keyword
https://read.qxmd.com/read/38645681/a-mutation-in-the-brassinosteroid-biosynthesis-gene-cpdwf5-disrupts-vegetative-and-reproductive-development-and-the-salt-stress-response-in-squash-cucurbita-pepo
#1
JOURNAL ARTICLE
Sonsoles Alonso, Gustavo Cebrián, Keshav Gautam, Jessica Iglesias-Moya, Cecilia Martínez, Manuel Jamilena
A Cucurbita pepo mutant with multiple defects in growth and development has been identified and characterized. The mutant dwfcp displayed a dwarf phenotype with dark green and shrinking leaves, shortened internodes and petioles, shorter but thicker roots and greater root biomass, and reduced fertility. The causal mutation of the phenotype was found to disrupt gene Cp4.1LG17g04540 , the squash orthologue of the Arabidopsis brassinosteroid (BR) biosynthesis gene DWF5 , encoding for 7-dehydrocholesterol reductase...
April 2024: Horticulture Research
https://read.qxmd.com/read/38638563/igneous-processes-in-the-small-bodies-of-the-solar-system-ii-small-satellites-and-dwarf-planets
#2
REVIEW
Giovanni Leone, Hiroyuki Tanaka
Evidence of hot and cold igneous processes has been reported in small satellites and dwarf planets of the Solar System. Olivine and pyroxenes were detected in the spectral bands of both small satellites and dwarf planets. The aqueously altered form of olivine and serpentine has been detected in the spectrums of Ceres and Miranda hinting at possible hydrothermal processes in their interiors. Once more, the ubiquitous distribution of 26 Al in the planetary nebula, then evolving in the protoplanetary disk, contributed to the primordial widespread heating...
May 17, 2024: IScience
https://read.qxmd.com/read/38638359/low-mutation-rate-of-spontaneous-mutants-enables-detection-of-causative-genes-by-comparing-whole-genome-sequences
#3
JOURNAL ARTICLE
Mao Suganami, Soichi Kojima, Hideki Yoshida, Masaki Mori, Mayuko Kawamura, Eriko Koketsu, Makoto Matsuoka
In the early 1900s, mutation breeding to select varieties with desirable traits using spontaneous mutation was actively conducted around the world, including Japan. In rice, the number of fixed mutations per generation was estimated to be 1.38-2.25. Although this low mutation rate was a major problem for breeding in those days, in the modern era with the development of next-generation sequencing (NGS) technology, it was conversely considered to be an advantage for efficient gene identification. In this paper, we proposed an in silico approach using NGS to compare the whole genome sequence of a spontaneous mutant with that of a closely related strain with a nearly identical genome, to find polymorphisms that differ between them, and to identify the causal gene by predicting the functional variation of the gene caused by the polymorphism...
2024: Frontiers in Plant Science
https://read.qxmd.com/read/38636862/field-evidence-of-brown-carbon-absorption-enhancement-linked-to-organic-nitrogen-formation-in-indo-gangetic-plain
#4
JOURNAL ARTICLE
Vikram Choudhary, Anil Kumar Mandariya, Ran Zhao, Tarun Gupta
Atmospheric brown carbon (BrC), a short-lived climate forcer, absorbs solar radiation and is a substantial contributor to the warming of the Earth's atmosphere. BrC composition, its absorption properties, and their evolution are poorly represented in climate models, especially during atmospheric aqueous events such as fog and clouds. These aqueous events, especially fog, are quite prevalent during wintertime in Indo-Gangetic Plain (IGP) and involve several stages (e.g., activation, formation, and dissipation, etc...
