keyword
https://read.qxmd.com/read/38542291/unveiling-prognostic-rna-biomarkers-through-a-multi-cohort-study-in-colorectal-cancer
#21
JOURNAL ARTICLE
Zehwan Kim, Jaebon Lee, Ye Eun Yoon, Jae Won Yun
Because cancer is a leading cause of death and is thought to be caused by genetic errors or genomic instability in many circumstances, there have been studies exploring cancer's genetic basis using microarray and RNA-seq methods, linking gene expression data to patient survival. This research introduces a methodological framework, combining heterogeneous gene expression data, random forest selection, and pathway analysis, alongside clinical information and Cox regression analysis, to discover prognostic biomarkers...
March 14, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38542278/targeting-kras-g12c-mutation-in-colorectal-cancer-a-review-new-arrows-in-the-quiver
#22
REVIEW
Javier Ros, Caterina Vaghi, Iosune Baraibar, Nadia Saoudi González, Marta Rodríguez-Castells, Ariadna García, Adriana Alcaraz, Francesc Salva, Josep Tabernero, Elena Elez
Kirsten rat sarcoma virus oncogene homolog ( KRAS ) is the most frequently mutated oncogene in human cancer. In colorectal cancer (CRC), KRAS mutations are present in more than 50% of cases, and the KRAS glycine-to-cysteine mutation at codon 12 ( KRAS G12C) occurs in up to 4% of patients. This mutation is associated with short responses to standard chemotherapy and worse overall survival compared to non-G12C mutations. In recent years, several KRAS G12C inhibitors have demonstrated clinical activity, although all patients eventually progressed...
March 14, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38539034/her2-positive-metastatic-colorectal-cancer
#23
REVIEW
Hannah R Robinson, Wells A Messersmith, Robert W Lentz
Targeted treatment strategies are available for human epidermal growth factor receptor 2 (HER2)-positive (amplified and/or overexpressed) metastatic colorectal cancer (mCRC), and HER2 testing is indicated in patients with mCRC. At present, standard of care first-line treatment for those with HER2-positive mCRC remains chemotherapy in combination with epidermal growth factor receptor (EGFR) inhibitors or bevacizumab, depending on RAS/BRAF mutational status and tumor sidedness. HER2-targeted agents should be considered for those with RAS/BRAF wild-type disease in subsequent-line treatment and in first-line treatment for patients not appropriate for intensive therapy...
March 28, 2024: Current Treatment Options in Oncology
https://read.qxmd.com/read/38532103/identification-of-unique-rectal-cancer-specific-subtypes
#24
JOURNAL ARTICLE
Batuhan Kisakol, Anna Matveeva, Manuela Salvucci, Alexander Kel, Elizabeth McDonough, Fiona Ginty, Daniel B Longley, Jochen H M Prehn
BACKGROUND: Existing colorectal cancer subtyping methods were generated without much consideration of potential differences in expression profiles between colon and rectal tissues. Moreover, locally advanced rectal cancers at resection often have received neoadjuvant chemoradiotherapy which likely has a significant impact on gene expression. METHODS: We collected mRNA expression profiles for rectal and colon cancer samples (n = 2121). We observed that (i) Consensus Molecular Subtyping (CMS) had a different prognosis in treatment-naïve rectal vs...
March 26, 2024: British Journal of Cancer
https://read.qxmd.com/read/38519391/ongoing-clinical-trials-and-future-research-scenarios-of-circulating-tumor-dna-for-the-treatment-of-metastatic-colorectal-cancer
#25
REVIEW
Laura Roazzi, Giorgio Patelli, Katia Bruna Bencardino, Alessio Amatu, Erica Bonazzina, Federica Tosi, Brunella Amoruso, Anna Bombelli, Sara Mariano, Stefano Stabile, Camillo Porta, Salvatore Siena, Andrea Sartore-Bianchi
Liquid biopsy using circulating tumor DNA (ctDNA) has emerged as a minimally invasive, timely approach to provide molecular diagnosis and monitor tumor evolution in patients with cancer. Since the molecular landscape of metastatic colorectal cancer (mCRC) is substantially heterogeneous and dynamic over space and time, ctDNA holds significant advantages as a biomarker for this disease. Numerous studies have demonstrated that ctDNA broadly recapitulates the molecular profile of the primary tumor and metastases, and have mainly focused on the genotyping of RAS and BRAF, that is propaedeutic for anti-EGFR treatment selection...
