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Streptomyces coelicolor

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https://www.readbyqxmd.com/read/28487688/gamma-glutamylpolyamine-synthetase-glna3-is-involved-in-the-first-step-of-polyamine-degradation-pathway-in-streptomyces-coelicolor-m145
#1
Sergii Krysenko, Nicole Okoniewski, Andreas Kulik, Arne Matthews, Jan Grimpo, Wolfgang Wohlleben, Agnieszka Bera
Streptomyces coelicolor M145 was shown to be able to grow in the presence of high concentrations of polyamines, such as putrescine, cadaverine, spermidine, or spermine, as a sole nitrogen source. However, hardly anything is known about polyamine utilization and its regulation in streptomycetes. In this study, we demonstrated that only one of the three proteins annotated as glutamine synthetase-like protein, GlnA3 (SCO6962), was involved in the catabolism of polyamines. Transcriptional analysis revealed that the expression of glnA3 was strongly induced by exogenous polyamines and repressed in the presence of ammonium...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28484446/an-alternative-%C3%AF-factor-%C3%AF-8-controls-avermectin-production-and-multiple-stress-responses-in-streptomyces-avermitilis
#2
Di Sun, Qian Wang, Zhi Chen, Jilun Li, Ying Wen
Alternative σ factors in bacteria redirect RNA polymerase to recognize alternative promoters, thereby facilitating coordinated gene expression necessary for adaptive responses. The gene sig8 (sav_741) in Streptomyces avermitilis encodes an alternative σ factor, σ(8), highly homologous to σ(B) in Streptomyces coelicolor. Studies reported here demonstrate that σ(8) is an important regulator of both avermectin production and stress responses in S. avermitilis. σ(8) inhibited avermectin production by indirectly repressing expression of cluster-situated activator gene aveR, and by directly initiating transcription of its downstream gene sav_742, which encodes a direct repressor of ave structural genes...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28463421/aromatic-polyketide-gtri-02-is-a-previously-unidentified-product-of-the-act-gene-cluster-in-streptomyces-coelicolor-a3-2
#3
Changsheng Wu, Koji Ichinose, Young Hae Choi, Gilles P van Wezel
The biosynthesis of aromatic polyketides derived from type II polyketide synthase (PKS) is complex, and it is not uncommon that highly similar gene clusters give rise to diverse structural architectures. The act biosynthetic gene cluster (BGC) of the model actinomycete Streptomyces coelicolor A3(2) is an archetypal type II PKS. Here, we show that the act BGC also specifies the aromatic polyketide GTRI-02 (1), and propose a mechanism for the biogenesis of its 3,4-dihydronaphthalen-1(2H)-one backbone. 1 was also produced by Streptomyces sp...
April 30, 2017: Chembiochem: a European Journal of Chemical Biology
https://www.readbyqxmd.com/read/28461451/a-novel-two-component-system-glur-k-involved-in-glutamate-sensing-and-uptake-in-streptomyces-coelicolor
#4
Lei Li, Weihong Jiang, Yinhua Lu
Two-component systems (TCSs), the predominant signal transduction pathways employed by bacteria, play important roles in physiological metabolism in Streptomyces Here, a novel TCS GluR-K (encoded by SCO5778-5779), which is located divergently from the gluABCD operon encoding a glutamate uptake system, was identified being involved in glutamate sensing and uptake as well as antibiotic biosynthesis in Streptomyces coelicolor Under the minimal medium (MM) supplemented with different concentrations of glutamate, deletion of gluR-K resulted in enhanced ACT but reduced RED and yCPK production, suggesting GluR-K plays a differential role in antibiotic biosynthesis...
May 1, 2017: Journal of Bacteriology
https://www.readbyqxmd.com/read/28455615/enhancement-of-antibiotic-productions-by-engineered-nitrate-utilization-in-actinomycetes
#5
Sitong Meng, Hang Wu, Lei Wang, Buchang Zhang, Linquan Bai
Nitrate is necessary for primary and secondary metabolism of actinomycetes and stimulates the production of a few antibiotics, such as lincomycin and rifamycin. However, the mechanism of this nitrate-stimulating effect was not fully understood. Two putative ABC-type nitrate transporters were identified in Streptomyces lincolnensis NRRL2936 and verified to be involved in lincomycin biosynthesis. With nitrate supplementation, the transcription of nitrogen assimilation genes, nitrate-specific ABC1 transporter genes, and lincomycin exporter gene lmrA was found to be enhanced and positively regulated by the global regulator GlnR, whose expression was also improved...