April 16, 2024: Science of the Total Environment
https://read.qxmd.com/read/38635415/barley-yellow-dwarf-virus-gav-17k-protein-disrupts-thiamine-biosynthesis-to-facilitate-viral-infection-in-plants
#5
JOURNAL ARTICLE
Xiaoyu Han, Xue Yang, Siyu Chen, He Wang, Xiaomin Liu, Daowen Wang, Jin Yang, Linlin Chen, Bingjian Sun, Honglian Li, Yan Shi
Thiamine functions as a crucial activator modulating plant health and broad-spectrum stress tolerances. However, the role of thiamine in regulating plant virus infection is largely unknown. Here, we report that the multifunctional 17K protein encoded by barley yellow dwarf virus-GAV (BYDV-GAV) interacted with barley pyrimidine synthase (HvTHIC), a key enzyme in thiamine biosynthesis. HvTHIC was found to be localized in chloroplast via an N-terminal 74-amino acid domain. However, the 17K-HvTHIC interaction restricted HvTHIC targeting to chloroplasts and triggered autophagy-mediated HvTHIC degradation...
April 18, 2024: Plant Journal
https://read.qxmd.com/read/38633131/a-cryptic-syngameon-within-betula-shrubs-revealed-implications-for-conservation-in-changing-subarctic-environments
#6
JOURNAL ARTICLE
Lyne Touchette, Julie Godbout, Manuel Lamothe, Ilga Porth, Nathalie Isabel
Arctic and subarctic ecosystems are rapidly transforming due to global warming, emphasizing the need to understand the genetic diversity and adaptive strategies of northern plant species for effective conservation. This study focuses on Betula glandulosa , a native North American tundra shrub known as dwarf birch, which demonstrates an apparent capacity to adapt to changing climate conditions. To address the taxonomic challenges associated with shrub birches and logistical complexities of sampling in the northernmost areas where species' ranges overlap, we adopted a multicriteria approach...
April 2024: Evolutionary Applications
https://read.qxmd.com/read/38632480/methane-emission-from-a-cool-brown-dwarf
#7
JOURNAL ARTICLE
Jacqueline K Faherty, Ben Burningham, Jonathan Gagné, Genaro Suárez, Johanna M Vos, Sherelyn Alejandro Merchan, Caroline V Morley, Melanie Rowland, Brianna Lacy, Rocio Kiman, Dan Caselden, J Davy Kirkpatrick, Aaron Meisner, Adam C Schneider, Marc Jason Kuchner, Daniella Carolina Bardalez Gagliuffi, Charles Beichman, Peter Eisenhardt, Christopher R Gelino, Ehsan Gharib-Nezhad, Eileen Gonzales, Federico Marocco, Austin James Rothermich, Niall Whiteford
Beyond our Solar System, aurorae have been inferred from radio observations of isolated brown dwarfs1,2 . Within our Solar System, giant planets have auroral emission with signatures across the electromagnetic spectrum including infrared emission of H3 + and methane. Isolated brown dwarfs with auroral signatures in the radio have been searched for corresponding infrared features, but only null detections have been reported3 . CWISEP J193518.59-154620.3. (W1935 for short) is an isolated brown dwarf with a temperature of approximately 482 K...
April 2024: Nature
https://read.qxmd.com/read/38632102/genome-wide-identification-of-grf-transcription-factors-and-their-expression-profile-in-stem-meristem-of-broomcorn-millet-panicum-miliaceum-l
#8
JOURNAL ARTICLE
Wei Heng, Liu Tian-Peng, He Ji-Hong, Dong Kong-Jun, Ren Rui-Yu, Zhang Lei, Li Ya-Wei, Hao Zi-Yi, Yang Tian-Yu
To understand the genome-wide information of the GRF family genes in broomcorn millet and their expression profile in the vegetative meristems, bioinformatic methods and transcriptome sequencing were used to analyze the characteristics, physical and chemical properties, phylogenetic relationship, chromosome distribution, gene structure, cis-acting elements and expression profile in stem meristem for the GRF family members. The results showed that the GRF gene family of millet contains 21 members, and the PmGRF gene is unevenly distributed on 12 chromosomes...
