keyword
https://read.qxmd.com/read/38642632/leveraging-shape-screening-and-molecular-dynamics-simulations-to-optimize-parp1-specific-chemo-radio-potentiators-for-antitumor-drug-design
#1
JOURNAL ARTICLE
Hifza Khizer, Arooma Maryam, Adnan Ansari, Muhammad Sajjad Ahmad, Rana Rehan Khalid
PARP1 plays a pivotal role in DNA repair within the base excision pathway, making it a promising therapeutic target for cancers involving BRCA mutations. Current study is focused on the discovery of PARP inhibitors with enhanced selectivity for PARP1. Concurrent inhibition of PARP1 with PARP2 and PARP3 affects cellular functions, potentially causing DNA damage accumulation and disrupting immune responses. In step 1, a virtual library of 593 million compounds has been screened using a shape-based screening approach to narrow down the promising scaffolds...
April 18, 2024: Archives of Biochemistry and Biophysics
https://read.qxmd.com/read/38638985/obliteration-of-h-pylori-infection-through-the-development-of-a-novel-thyme-oil-laden-nanoporous-gastric-floating-microsponge
#2
JOURNAL ARTICLE
Mohammed Jafar, Mohd Sajjad Ahmad Khan, Mohammad Jamal Akbar, Hadi Saleem AlSaihaty, Sultan Saad Alasmari
Thyme oil (TO) is a valuable essential oil believed to possess a variety of bioactivities, including antibacterial, anticancer, and antioxidant properties. These attributes grant TO the excellent capability to treat a wide range of diseases, particularly the effective eradication of Helicobacter pylori infection in the stomach. However, its practical use is limited by its low stability under atmospheric conditions. Our current research aims to encapsulate TO in eudragit (EGT) microsponges to enhance its stability and improve its effectiveness against H...
April 30, 2024: Heliyon
https://read.qxmd.com/read/38621559/in-silico-design-of-a-novel-multi-epitope-vaccine-against-hcv-infection-through-immunoinformatics-approaches
#3
JOURNAL ARTICLE
Sajjad Ahmad, Fatemeh Mobini Demneh, Bushra Rehman, Taghreed N Almanaa, Nahid Akhtar, Hamidreza Pazoki-Toroudi, Ali Shojaeian, Mahdi Ghatrehsamani, Samira Sanami
Infection with the hepatitis C virus (HCV) is one of the causes of liver cancer, which is the world's sixth most prevalent and third most lethal cancer. The current treatments do not prevent reinfection; because they are expensive, their usage is limited to developed nations. Therefore, a prophylactic vaccine is essential to control this virus. Hence, in this study, an immunoinformatics method was applied to design a multi-epitope vaccine against HCV. The best B- and T-cell epitopes from conserved regions of the E2 protein of seven HCV genotypes were joined with the appropriate linkers to design a multi-epitope vaccine...
April 13, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38608302/long-term-outcome-of-microvascular-decompression-for-typical-trigeminal-neuralgia-with-autologous-muscle-an-analysis-of-1025-patients-from-a-developing-country
#4
JOURNAL ARTICLE
Mohammad Ashraf, Fauzia Sajjad, Syed Shahzad Hussain, Huzaifa Ahmad Cheema, Sundus Ali, Hira Umar, Conor S Gillespie, Umar Faiz, Abia Shahid, Muhammad Akmal, Naveed Ashraf
OBJECTIVE: The objective was to evaluate the long-term outcome of microvascular decompression (MVD) utilizing autologous muscle for trigeminal neuralgia (TGN). METHODS: A retrospective review was performed of all first-time MVD patients for typical classic TGN without prior surgical intervention who were treated between 2000 and 2019 at a tertiary supraregional neurosurgery practice. Demographic characteristics, surgical findings, operative results, complications, and recurrence rates at 1 year, 5 years, and last follow-up were collected...