February 16, 2024: Clinical Colorectal Cancer
https://read.qxmd.com/read/38503018/dynamic-ctdna-based-analysis-of-drug-resistant-gene-alterations-at-ras-braf-wild-type-metastatic-colorectal-cancer-patients-after-cetuximab-plus-chemotherapy-as-the-first-line-treatment
#26
JOURNAL ARTICLE
Yu-Wen Zhou, Xin Zhao, Lu Ni, Peng Cao, Wei-Bing Leng, Qing Zhu, Hong-Feng Gou, Jiao Zhang, Xiao-Fen Li, Meng Qiu
BACKGROUND: The purpose of this study was to explore the dynamic changes of genomic mutations and their correlations with the efficacy in metastatic colorectal cancer (mCRC) patients treated with cetuximab plus mFOLFOX as the first-line treatment. METHODS: We included mCRC patients from January 2018 to October 2020 as a studied cohort which were treated with cetuximab plus mFOLFOX as first line therapy. Blood samples were collected for circulating tumor DNA (ctDNA) test at three timepoints: before the first-line therapy(baseline), at the time of first-line progression and at the time of second-line progression...
March 18, 2024: International Immunopharmacology
https://read.qxmd.com/read/38502113/molecular-and-clinical-determinants-of-acquired-resistance-and-treatment-duration-for-targeted-therapies-in-colorectal-cancer
#27
JOURNAL ARTICLE
Emily Harrold, Fergus Keane, Henry Walch, Joanne F Chou, Jenna Sinopoli, Silvia Palladino, Duaa H Al-Rawi, Kalyani Chadalavada, Paolo Manca, Sree Chalasani, Jessica Yang, Andrea Cercek, Jinru Shia, Marinela Capanu, Samuel F Bakhoum, Nikolaus Schultz, Walid K Chatila, Rona Yaeger
PURPOSE: Targeted therapies have improved outcomes for patients with metastatic colorectal cancer, but their impact is limited by rapid emergence of resistance. We hypothesized that an understanding of the underlying genetic mechanisms and intrinsic tumor features that mediate resistance to therapy will guide new therapeutic strategies and ultimately allow the prevention of resistance. EXPERIMENTAL DESIGN: We assembled a series of 52 patients with paired pre-treatment and progression samples who received therapy targeting EGFR (n=17), BRAF V600E (n=17), KRAS G12C (n=15), or amplified HER2 (n=3) to identify molecular and clinical factors associated with time on treatment (TOT)...
March 19, 2024: Clinical Cancer Research
https://read.qxmd.com/read/38497279/metabolism-toxicity-and-management-of-fruquintinib-a-novel-drug-for-metastatic-colorectal-cancer
#28
REVIEW
Kanchi Patell, Veronica Lee Mears, Michael H Storandt, Amit Mahipal
INTRODUCTION: Colorectal cancer (CRC) is the third most diagnosed cancer globally and despite therapeutic strides, the prognosis for patients with metastatic disease (mCRC) remains poor. Fruquintinib is an oral vascular endothelial growth factor receptor (VEGFR) tyrosine kinase inhibitor (TKI) targeting VEGFR -1, -2, and -3, and has recently received approval by the U.S. Food and Drug Administration for treatment of mCRC refractory to standard chemotherapy, anti-VEGF therapy, and anti-epidermal growth factor receptor (EGFR) therapy...
March 18, 2024: Expert Opinion on Drug Metabolism & Toxicology
https://read.qxmd.com/read/38494800/-history-and-perspective-of-chemotherapy-in-advanced-esophageal-cancer
#29
JOURNAL ARTICLE
Kazuhiro Shiraishi, Ken Kato
Advanced esophageal carcinoma is one of the diseases with a poor prognosis. CF(cisplatin plus 5-FU)therapy and taxanes( paclitaxel or docetaxel)were considered standard treatments for first- and second-line treatment of advanced esophageal carcinoma based on the results of phase Ⅱ trials, although no randomized controlled trials were conducted. Subsequently, anti-epidermal growth factor receptor(EGFR)inhibitors, which had shown efficacy in head and neck cancer and colorectal cancer, were developed but failed to prolong survival both first- and second-line treatment...