March 20, 2024: Yi Chuan, Hereditas
https://read.qxmd.com/read/38627633/from-buds-to-shoots-insights-into-grapevine-development-from-the-witch-s-broom-bud-sport
#9
JOURNAL ARTICLE
Eleanore J Ritter, Peter Cousins, Michelle Quigley, Aidan Kile, Sunil K Kenchanmane Raju, Daniel H Chitwood, Chad Niederhuth
BACKGROUND: Bud sports occur spontaneously in plants when new growth exhibits a distinct phenotype from the rest of the parent plant. The Witch's Broom bud sport occurs occasionally in various grapevine (Vitis vinifera) varieties and displays a suite of developmental defects, including dwarf features and reduced fertility. While it is highly detrimental for grapevine growers, it also serves as a useful tool for studying grapevine development. We used the Witch's Broom bud sport in grapevine to understand the developmental trajectories of the bud sports, as well as the potential genetic basis...
April 16, 2024: BMC Plant Biology
https://read.qxmd.com/read/38622686/deciphering-the-virome-of-chunkung-cnidium-officinale-showing-dwarfism-like-symptoms-via-a-high-throughput-sequencing-analysis
#10
JOURNAL ARTICLE
Mesele Tilahun Belete, Se Eun Kim, Workitu Firmosa Gudeta, Davaajargal Igori, Jeong A Kwon, Su-Heon Lee, Jae Sun Moon
BACKGROUND: Viruses have notable effects on agroecosystems, wherein they can adversely affect plant health and cause problems (e.g., increased biosecurity risks and economic losses). However, our knowledge of their diversity and interactions with specific host plants in ecosystems remains limited. To enhance our understanding of the roles that viruses play in agroecosystems, comprehensive analyses of the viromes of a wide range of plants are essential. High-throughput sequencing (HTS) techniques are useful for conducting impartial and unbiased investigations of plant viromes, ultimately forming a basis for generating further biological and ecological insights...
April 15, 2024: Virology Journal
https://read.qxmd.com/read/38622229/crispr-cas9-mediated-editing-of-gmdwf1-brassinosteroid-biosynthetic-gene-induces-dwarfism-in-soybean
#11
JOURNAL ARTICLE
Xumin Xiang, Hongli Yang, Xi Yuan, Xue Dong, Sihua Mai, Qianqian Zhang, Limiao Chen, Dong Cao, Haifeng Chen, Wei Guo, Li Li
The study on the GmDWF1-deficient mutant dwf1 showed that GmDWF1 plays a crucial role in determining soybean plant height and yield by influencing the biosynthesis of brassinosteroids. Soybean has not adopted the Green Revolution, such as reduced height for increased planting density, which have proven beneficial for cereal crops. Our research identified the soybean genes GmDWF1a and GmDWF1b, homologous to Arabidopsis AtDWF1, and found that they are widely expressed, especially in leaves, and linked to the cellular transport system, predominantly within the endoplasmic reticulum and intracellular vesicles...
April 15, 2024: Plant Cell Reports
https://read.qxmd.com/read/38618752/dcerf109-regulates-shoot-branching-by-participating-in-strigolactone-signal-transduction-in-dendrobium-catenatum
#12
JOURNAL ARTICLE
Yuliang Han, Juncheng Zhang, Siqi Zhang, Lijun Xiang, Zhonghua Lei, Qixiu Huang, Huizhong Wang, Tao Chen, Maohong Cai
Shoot branching fundamentally influences plant architecture and agricultural yield. However, research on shoot branching in Dendrobium catenatum, an endangered medicinal plant in China, remains limited. In this study, we identified a transcription factor DcERF109 as a key player in shoot branching by regulating the expression of strigolactone (SL) receptors DWARF 14 (D14)/ DECREASED APICAL DOMINANCE 2 (DAD2). The treatment of D. catenatum seedlings with GR24rac /TIS108 revealed that SL can significantly repress the shoot branching in D...