April 12, 2024: Journal of Neurosurgery
https://read.qxmd.com/read/38593739/valorization-of-pyrolysis-oils-recycled-from-waste-car-tires-as-potential-collector-in-coal-flotation-production-characterization-and-collecting-mechanism
#5
JOURNAL ARTICLE
Ahmad Rahmanian, Hadi Abdollahi, Faramarz Doulati Ardejani, Hamid Khoshdast, Amirhossein Mohammadzadeh, Sajjad Jannesar Malakooti
The present research study investigates the performance of pyrolysis oils recycled from waste tires as a collector in coal flotation. Three different types of pyrolysis oils (namely, POT1 , POT2 , and POT3 ) were produced through a two-step pressure pyrolysis method followed by an oil rolling process. The characteristics of POTs were adjusted using various oil-modifying additives such as mineral salts and organic solvents. The chemical structure of POTs was explored by employing necessary instrumental analysis techniques, including microwave-assisted acid digestion (MAD), inductively coupled plasma atomic emission spectroscopy (ICP-AES), Fourier-transform infrared spectroscopy (FT-IR), and gas chromatography-mass spectrometry (GC-MS)...
April 8, 2024: Journal of Environmental Management
https://read.qxmd.com/read/38586106/pan-cancer-analysis-of-hs6st2-associations-with-prognosis-tumor-immunity-and-drug-resistance
#6
JOURNAL ARTICLE
Luxin Huang, Sidra Irshad, Ulfat Sultana, Saqib Ali, Ayesha Jamil, Ayesha Zubair, Rizwana Sultan, Mostafa A Abdel-Maksoud, Ayman Mubarak, Bandar M Almunqedhi, Taghreed N Almanaa, Abdul Malik, Abdulaziz Alamri, Ahmad S Kodous, Mohammed Mares, Mohamed Y Zaky, Syeda Saba Sajjad, Yasir Hameed
OBJECTIVES: In this comprehensive study spanning 33 malignancies, we explored the differential expression and prognostic significance of Heparan sulfate 6-O-sulfotransferase 2 (HS6ST2). METHODS: TIMER2, UALCAN, and GEPIA2 were used for the expression analysis. cBioPortal was used for mutational analysis. CancerSEA, STRING, and DAVID, were employed for the single cell sequencing data analysis, protein-protein interaction network development, and gene enrichment analyses, respectively...
2024: American Journal of Translational Research
https://read.qxmd.com/read/38549138/association-between-cytomegalovirus-infection-and-neurological-disorders-a-systematic-review
#7
REVIEW
Samira Sanami, Shahnam Shamsabadi, Amir Dayhimi, Mohammad Pirhayati, Sajjad Ahmad, Ahmadreza Pirhayati, Marjan Ajami, Sara Hemati, Masoud Shirvani, Ahmad Alagha, Davood Abbarin, Akram Alizadeh, Hamidreza Pazoki-Toroudi
Cytomegalovirus (CMV) belongs to the Herpesviridae family and is also known as human herpesvirus type 5. It is a common virus that usually doesn't cause any symptoms in healthy individuals. However, once infected, the virus remains in the host's body for life and can reactivate when the host's immune system weakens. This virus has been linked to several neurological disorders, including Alzheimer's disease, Parkinson's disease, Autism spectrum disorder, Huntington's disease (HD), ataxia, Bell's palsy (BP), and brain tumours, which can cause a wide range of symptoms and challenges for those affected...
May 2024: Reviews in Medical Virology
https://read.qxmd.com/read/38547631/constructing-copper-phthalocyanine-molybdenum-disulfide-cupc-mos-2-s-scheme-heterojunction-with-s-rich-vacancies-for-enhanced-visible-light-photocatalytic-co-2-reduction
#8
JOURNAL ARTICLE
Haider Ali, Min Liu, Sharafat Ali, Ahmad Ali, Pir Muhammad Ismail, Rizwan Ullah, Sajjad Ali, Fazal Raziq, Mohamed Bououdina, Salman Hayat, Usman Ali, Yuanyuan Zhou, Xiaoqiang Wu, Li Zhong, Linyu Zhu, Haiyan Xiao, Pengfei Xia, Liang Qiao
Constructing a heterojunction by combining two semiconductors with similar band structures is a successful approach to obtaining photocatalysts with high efficiency. Herein, a CuPc/DR-MoS2 heterojunction involving copper phthalocyanine (CuPc) and molybdenum disulfide with S-rich vacancies (13.66%) is successfully prepared by the facile hydrothermal method. Experimental results and theoretical calculations firmly demonstrated that photoelectrons exhibit an S-scheme charge transfer mechanism in the CuPc/DR-MoS2 heterojunction...