March 2024: Gan to Kagaku Ryoho. Cancer & Chemotherapy
https://read.qxmd.com/read/38491408/integrative-multi-omics-characterization-reveals-sex-differences-in-glioblastoma
#30
JOURNAL ARTICLE
Byunghyun Jang, Dayoung Yoon, Ji Yoon Lee, Jiwon Kim, Jisoo Hong, Harim Koo, Jason K Sa
BACKGROUND: Glioblastoma (GBM) is the most common and lethal primary brain tumor in adults, with limited treatment modalities and poor prognosis. Recent studies have highlighted the importance of considering sex differences in cancer incidence, prognosis, molecular disparities, and treatment outcomes across various tumor types, including colorectal adenocarcinoma, lung adenocarcinoma, and GBM. METHODS: We performed comprehensive analyses of large-scale multi-omics data (genomic, transcriptomic, and proteomic data) from TCGA, GLASS, and CPTAC to investigate the genetic and molecular determinants that contribute to the unique clinical properties of male and female GBM patients...
March 16, 2024: Biology of Sex Differences
https://read.qxmd.com/read/38483988/epidermal-growth-factor-receptor-egfr-is-a-target-of-the-tumor-suppressor-e3-ligase-fbxw7
#31
JOURNAL ARTICLE
Matteo Boretto, Maarten H Geurts, Shashank Gandhi, Ziliang Ma, Nadzeya Staliarova, Martina Celotti, Sangho Lim, Gui-Wei He, Rosemary Millen, Else Driehuis, Harry Begthel, Lidwien Smabers, Jeanine Roodhart, Johan van Es, Wei Wu, Hans Clevers
FBXW7 is an E3 ubiquitin ligase that targets proteins for proteasome-mediated degradation and is mutated in various cancer types. Here, we use CRISPR base editors to introduce different FBXW7 hotspot mutations in human colon organoids. Functionally, FBXW7 mutation reduces EGF dependency of organoid growth by ~10,000-fold. Combined transcriptomic and proteomic analyses revealed increased EGFR protein stability in FBXW7 mutants. Two distinct phosphodegron motifs reside in the cytoplasmic tail of EGFR. Mutations in these phosphodegron motifs occur in human cancer...
March 19, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38473386/recent-advances-in-therapeutic-strategies-to-improve-colorectal-cancer-treatment
#32
REVIEW
William H Gmeiner
Colorectal cancer (CRC) is the second-leading cause of cancer-related mortality worldwide. CRC mortality results almost exclusively from metastatic disease (mCRC) for which systemic chemotherapy is often a preferred therapeutic option. Biomarker-based stratification of mCRC enables the use of precision therapy based on individual tumor mutational profiles. Activating mutations in the RAS/RAF/MAPK pathway downstream of EGFR signaling have, until recently, limited the use of EGFR-targeted therapies for mCRC; however, the development of anti-RAS and anti-RAF therapies together with improved strategies to limit compensatory signaling pathways is resulting in improved survival rates in several highly lethal mCRC sub-types (e...
March 2, 2024: Cancers
https://read.qxmd.com/read/38473349/focus-on-ras-codon-61-mutations-in-metastatic-colorectal-cancer-a-retrospective-analysis
#33
JOURNAL ARTICLE
Francesco Schietroma, Annunziato Anghelone, Giustina Valente, Viria Beccia, Giulia Caira, Alexia Spring, Giovanni Trovato, Armando Di Bello, Anna Ceccarelli, Laura Chiofalo, Serena Perazzo, Maria Bensi, Angelo Minucci, Andrea Urbani, Luigi Maria Larocca, Michele Basso, Carmelo Pozzo, Lisa Salvatore, Maria Alessandra Calegari, Giampaolo Tortora
RAS mutations involving codon 61 are rare in metastatic colorectal cancer (mCRC), accounting for only 1-4%, but they have recently been identified with high frequency in the circulating tumor DNA (ctDNA) of patients with secondary resistance to anti-EGFRs. This retrospective monocentric study aimed to investigate the clinical phenotype and prognostic performance of codon 61 RAS -mutated mCRC. Fifty patients with codon 61 RAS -mutated mCRC treated at our institution between January 2013 and December 2021 were enrolled...