April 28, 2017: Applied Microbiology and Biotechnology
https://www.readbyqxmd.com/read/28455590/crystal-structure-of-streptomyces-coelicolor-rraas2-an-unusual-member-of-the-rnase-e-inhibitor-rraa-protein-family
#6
Nohra Park, Jihune Heo, Saemee Song, Inseong Jo, Kangseok Lee, Nam-Chul Ha
Bacterial ribonuclease E (RNase E) plays a crucial role in the processing and decay of RNAs. A small protein named RraA negatively regulates the activity of RNase E via protein-protein interaction in various bacteria. Recently, RraAS1 and RraAS2, which are functional homologs of RraA from Escherichia coli, were identified in the Gram-positive species Streptomyces coelicolor. RraAS1 and RraAS2 inhibit RNase ES ribonuclease activity in S. coelicolor. RraAS1 and RraAS2 have a C-terminal extension region unlike typical bacterial RraA proteins...
May 2017: Journal of Microbiology / the Microbiological Society of Korea
https://www.readbyqxmd.com/read/28451186/thioester-reduction-and-aldehyde-transamination-are-universal-steps-in-actinobacterial-polyketide-alkaloid-biosynthesis
#7
U R Awodi, J L Ronan, J Masschelein, E L C de Los Santos, G L Challis
Actinobacteria produce a variety of polyketide alkaloids with unusual structures. Recently, it was shown that a type I modular polyketide synthase (PKS) is involved in the assembly of coelimycin P1, a polyketide alkaloid produced by Streptomyces coelicolor M145. However, the mechanisms for converting the product of the PKS to coelimycin P1 remain to be elucidated. Here we show that the C-terminal thioester reductase (TR) domain of the PKS and an ω-transaminase are responsible for release of the polyketide chain as an aldehyde and its subsequent reductive amination...
January 1, 2017: Chemical Science
https://www.readbyqxmd.com/read/28439624/evidence-for-the-formation-of-scbr-scbr2-heterodimers-and-identification-of-one-of-the-regulatory-targets-in-streptomyces-coelicolor
#8
Xiao Li, Juan Wang, Mingxin Shi, Weishan Wang, Christophe Corre, Keqian Yang
The homologous transcriptional regulators ScbR and ScbR2 have previously been identified as γ-butyrolactone (GBL) and antibiotic receptors, respectively. They regulate diverse physiological processes in Streptomyces coelicolor in response to GBL and antibiotic signals. In this study, ScbR and ScbR2 proteins were shown to interact using a bacterial two-hybrid system where adenylate cyclase activity was reconstituted in Escherichia coli BTH101. These ScbR/ScbR2 interactions in S. coelicolor were then demonstrated by co-immunoprecipitation...
April 24, 2017: Applied Microbiology and Biotechnology
https://www.readbyqxmd.com/read/28425466/crystal-structures-of-the-no-sensor-nsrr-reveal-how-its-iron-sulfur-cluster-modulates-dna-binding
#9
Anne Volbeda, Erin L Dodd, Claudine Darnault, Jason C Crack, Oriane Renoux, Matthew I Hutchings, Nick E Le Brun, Juan C Fontecilla-Camps
NsrR from Streptomyces coelicolor (Sc) regulates the expression of three genes through the progressive degradation of its [4Fe-4S] cluster on nitric oxide (NO) exposure. We report the 1.95 Å resolution crystal structure of dimeric holo-ScNsrR and show that the cluster is coordinated by the three invariant Cys residues from one monomer and, unexpectedly, Asp8 from the other. A cavity map suggests that NO displaces Asp8 as a cluster ligand and, while D8A and D8C variants remain NO sensitive, DNA binding is affected...
April 20, 2017: Nature Communications
https://www.readbyqxmd.com/read/28422240/zwitterionic-pyrrolidene-phosphonates-inhibitors-of-the-glycoside-hydrolase-like-phosphorylase-streptomyces-coelicolor-glgei-v279s
#10
Sri Kumar Veleti, Cecile Petit, Donald R Ronning, Steven J Sucheck
We synthesized and evaluated new zwitterionic inhibitors against glycoside hydrolase-like phosphorylase Streptomyces coelicolor (Sco) GlgEI-V279S which plays a role in α-glucan biosynthesis. Sco GlgEI-V279S serves as a model enzyme for validated anti-tuberculosis (TB) target Mycobacterium tuberculosis (Mtb) GlgE. Pyrrolidine inhibitors 5 and 6 were designed based on transition state considerations and incorporate a phosphonate on the pyrrolidine moiety to expand the interaction network between the inhibitor and the enzyme active site...