March 17, 2024: Journal of Colloid and Interface Science
https://read.qxmd.com/read/38486461/network-base-approaches-to-identify-therapeutic-biomarkers-in-hepatocellular-carcinoma-and-search-for-drug-hunting-utilizing-molecular-dynamics-simulations
#9
JOURNAL ARTICLE
Hassan Ayaz, Faisal Ahmad, Sajjad Ahmad, Qaiser Arfan, Abdullah F Alasmari, Farhan Siddique, Bushra Rehman, Adnan Zeb, Sergio Crovella, Syed Shujait Ali, Yasir Waheed, Muhammad Suleman
The presence of conditions like Alpha-1 antitrypsin deficiency, hemochromatosis, non-alcoholic fatty liver diseases and metabolic syndrome can elevate the susceptibility to hepatic cellular carcinoma (HCC). Utilizing network-based gene expression profiling via network analyst tools, presents a novel approach for drug target discovery. The significance level ( p -score) obtained through Cytoscape in the intended center gene survival assessment confirms the identification of all target center genes, which play a fundamental role in disease formation and progression in HCC...
March 14, 2024: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/38468199/impact-of-itpa-gene-polymorphism-for-predicting-anemia-and-treatment-outcome-in-hcv-infected-patients-taking-sofosbuvir-ribavirin-therapy
#10
JOURNAL ARTICLE
Sameen Amjed, Hafiz Ghulam Murtaza Saleem, Sajjad Ullah, Shahzad Latif, Shabana, Junaid Jafar, Ahmad Bilal Waqar
BACKGROUND: Globally, 80 million people are suffering from chronic Hepatitis C virus (HCV) infection. Sofosbuvir ribavirin-based anti-HCV therapy is associated with anemia and other adverse effects. Polymorphisms of Inosine triphosphatase (ITPA) gene may cause functional impairment in the Inosine triphosphate pyrophosphatase enzyme, resulting in enhanced sustained viral response (SVR) and protection from ribavirin-associated anemia in patients on therapy. The study objective was to investigate the effect of Inosine triphosphatase gene polymorphism on SVR achievement, hemoglobin decline and ribavirin dose reduction in patients on therapy...
March 11, 2024: BMC Infectious Diseases
https://read.qxmd.com/read/38462884/should-colour-vision-deficiency-be-a-factor-for-considering-admission-to-nursing-education-programs
#11
JOURNAL ARTICLE
Sumaira Khowaja-Punjwani, Sajjad Ahmad, Samreen Nanji
Null.
March 2024: Journal of the College of Physicians and Surgeons—Pakistan: JCPSP
https://read.qxmd.com/read/38453936/tri-system-integration-in-metal-oxide-nanocomposites-via-in-situ-solution-processed-method-for-ultrathin-flexible-transparent-electrodes
#12
JOURNAL ARTICLE
John Jinwook Kim, Kojima Shuji, Jiawei Zheng, Xinjun He, Ahmad Sajjad, Hong Zhang, Haibin Su, Wallace C H Choy
For stable operation of ultrathin flexible transparent electrodes (uFTEs), it is critical to implement effective risk management during concurrent multi-loading operation of electrical bias and mechanical folding cycles in high-humidity environments. Despite extensive efforts in preparing solution-processed uFTEs with cost-effective and high-throughput means, achieving in-situ nano-adhesion in heterogeneous metal-oxide nanocomposites remains challenging. In this work, we observed by serendipity liquid-like behaviour of transparent metal-oxide-semiconductor zinc oxide nanoparticles (ZnO NPs) onto silver nanowires (Ag NWs) developed by in-situ solution processed method (iSPM)...
