcomb, Deborah A Nickerson, Kenneth Offit, Rachel Pearlman, Paul D P Pharoah, Elizabeth A Platz, John D Potter, Gad Rennert, Lori C Sakoda, Clemens Schafmayer, Stephanie L Schmit, Robert E Schoen, Fredrick R Schumacher, Martha L Slattery, Yu-Ru Su, Catherine M Tangen, Cornelia M Ulrich, Franzel Jb van Duijnhoven, Bethany Van Guelpen, Kala Visvanathan, Pavel Vodicka, Ludmila Vodickova, Veronika Vymetalkova, Xiaolong Wang, Emily White, Alicja Wolk, Michael O Woods, Graham Casey, Li Hsu, Mark A Jenkins, Stephen B Gruber, Ulrike Peters, Wei Zheng
BACKGROUND AND AIMS: Susceptibility genes and the underlying mechanisms for the majority of risk loci identified by genome-wide association studies (GWAS) for colorectal cancer (CRC) risk remain largely unknown. We conducted a transcriptome-wide association study (TWAS) to identify putative susceptibility genes. METHODS: Gene-expression prediction models were built using transcriptome and genetic data from the 284 normal transverse colon tissues of European descendants from the Genotype-Tissue Expression (GTEx), and model performance was evaluated using data from The Cancer Genome Atlas (TCGA, n = 355)...
October 12, 2020: Gastroenterology