May 10, 2017: Organic & Biomolecular Chemistry
https://www.readbyqxmd.com/read/28400129/the-ph-dependent-assembly-of-chaplin-e-from-streptomyces-coelicolor
#11
Mina Dokouhaki, Andrew Hung, Li Day, Sally L Gras
Chaplin E, is one of five self-assembling peptides secreted by Streptomyces coelicolor that assist aerial growth by lowering the surface tension of water. Although the surface activity of a mixture of chaplin peptides has observed to depend on pH, it is unclear how the solvent environment (i.e. pH) influences the structure, assembly and subsequent functionality of these individual peptides. In this study, the conformation and fibril forming propensity of the Chaplin E peptide was assessed as a function of pH using a combination of experimental measurements and molecular dynamics simulations...
April 8, 2017: Journal of Structural Biology
https://www.readbyqxmd.com/read/28389544/engineering-streptomyces-coelicolor-carbonyl-reductase-for-efficient-synthesis-of-atorvastatin-precursor
#12
Min Li, Zhi-Jun Zhang, Xu-Dong Kong, Hui-Lei Yu, Jiahai Zhou, Jian-He Xu
ScCR1 has been shown to be a promising biocatalyst for the synthesis of an atorvastatin precursor, ethyl (S)-4-chloro-3-hydroxybutyrate. However, limitations of ScCR1 observed for practical application include the low activity and poor stability. In this work, protein engineering was employed to improve the catalytic efficiency and stability of ScCR1. At first, the crystal structure of ScCR1 complexed with NADH and co-substrate 2-propanol was solved, and the specific activity of ScCR1 was increased from 38...
April 7, 2017: Applied and Environmental Microbiology
https://www.readbyqxmd.com/read/28348024/regulation-of-sporangium-formation-by-bldd-in-the-rare-actinomycete-actinoplanes-missouriensis
#13
Yoshihiro Mouri, Kenji Konishi, Azusa Fujita, Takeaki Tezuka, Yasuo Ohnishi
The rare actinomycete Actinoplanes missouriensis forms sporangia, including hundreds of flagellated spores that start swimming as zoospores after their release. Under conditions suitable for vegetative growth, zoospores stop swimming and germinate. A comparative proteome analysis between zoospores and germinating cells identified 15 proteins that were produced in larger amounts in germinating cells. They include an orthologue of BldD (AmBldD), which is a transcriptional regulator involved in morphological development and secondary metabolism in Streptomyces AmBldD was detected in mycelia during vegetative growth but was barely detected in mycelia during the sporangium-forming phase, in spite of the constant transcription of AmbldD throughout growth...
March 27, 2017: Journal of Bacteriology
https://www.readbyqxmd.com/read/28343010/structural-and-dynamics-studies-of-the-tetr-family-protein-cprb-from-streptomyces-coelicolor-in-complex-with-its-biological-operator-sequence
#14
Hussain Bhukya, Asis K Jana, Neelanjana Sengupta, Ruchi Anand
In Streptomycetes, tetracycline repressor family of transcription regulators (TetR-FTRs) controls various biological processes including antibiotic biosynthesis, cellular morphology and innate resistance. Here, we focus on understanding the structural basis of transcription regulation by CprB, a member of TetR-FTRs from S. coelicolor. CprB is implicated as a receptor of γ-butyrolactones, a class of quorum sensing molecules, responsible for initiating secondary metabolic pathways. In order to understand the molecular mechanism of DNA recognition, the X-ray structure of CprB in complex with its biological relevant operator sequence was solved to a resolution of 3...
March 22, 2017: Journal of Structural Biology
https://www.readbyqxmd.com/read/28338903/disulfide-bridges-as-essential-elements-for-the-thermostability-of-lytic-polysaccharide-monooxygenase-lpmo10c-from-streptomyces-coelicolor
#15
Magali Tanghe, Barbara Danneels, Matthias Last, Koen Beerens, Ingeborg Stals, Tom Desmet
Lytic polysaccharide monooxygenases (LPMOs) are crucial components of cellulase mixtures but their stability has not yet been studied in detail, let alone been engineered for industrial applications. In this work, we have evaluated the importance of disulfide bridges for the thermodynamic stability of Streptomyces coelicolor LPMO10C. Interestingly, this enzyme was found to retain 34% of its activity after 2-h incubation at 80°C while its apparent melting temperature (Tm) is only 51°C. When its three disulfide bridges were broken, however, irreversible unfolding occurred and no residual activity could be detected after a similar heat treatment...