February 29, 2024: Cancers
https://read.qxmd.com/read/38470197/transcriptomic-analysis-and-fusion-gene-identifications-of-midbody-remnants-released-from-colorectal-cancer-cells-reveals-they-are-molecularly-distinct-from-exosomes-and-microparticles
#34
JOURNAL ARTICLE
Wittaya Suwakulsiri, Rong Xu, Alin Rai, Maoshan Chen, Adnan Shafiq, David W Greening, Richard J Simpson
Previously, we reported that human primary (SW480) and metastatic (SW620) colorectal (CRC) cells release three classes of membrane-encapsulated extracellular vesicles (EVs); midbody remnants (MBRs), exosomes (Exos), and microparticles (MPs). We reported that MBRs were molecularly distinct at the protein level. To gain further biochemical insights into MBRs, Exos, and MPs and their emerging role in CRC, we performed, and report here, for the first time, a comprehensive transcriptome and long noncoding RNA sequencing analysis and fusion gene identification of these three EV classes using the next-generation RNA sequencing technique...
March 12, 2024: Proteomics
https://read.qxmd.com/read/38467828/inhibition-of-the-aurka-yap1-axis-is-a-promising-therapeutic-option-for-overcoming-cetuximab-resistance-in-colorectal-cancer-stem-cells
#35
JOURNAL ARTICLE
Anxo Rio-Vilariño, Aiora Cenigaonandia-Campillo, Ana García-Bautista, Pedro A Mateos-Gómez, Marina I Schlaepfer, Laura Del Puerto-Nevado, Oscar Aguilera, Laura García-García, Carlos Galeano, Irene de Miguel, Juana Serrano-López, Natalia Baños, María Jesús Fernández-Aceñero, Juan Carlos Lacal, Enzo Medico, Jesús García-Foncillas, Arancha Cebrián
BACKGROUND: Primary resistance to anti-EGFR therapies affects 40% of metastatic colorectal cancer patients harbouring wild-type RAS/RAF. YAP1 activation is associated with this resistance, prompting an investigation into AURKA's role in mediating YAP1 phosphorylation at Ser397, as observed in breast cancer. METHODS: We used transcriptomic analysis along with in vitro and in vivo models of RAS/RAF wild-type CRC to study YAP1 Ser397 phosphorylation as a potential biomarker for cetuximab resistance...
March 11, 2024: British Journal of Cancer
https://read.qxmd.com/read/38451831/concurrent-nras-braf-variants-in-metastatic-colorectal-cancer-a-tunisian-case-report
#36
JOURNAL ARTICLE
Hayet Douik, Ghada Sahraoui, Mohamed Jemaà, Raoudha Doghri, Lamia Charfi, Karima Mrad
Target therapy for metastatic colorectal cancer needs the determination of KRAS, NRAS, and BRAF mutation status to identify patients resistant to anti-EGFR treatment. RAS genes (KRAS/NRAS) are mutated in 40-60% of metastatic colorectal cancer and BRAF in 5-10%. The presence of a double mutation in RAS and BRAF is rare. Therefore, RAS and BRAF mutations were considered exclusive. Herein, we describe a novel concomitant NRAS/BRAF mutation identified in a series of 865 colorectal cancer patients.
March 5, 2024: Anti-cancer Drugs
https://read.qxmd.com/read/38451823/twelve-month-progression-free-survival-with-sotorasib-and-panitumumab-in-kras-g12c-mutant-metastatic-colorectal-cancer
#37
JOURNAL ARTICLE
Gozde Kavgaci, Omer Dizdar, Suayib Yalcin
Colorectal cancer (CRC) ranks third in global cancer prevalence, with 40% presenting as metastatic colorectal cancer (mCRC). KRAS mutations in mCRC patients confer resistance to anti-EGFR treatments. Promising inhibitors such as sotorasib and adagrasib targeting KRASG12C mutations have demonstrated efficacy. Herein, we present a heavily pretreated mCRC case with a progression-free survival of 12 months with sotorasib and panitumumab. In 2017, a 27-year-old male presented with abdominal pain and received a diagnosis of stage IIIC KRAS G12C mutant CRC...