2024: Physiologia Plantarum
https://read.qxmd.com/read/38612925/genome-wide-identification-and-analysis-of-the-ein3-eil-transcription-factor-gene-family-in-doubled-haploid-dh-poplar
#13
JOURNAL ARTICLE
Caixia Liu, Erqin Fan, Yuhang Liu, Meng Wang, Qiuyu Wang, Sui Wang, Su Chen, Chuanping Yang, Xiangling You, Guanzheng Qu
Ethylene (ET) is an important phytohormone that regulates plant growth, development and stress responses. The ethylene-insensitive3/ethylene-insensitive3-like (EIN3/EIL) transcription factor family, as a key regulator of the ET signal transduction pathway, plays an important role in regulating the expression of ET-responsive genes. Although studies of EIN3/EIL family members have been completed in many species, their role in doubled haploid (DH) poplar derived from another culture of diploid Populus simonii × P...
April 8, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38611542/-agrobacterium-mediated-transformation-of-the-dwarf-soybean-minimax
#14
JOURNAL ARTICLE
Min Shao, Kent F McCue, James G Thomson
This study aims to establish an Agrobacterium -mediated transformation system for use with the 'MiniMax'soybean cultivar. MiniMax is a mutant soybean whose growth cycle is around 90 days, half that of most other soybean varieties, making it an optimal model cultivar to test genes of interest before investing in modification of elite lines. We describe an efficient protocol for Agrobacterium -mediated transformation using MiniMax seeds. It uses a modified 'half seed' regeneration protocol for transgenic soybean production, utilizing the rapid generation MiniMax variety to obtain T1 seeds in approximately 145 days...
April 2, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38607416/enhanced-bactericidal-antibiofilm-and-antioxidative-response-of-lawsonia-inermis-leaf-extract-synthesized-zno-nps-loaded-with-commercial-antibiotic
#15
JOURNAL ARTICLE
Balasubramanian Malaikozhundan, Sonaimuthu Mohandoss, Raman Krishnamoorthi, Palanichamy Vidhya Bharathi, Subramanian Palanisamy, Jayaraj Vinodhini
Globally, antibiotic resistance is a challenging issue in healthcare sector. The emergence of multiple drug-resistant bacteria has forced us to modify existing medicines and or formulate newer medicines that are effective and inexpensive. In this perspective, this study involves the formation of zinc oxide nanoparticles (ZnO NPs) by utilizing the Lawsonia inermis (Li) leaf extract. The prepared L. inermis leaf extract mediated ZnO NPs (Li-ZnO NPs) were bio-physically characterized. The antibacterial and radical scavenging effects of Li-ZnO NPs were evaluated...
April 12, 2024: Bioprocess and Biosystems Engineering
https://read.qxmd.com/read/38606442/viral-metatranscriptomic-analysis-to-reveal-the-diversity-of-viruses-infecting-satsuma-mandarin-citrus-unshiu-in-korea
#16
JOURNAL ARTICLE
Hae-Jun Kim, Se-Ryung Choi, In-Sook Cho, Rae-Dong Jeong
Citrus cultivation plays a pivotal role, making a significant contribution to global fruit production and dietary consumption. Accurate identification of viral pathogens is imperative for the effective management of plant viral disease in citrus crops. High-throughput sequencing serves as an alternative approach, enabling comprehensive pathogen identification on a large scale without requiring pre-existing information. In this study, we employed HTS to investigate viral pathogens infecting citrus in three different regions of South Korea: Jejudo (Jeju), Wando-gun (Wando), and Dangjin-si (Dangjin)...