May 1, 2017: Protein Engineering, Design & Selection: PEDS
https://www.readbyqxmd.com/read/28333098/anti-obesity-and-anti-diabetic-effect-of-neoagarooligosaccharides-on-high-fat-diet-induced-obesity-in-mice
#16
Sun Joo Hong, Je-Hyeon Lee, Eun Joo Kim, Hea Jung Yang, Jae-Seon Park, Soon-Kwang Hong
Neoagarooligosaccharides (NAOs), mainly comprising neoagarotetraose and neoagarohexaose, were prepared by hydrolyzing agar with β-agarase DagA from Streptomyces coelicolor, and the anti-obesity and anti-diabetic effects of NAOs on high-fat diet (HFD)-induced obesity in mice were investigated after NAOs-supplementation for 64 days. Compared to the HFD group, the HFD-0.5 group that was fed with HFD + NAOs (0.5%, w/w) showed remarkable reduction of 36% for body weight gain and 37% for food efficiency ratios without abnormal clinical signs...
March 23, 2017: Marine Drugs
https://www.readbyqxmd.com/read/28331973/green-fluorescent-protein-as-a-reporter-for-the-spatial-and-temporal-expression-of-actiii-in-streptomyces-coelicolor
#17
Fernando Santos-Beneit, Jeff Errington
Polyketides constitute a large group of structurally diverse natural products with useful biological activities. Insights into their biosynthetic mechanisms are crucial for developing new structures. One of the most studied model polyketide is the blue-pigmented antibiotic actinorhodin, produced by Streptomyces coelicolor. This aromatic polyketide is synthesized by minimal type II polyketide synthases and tailoring enzymes. The ActIII actinorhodin ketoreductase is a key tailoring enzyme in actinorhodin biosynthesis...
March 22, 2017: Archives of Microbiology
https://www.readbyqxmd.com/read/28330295/biomass-derived-molecules-modulate-the-behavior-of-streptomyces-coelicolor-for-antibiotic-production
#18
Shashi Kant Bhatia, Bo-Rahm Lee, Ganesan Sathiyanarayanan, Hun Seok Song, Junyoung Kim, Jong-Min Jeon, Jeong-Jun Yoon, Jungoh Ahn, Kyungmoon Park, Yung-Hun Yang
Various chemicals, i.e., furfural, vanillin, 4-hydroxybenzaldehyde and acetate produced during the pretreatment of biomass affect microbial fermentation. In this study, effect of vanillin, 4-hydroxybenzaldehyde and acetate on antibiotic production in Streptomyces coelicolor is investigated. IC 50 value of vanillin, 4-hydroxybenzaldehyde and acetate was recorded as 5, 11.3 and 115 mM, respectively. Vanillin was found as a very effective molecule, and it completely abolished antibiotic (undecylprodigiosin and actinorhodin) production at 1 mM concentration, while 4-hydroxybenzaldehyde and acetate have little effect...
December 2016: 3 Biotech
https://www.readbyqxmd.com/read/28298624/strong-antibiotic-production-is-correlated-with-highly-active-oxidative-metabolism-in-streptomyces-coelicolor-m145
#19
Catherine Esnault, Thierry Dulermo, Aleksey Smirnov, Ahmed Askora, Michelle David, Ariane Deniset-Besseau, Ian-Barry Holland, Marie-Joelle Virolle
The Streptomyces genus is well known for its ability to produce bio-active secondary metabolites of great medical interest. However, the metabolic features accompanying these bio-productions remain to be defined. In this study, the comparison of related model strains producing differing levels of actinorhoddin (ACT), showed that S. lividans, a weak producer, had high TriAcylGlycerol (TAG) content indicative of a glycolytic metabolism. In contrast, the strong producer, S. coelicolor, was characterized by low TAG content, active consumption of its polyphosphate (PolyP) stores and extremely high ATP/ADP ratios...
March 15, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28293039/the-master-regulator-phop-coordinates-phosphate-and-nitrogen-metabolism-respiration-cell-differentiation-and-antibiotic-biosynthesis-comparison-in-streptomyces-coelicolor-and-streptomyces-avermitilis
#20
REVIEW
Juan F Martín, Antonio Rodríguez-García, Paloma Liras
Phosphate limitation is important for production of antibiotics and other secondary metabolites in Streptomyces. Phosphate control is mediated by the two-component system PhoR-PhoP. Following phosphate depletion, PhoP stimulates expression of genes involved in scavenging, transport and mobilization of phosphate, and represses the utilization of nitrogen sources. PhoP reduces expression of genes for aerobic respiration and activates nitrate respiration genes. PhoP activates genes for teichuronic acid formation and reduces expression of genes for phosphate-rich teichoic acid biosynthesis...
March 15, 2017: Journal of Antibiotics
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