March 5, 2024: Anti-cancer Drugs
https://read.qxmd.com/read/38444047/design-synthesis-in-silico-molecular-docking-and-admet-studies-of-quinoxaline-isoxazole-piperazine-conjugates-as-egfr-targeting-agents
#38
JOURNAL ARTICLE
Mohammad Imtiyaz Ali, Narasimha Swamy Thirukovela, Gajjela Bharath Kumar, Gouthami Dasari, Vinitha Badithapuram, Ravinder Manchal, Srinivas Bandari
In this paper, we report the synthesis of quinoxaline-isoxazole-piperazine conjugates. The anticancer activity was evaluated against three human cancer cell lines, including MCF-7 (breast), HepG-2 (liver), and HCT-116 (colorectal). The outcomes of the tested compounds 5d, 5e, and 5f have shown more potent activity when compared to the standard drug erlotinib. In a cell survivability test (MCF-10A), three potent compounds (5d, 5e, and 5f) were evaluated against the normal breast cell line, although neither of them displayed any significant cytotoxicity with IC50 values greater than 84 μM...
March 2024: Chemical Biology & Drug Design
https://read.qxmd.com/read/38442645/a-meta-analysis-of-efficacy-and-safety-data-from-head-to-head-first-line-trials-of-epidermal-growth-factor-receptor-inhibitors-versus-bevacizumab-in-adult-patients-with-ras-wild-type-metastatic-colorectal-cancer-by-sidedness
#39
REVIEW
Takayuki Yoshino, Naushin Hooda, Diana Younan, Kei Muro, Kohei Shitara, Volker Heinemann, Bert Howard O'neil, Fernando Rivera Herrero, Marc Peeters, Junpei Soeda, Mina Suh, Heidi Reichert, Khalid Mezzi, Jon Fryzek, Victoria Chia, Marko Rehn, Sebastian Stintzing
The first-line treatment choice of EGFRIs plus doublet chemotherapy vs. bevacizumab plus doublet chemotherapy remains a topic of interest for patients with left-sided RAS WT mCRC. We conducted a systematic literature review and meta-analysis of clinical trial data published between 2015 and 2024. We evaluated the relative efficacy and safety of first-line EGFRIs plus doublet chemotherapy (FOLFIRI or FOLFOX) vs. bevacizumab plus doublet chemotherapy for patients with RAS WT left-sided mCRC, as well as in all- and right-sided tumors...
March 1, 2024: European Journal of Cancer
https://read.qxmd.com/read/38429301/bcl-x-l-inhibitors-enhance-the-apoptotic-efficacy-of-braf-inhibitors-in-braf-v600e-colorectal-cancer
#40
JOURNAL ARTICLE
Laura J Jenkins, Ian Y Luk, Fiona Chionh, Tao Tan, Kristen Needham, Jamieson Ayton, Camilla M Reehorst, Natalia Vukelic, Oliver M Sieber, Dmitri Mouradov, Peter Gibbs, David S Williams, Niall C Tebbutt, Jayesh Desai, Frédéric Hollande, Amardeep S Dhillon, Erinna F Lee, Delphine Merino, W Douglas Fairlie, John M Mariadason
Metastatic BRAFV600E colorectal cancer (CRC) carries an extremely poor prognosis and is in urgent need of effective new treatments. While the BRAFV600E inhibitor encorafenib in combination with the EGFR inhibitor cetuximab (Enc+Cet) was recently approved for this indication, overall survival is only increased by 3.6 months and objective responses are observed in only 20% of patients. We have found that a limitation of Enc+Cet treatment is the failure to efficiently induce apoptosis in BRAFV600E CRCs, despite inducing expression of the pro-apoptotic protein BIM and repressing expression of the pro-survival protein MCL-1...
March 1, 2024: Cell Death & Disease
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