April 2024: Plant Pathology Journal
https://read.qxmd.com/read/38592851/the-receptor-kinases-drus1-and-drus2-behave-distinctly-in-osmotic-stress-tolerance-by-modulating-the-root-system-architecture-via-auxin-signaling
#17
JOURNAL ARTICLE
Ammara Latif, Chen-Guang Yang, Lan-Xin Zhang, Xin-Yu Yang, Xin-Ye Liu, Lian-Feng Ai, Ali Noman, Cui-Xia Pu, Ying Sun
Receptor kinases DRUS1 ( Dwarf and Runtish Spikelet1 ) and DRUS2 are orthologues of the renowned Arabidopsis thaliana gene FERONIA , which play redundant roles in rice growth and development. Whether the two duplicated genes perform distinct functions in response to environmental stress is largely unknown. Here, we found that osmotic stress (OS) and ABA increased DRUS1 expression while decreasing DRUS2 . When subjected to osmotic stress, the increased DRUS1 in drus2 mutants suppresses the OsIAA repressors, resulting in a robust root system with an increased number of adventitious and lateral roots as well as elongated primary, adventitious, and lateral roots, conferring OS tolerance...
March 16, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38592783/nitrogen-application-timing-and-levels-affect-the-fate-and-budget-of-fertilizer-nitrogen-in-the-apple-soil-system
#18
JOURNAL ARTICLE
Fen Wang, Chaoran Wang, Binghao Yang, Xinyu Luo, Gaowei Qi, Fajin Ji, Xinkai Guo, Tao Yang, Xuehui Zhao, Ming Li, Qianqian Jiang, Ling Peng, Hui Cao
This study aimed to determine the effects of the nitrogen (N) application period and level on the fate of fertilizer N and the contribution of N absorption and translocation to apple organ N. Two N application periods (labeled by the 15 N tracer technique in spring and summer, represented by SP and SU, respectively) and three N levels (N0, MN, and HN) were used to determine the physiological indexes and aboveground, root, and soil 15 N content of 4-year-old dwarf ('Red Fuji'/M9T337) and arborized ('Red Fuji'/ Malus hupehensis Rehd...
March 12, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38586075/%C3%AF-two-new-species-of-the-cnemaspisgalaxia-complex-squamata-gekkonidae-from-the-eastern-slopes-of-the-southern-western-ghats
#19
JOURNAL ARTICLE
Akshay Khandekar, Tejas Thackeray, Ishan Agarwal
Two new species allied to Cnemaspisgalaxia are described from the eastern slopes of the south Western Ghats, Tamil Nadu, India. Both new species are members of the ornata subclade within the beddomei clade. The two new species can be easily distinguished from all other members of the beddomei clade and each other by a combination of nonoverlapping morphological characters such as small body size, distinct colouration of both sexes, the number of dorsal tubercles around the body, the number or arrangement of paravertebral tubercles, the number of midventral scales across the belly and longitudinal ventral scales from mental to cloaca, besides uncorrected pairwise ND2 and 16S sequence divergence of ≥ 7...
2024: ZooKeys
https://read.qxmd.com/read/38579721/bifunctional-transcription-factors-slerf-h5-and-h7-activate-cell-wall-and-repress-gibberellin-biosynthesis-genes-in-tomato-via-a-conserved-motif
#20
JOURNAL ARTICLE
Yangang Pei, Qihan Xue, Peng Shu, Weijie Xu, Xiaofei Du, Mengbo Wu, Kaidong Liu, Julien Pirrello, Mondher Bouzayen, Yiguo Hong, Mingchun Liu
The plant cell wall is a dynamic structure that plays an essential role in development, but the mechanism regulating cell wall formation remains poorly understood. We demonstrate that two transcription factors, SlERF.H5 and SlERF.H7, control cell wall formation and tomato fruit firmness in an additive manner. Knockout of SlERF.H5, SlERF.H7, or both genes decreased cell wall thickness, firmness, and cellulose contents in fruits during early development, especially in double-knockout lines. Overexpressing either gene resulted in thicker cell walls and greater fruit firmness with elevated cellulose levels in fruits but severely dwarf plants with lower gibberellin contents...
April 2, 2024: Developmental Cell
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