keyword
https://read.qxmd.com/read/15683221/identification-of-cancer-testis-genes-expressed-by-melanoma-and-soft-tissue-sarcoma-using-bioinformatics
#21
JOURNAL ARTICLE
Neil H Segal, Nathalie E Blachere, Jose A Guevara-PatiƱo, Humilidad F Gallardo, Ho Yin A Shiu, Agnes Viale, Cristina R Antonescu, Jedd D Wolchok, Alan N Houghton
Cancer-testis or germ cell antigens (GCAs) are a category of tumor antigens expressed by male germ cells and by cancers of diverse histological origin, but not usually by normal adult somatic tissue. These antigens include products encoded by the MAGE, BAGE, GAGE, SSX, and LAGE/NY-ESO-1 families that encode antigenic peptides recognized by T lymphocytes. In this study, we exploit oligonucleotide technology to identify genes in melanoma and soft tissue sarcoma (STS) that display a cancer-testis/GCA expression profile...
February 1, 2005: Cancer Immunity
https://read.qxmd.com/read/15533723/x-linked-hypoparathyroidism-region-on-xq27-is-evolutionarily-conserved-with-regions-on-3q26-and-13q34-and-contains-a-novel-p-type-atpase
#22
JOURNAL ARTICLE
M Andrew Nesbit, Michael R Bowl, Brian Harding, David Schlessinger, Michael P Whyte, Rajesh V Thakker
X-linked hypoparathyroidism (HPT) has been mapped to a 988-kb region on chromosome Xq27 that contains three genes, MCF2/DBL, SOX3, and U7snRNA homologue, and a partial cDNA, AS6. We isolated the full-length AS6 cDNA, determined its genomic organization, and sought for abnormalities in HPT patients. AS6 was identified as the 3' UTR of ATP11C, a novel member of the P-type ATPases, which consists of 31 exons with alternative transcripts. The colocalization of ATP11C with SOX3 and MCF2/DBL on Xq27 mirrors that of ATP11A with SOX1 and MCF2L on 13q34 and ATP11B with SOX2 on 3q26...
December 2004: Genomics
https://read.qxmd.com/read/14680709/the-insecticidal-toxin-makes-caterpillars-floppy-2-mcf2-shows-similarity-to-hrma-an-avirulence-protein-from-a-plant-pathogen
#23
JOURNAL ARTICLE
Nicholas R Waterfield, Phillip J Daborn, Andrea J Dowling, Guowei Yang, Michelle Hares, Richard H ffrench-Constant
The Photorhabdus luminescens W14 toxin encoding gene makes caterpillars floppy (mcf) was discovered due to its ability to kill caterpillars when expressed in Escherichia coli. Here we describe a homologue of mcf (renamed as mcf1), termed mcf2, discovered in the same genome. The mcf2 gene predicts another large toxin whose central domain, like Mcf1, also shows limited homology to Clostridium cytotoxin B. However, the N-terminus of Mcf2 shows significant similarity to the type-III secreted effector HrmA from the plant pathogen Pseudomonas syringae and no similarity to the N-terminus of Mcf1...
December 12, 2003: FEMS Microbiology Letters
https://read.qxmd.com/read/6092933/new-human-transforming-genes-detected-by-a-tumorigenicity-assay
#24
JOURNAL ARTICLE
O Fasano, D Birnbaum, L Edlund, J Fogh, M Wigler
We have developed a sensitive bioassay for transforming genes based on the tumorigenicity of cotransfected NIH3T3 cells in nude mice. The assay differs substantially from the NIH3T3 focus assay. Using it, we have detected the transfer of three transforming genes from the DNA of MCF-7, a human mammary carcinoma cell line. One of these is N-ras, which is amplified in MCF-7 DNA. The other two, which we have called mcf2 and mcf3, do not appear to be related to known oncogenes. We cannot detect their transfer by using the NIH3T3 focus assay...
September 1984: Molecular and Cellular Biology
https://read.qxmd.com/read/2902799/cytogenetic-and-physical-mapping-in-the-region-of-the-x-chromosome-surrounding-the-fragile-site
#25
JOURNAL ARTICLE
C Nguyen, M G Mattei, J A Rey, M A Baeteman, J F Mattei, B R Jordan
Seven DNA probes have been mapped within the Xq27-Xq28 region using in situ hybridization, in some cases on chromosomes expressing the fragile site to enhance the resolution. To complement these studies and investigate the relationship between genetic, cytogenetic and physical distance some of these probes were used for large scale mapping using pulsed field gels. Physical linkage was demonstrated between two loci, F9 and MCF2, which are separated by less than 270 kb, and a restriction map extending over 1,300 kb has been generated...
May 1988: American Journal of Medical Genetics
https://read.qxmd.com/read/2613238/chromosomal-localization-of-dbl-oncogene-sequences
#26
JOURNAL ARTICLE
S R Tronick, O W McBride, N C Popescu, A Eva
The DBL oncogene was generated by rearrangements involving three discontinuous regions of the human genome. Analyses of panels of human X rodent somatic cell hybrids demonstrated that the DBL proto-oncogene located on the X chromosome (just proximal or distal to bands q26-27.2) underwent recombination at its 5' and 3' ends with sequences derived from chromosomes 3 (p13q-ter) and 16 (p13-q22), respectively. DBL was localized to chromosome Xq27-q28 by in situ hybridization. Another oncogene, MCF2, was previously shown to contain sequences derived from Xq27 as well...