March 7, 2024: Nature Communications
https://read.qxmd.com/read/38449997/short-term-outcomes-of-first-100-laparoscopic-colorectal-surgeries-at-a-newly-developed-surgical-setup-at-peshawar
#13
JOURNAL ARTICLE
Muhammad F Shah, Irfan Ul Islam Nasir, Riaz Ahmad, Sajjad Ahmad, Aalia Amjad, Khush Bakht Zaineb, Romana Rehman
BACKGROUND: The incidence of colorectal cancer (CRC) has risen steadily, necessitating innovative strategies for diagnosis and treatment. Minimally invasive surgery, exemplified by laparoscopic techniques, has emerged as a transformative approach in colorectal surgical practices. Laparoscopy offers advantages such as improved aesthetic outcomes, reduced post-operative pain, early patient mobilization, and shorter hospital stays. OBJECTIVE: This study aims to present the short-term surgical outcomes of the first 100 elective laparoscopic CRC resections performed at a newly established tertiary care cancer center in Peshawar, Pakistan...
February 2024: Curēus
https://read.qxmd.com/read/38422823/uncovering-ppar-%C3%AE-agonists-an-integrated-computational-approach-driven-by-machine-learning
#14
JOURNAL ARTICLE
Sajjad Haider, Muhammad Shafiq, Ali Raza Siddiqui, Madiha Sardar, Mamona Mushtaq, Sehrish Shafeeq, Mohammad Nur-E-Alam, Aftab Ahmad, Zaheer Ul-Haq
Peroxisome proliferator-activated receptor gamma (PPAR-γ) serves as a nuclear receptor with a pivotal function in governing diverse facets of metabolic processes. In diabetes, the prime physiological role of PPAR-γ is to enhance insulin sensitivity and regulate glucose metabolism. Although PPAR-γ agonists such as Thiazolidinediones are effective in addressing diabetes complications, it is vital to be mindful that they are associated with substantial side effects that could potentially give rise to health challenges...
February 24, 2024: Journal of Molecular Graphics & Modelling
https://read.qxmd.com/read/38418792/silicon-nanoparticles-loaded-biochar-for-soil-arsenic-immobilization-and-alleviation-of-phytotoxicity-in-barley-implications-for-human-health-risk
#15
JOURNAL ARTICLE
Muhammad Asif Naeem, Abrar Shabbir, Muhammad Imran, Sajjad Ahmad, Muhammad Shahid, Behzad Murtaza, Muhammad Amjad, Waqas-Ud-Din Khan
Arsenic (As)-induced environmental pollution and associated health risks are recognized on a global level. Here the impact of cotton shells derived biochar (BC) and silicon-nanoparticles loaded biochar (nano-Si-BC) was explored on soil As immobilization and its phytotoxicity in barley plants in a greenhouse study. The barley plants were grown in a sandy loam soil with varying concentrations of BC and nano-Si-BC (0, 1, and 2%), along with different levels of As (0, 5, 10, and 20 mg kg-1 ). The FTIR spectroscopy, SEM-EDX, and XRD were used to characterize BC and nano-Si-BC...
February 29, 2024: Environmental Science and Pollution Research International
https://read.qxmd.com/read/38413292/assessment-of-upper-airway-changes-after-interpositional-arthroplasty-a-cephalometric-analysis
#16
JOURNAL ARTICLE
Rizwan Ahmad, Ghulam Sarwar Hashmi, Sajjad Abdur Rahman, Sandhya Maheshwari, Tabishur Rahman, Md Kalim Ansari, Mohammad Danish, Abdus Sami, Mohd Aswad Khan, Faiz Noor Khan Yusufi
This prospective cohort study examined the changes in airway area and soft tissue parameters following interpositional arthroplasty for temporomandibular joint (TMJ) ankylosis. Ten patients with TMJ ankylosis underwent surgery, and preoperative and postoperative skeletal and soft tissue measurements were obtained. A significant rise in soft tissue parameters was observed following surgery, although only minor changes in skeletal parameters were seen. The nasoropharyngeal area, oral area, soft palate area, and tongue area were examined...