October 1989: Genomics
https://read.qxmd.com/read/2265564/localization-of-the-mouse-mcf-2-dbl-protooncogene-within-a-conserved-linkage-group-on-the-mouse-x-chromosome
#27
JOURNAL ARTICLE
S G Grant, M G Mattei, F Galland, D A Stephenson, B T Keitz, D Birnbaum, V M Chapman
A mouse cDNA probe homologous to the human MCF2 transforming sequence has been identified and partially cloned, and is used here to localize the gene on the mouse X chromosome. The human gene has been physically mapped to within 60 kb of the gene for coagulation factor IX, within a large conserved linkage group between the mouse and human genomes which extends from HPRT to G6PD on the X chromosomes of both mammalian species. In situ hybridization of the mouse Mcf-2 probe onto mouse metaphase chromosomes indicates that this gene lies in the same region of the X chromosome as Cf-9, the mouse gene for coagulation factor IX...
1990: Cytogenetics and Cell Genetics
https://read.qxmd.com/read/2052360/restriction-and-complexity-of-mcf2-proto-oncogene-expression
#28
COMPARATIVE STUDY
F Galland, V Pirisi, O de Lapeyriere, D Birnbaum
MCF2/DBL is an X-linked proto-oncogene encoding a protein with a yet undetermined function. It can be activated in vitro by loss of 5' sequences in NIH3T3 bioassays; in vivo, deletion of the gene has been found in some hemophilia B patients. PCR analysis of its expression in mouse tissues shows a restriction to the gonads and tissues of neuroectodermal origin. It also identifies an exon encoding 42 amino acids that is alternatively spliced in murine, but not human testis.
May 1991: Oncogene
https://read.qxmd.com/read/1611909/localization-of-the-5-end-of-the-mcf2-oncogene-to-human-chromosome-15q15-q23
#29
JOURNAL ARTICLE
F Galland, M Stefanova, M Lafage, D Birnbaum
Oncogenic activation of the MCF.2 cell line-derived transforming sequence gene (MCF2) occurs through substitution of part of its 5' coding region by unrelated nonsyntenic sequences. Analysis of the MCF2 oncogene locus revealed complex recombination events involving four discontinuous human DNA segments. The upstream replacing sequence, named URS, represents the farthest 5' portion of the locus. The URS sequence maps to the D15S93 locus on human chromosome 15q15----q23.
1992: Cytogenetics and Cell Genetics
https://read.qxmd.com/read/1424984/gene-mapping-studies-confirm-the-homology-between-the-platypus-x-and-echidna-x1-chromosomes-and-identify-a-conserved-ancestral-monotreme-x-chromosome
#30
COMPARATIVE STUDY
J M Watson, A Riggs, J A Graves
The identification of the sex chromosomes in the three extant species of Prototherian mammals (the monotremes) is complicated by their involvement in a multivalent translocation chain at the first division of male meiosis. The platypus X chromosome, identified by the presence of two copies in females and one in males, has been found to possess a suite of genes that have been mapped to the X chromosomes of all eutherian and metatherian mammals. We have extended gene mapping studies to a member of the only other extant monotreme family, the echidna, which has a G-band equivalent X1 chromosome, as well as a smaller X2...
October 1992: Chromosoma
https://read.qxmd.com/read/359037/fluorine-19-nuclear-magnetic-resonance-studies-of-lipid-phase-transitions-in-model-and-biological-membranes
#31
JOURNAL ARTICLE
M P Gent, C Ho
Fluorinated fatty acids of the general formula CH3(CH2)13-mCF2(CH2)m-2COOH are informative spectroscopic probes of the gel to liquid-crystalline phase transitions in phospholipid dispersions and in biological membranes. We present theoretical considerations to suggest that the 19F nuclear magnetic resonance line shapes are very different for frozen and fluid lipid regions. Our studies confirm this expectation for mixed phospholipid multilamellar dispersions containing a trace of difluoromyristate. The method correctly measures the onset and completion temperatures of the transition in the well-studied dimyristoylphosphaditylcholine distearoylphosphatidylcholine system and also describes the motional behavior of the solid and fluid phases within the transition...
July 25, 1978: Biochemistry
https://read.qxmd.com/read/345274/fluorine-19-nuclear-magnetic-resonance-studies-of-escherichia-coli-membranes
#32
JOURNAL ARTICLE
M P Gent, P F Cottam, C Ho
Several fluorinated fatty acids of the general structure CH3(CH2)13--mCF2(CH2)m--2COOH are incorporated biosynthetically as unsaturated fatty acid analogues into the phospholipids of Escherichia coli. Under optimum conditions an unsaturated fatty acid autotroph, K1060B5, can be grown so that 50% of the total phospholipid fatty acids are 8,8-difluoromyristate. Conditions are found for which more than 20% of the fatty acids are fluorinated before a decrease in growth rate is observed. We have used 19F nuclear magnetic resonance to examine membranes isolated from E...
February 1978: Proceedings of the National Academy of Sciences of the United States of America
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