December 29, 2023: British Journal of Oral & Maxillofacial Surgery
https://read.qxmd.com/read/38404150/global-analysis-of-urinary-extracellular-vesicle-small-rnas-in-autosomal-dominant-polycystic-kidney-disease
#17
JOURNAL ARTICLE
Hamad Ali, Md Zubbair Malik, Mohamed Abu-Farha, Jehad Abubaker, Preethi Cherian, Rasheeba Nizam, Sindhu Jacob, Yousif Bahbahani, Medhat Naim, Sajjad Ahmad, Mohammad Al-Sayegh, Thangavel Alphonse Thanaraj, Albert C M Ong, Peter C Harris, Fahd Al-Mulla
BACKGROUND: Autosomal dominant polycystic kidney disease (ADPKD) is the most prevalent monogenic renal disease progressing to end-stage renal disease. There is a pressing need for the identification of early ADPKD biomarkers to enable timely intervention and the development of effective therapeutic approaches. Here, we profiled human urinary extracellular vesicles small RNAs by small RNA sequencing in patients with ADPKD and compared their differential expression considering healthy control individuals to identify dysregulated small RNAs and analyze downstream interaction to gain insight about molecular pathophysiology...
February 2024: Journal of Gene Medicine
https://read.qxmd.com/read/38384470/editorial-immunotherapeutics-development-against-hantaviruses
#18
EDITORIAL
Muhammad Tahir Ul Qamar, Sajjad Ahmad, Abbas Khan, Dongqing Wei
No abstract text is available yet for this article.
2024: Frontiers in Immunology
https://read.qxmd.com/read/38380419/emerging-role-of-mesenchymal-stem-cell-derived-extracellular-vesicles-in-periodontal-regeneration
#19
REVIEW
Yaldasadat Anvari, Ahmad Afrashteh, Sajjad Pourkaveh, Samira B Salek, Lelaw Al-Numan, Sahar Khademnezhad
Periodontitis is a prevalent oral ailment that harms both hard and soft tissues of the periodontium, leading to loosening and eventual removal of the teeth. Current clinical treatments have limitations in achieving complete periodontal tissue regeneration. Mesenchymal stem cells (MSCs) have garnered attention due to their unique characteristics and potential as a promising new therapy for periodontitis. Research suggests that the role of MSCs in regenerative medicine primarily occurs through the paracrine pathway, involving the emission of particles encased by lipids called extracellular vesicles (EVs) abundant in bioactive compounds...
April 2024: Journal of Taibah University Medical Sciences
https://read.qxmd.com/read/38288151/functionalization-of-shorea-faguetiana-biochar-using-fe-2-o-3-nanoparticles-and-mxene-for-rapid-removal-of-methyl-blue-and-lead-from-both-single-and-binary-systems
#20
JOURNAL ARTICLE
Aysha Bukhari, Irfan Ijaz, Ammara Nazir, Sajjad Hussain, Hina Zain, Ezaz Gilani, Ahmad A Lfseisi, Hijaz Ahmad
The synthesis of polymeric magnetic composites is a promising strategy for the rapid and efficient treatment of wastewater. Lead and methyl blue are extremely hazardous to living organisms. The sorption of Pb2+ and the dye methyl blue (MB) by biochar is an ecologically sustainable method to remediate this type of water pollution. We functionalized Shorea faguetiana biochar with Fe2 O3 and MXene, resulting in Fe2 O3 /BC/MXene composites with an efficient, rapid, and selective adsorption performance. Based on X-ray photoelectron and Fourier transform infrared spectrometry, we found that the Fe2 O3 /BC/MXene composites had an increased number of surface functional groups (F- , C[double bond, length as m-dash]O, CN, NH, and OH- ) compared with the original biochar...
January 23, 2024: RSC Advances
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