keyword
https://read.qxmd.com/read/38727891/mirnas-in-treatment-resistant-depression-a-systematic-review
#1
REVIEW
Lun Cai, Jingwen Xu, Jie Liu, Huazheng Luo, Rongrong Yang, Xiongbin Gui, Liping Wei
BACKGROUND: Treatment-resistant depression (TRD) is a condition in a subset of depressed patients characterized by resistance to antidepressant medications. The global prevalence of TRD has been steadily increasing, yet significant advancements in its diagnosis and treatment remain elusive despite extensive research efforts. The precise underlying pathogenic mechanisms are still not fully understood. Epigenetic mechanisms play a vital role in a wide range of diseases. In recent years, investigators have increasingly focused on the regulatory roles of miRNAs in the onset and progression of TRD...
May 10, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38622049/ccl2-regulated-by-the-ctbp1-as2-mir-335-5p-axis-promotes-hemangioma-progression-and-angiogenesis
#2
JOURNAL ARTICLE
Ruixuan Li, Ying Liu, Jianfeng Liu, Bo Chen, Zhongjie Ji, Aixia Xu, Tianhua Zhang
Context: Hemangioma (HA) is a benign vascular neoplasm that can lead to permanent scarring. C-C motif chemokine ligand 2 (CCL2) plays a crucial role in facilitating growth and angiogenesis during HA progression. However, the mechanism regulating CCL2 in HA remains poorly elucidated. Objective: To elucidate the mechanism regulating CCL2 in HA. Methods: Quantitative real-time polymerase chain reaction (RT-qPCR) was employed to determine the expression levels of CCL2, long noncoding RNA (lncRNA) CTBP1 divergent transcript (CTBP1-AS2), and microRNAs (miRNAs)...
April 15, 2024: Immunopharmacology and Immunotoxicology
https://read.qxmd.com/read/38590544/identification-of-chemoresistance-associated-key-genes-mirnas-tfs-in-docetaxel-resistant-breast-cancer-by-bioinformatics-analysis
#3
JOURNAL ARTICLE
Baddipadige Raju, Gera Narendra, Himanshu Verma, Om Silakari
UNLABELLED: The present study aimed to identify the differentially expressed genes (DEGs) and enriched pathways in docetaxel (DTX) resistant breast cancer cell lines by bioinformatics analysis. The microarray dataset GSE28784 was obtained from gene expression omnibus (GEO) database. The differentially expressed genes (DEGs), gene ontology (GO), and Kyoto Encyclopedia of gene and genome (KEGG) pathway analyses were performed with the help of GEO2R and DAVID tools. Furthermore, the protein-protein interaction (PPI) and hub-gene network of DEGs were constructed using STRING and Cytohubba tools...
May 2024: 3 Biotech
https://read.qxmd.com/read/38581435/microrna-expression-profiling-in-tears-and-blood-as-predictive-biomarkers-for-anti-vegf-treatment-response-in-wet-age-related-macular-degeneration
#4
JOURNAL ARTICLE
Chu-Yu Yen, Chi-Ming Chiu, I-Mo Fang
PURPOSE: This study aimed to investigate the potential of microRNAs (miRNAs) in tears, blood, and aqueous humor as biomarkers for predicting treatment response in wet age-related macular degeneration (AMD) patients undergoing anti-vascular endothelial growth factor (anti-VEGF) therapy. METHODS: In a single-center prospective cohort study, treatment-naïve wet AMD patients and age-matched controls were enrolled. Clinical data and miRNA levels (miR-199a-3p, miR-365-3p, miR-200b-3p, miR-195-5p, miR-335-5p, and miR-185-5p) in tears, blood, and aqueous humor were collected...
April 6, 2024: Graefe's Archive for Clinical and Experimental Ophthalmology
https://read.qxmd.com/read/38549107/comparative-analysis-of-gene-expression-between-mice-and-humans-in-acetaminophen-induced-liver-injury-by-integrating-bioinformatics-analysis
#5
JOURNAL ARTICLE
Shanmin Zhao, Yan Feng, Jingyuan Zhang, Qianqian Zhang, Junyang Wang, Shufang Cui
OBJECTIVE: Mice are routinely utilized as animal models of drug-induced liver injury (DILI), however, there are significant differences in the pathogenesis between mice and humans. This study aimed to compare gene expression between humans and mice in acetaminophen (APAP)-induced liver injury (AILI), and investigate the similarities and differences in biological processes between the two species. METHODS: A pair of public datasets (GSE218879 and GSE120652) obtained from GEO were analyzed using "Limma" package in R language, and differentially expressed genes (DEGs) were identified, including co-expressed DEGs (co-DEGs) and specific-expressed DEGS (specific-DEGs)...
March 28, 2024: BMC Medical Genomics
https://read.qxmd.com/read/38522707/exposure-to-micron-grade-silica-particles-triggers-pulmonary-fibrosis-through-cell-to-cell-delivery-of-exosomal-mir-107
#6
JOURNAL ARTICLE
Jiarui Xia, Di Wang, Wei Guo, Yangqing Pei, Lin Zhang, Lei Bao, Yiping Li, Yaqian Qu, Youliang Zhao, Changfu Hao, Wu Yao
Long-term exposure to inhalable silica particles may lead to severe systemic pulmonary disease, such as silicosis. Exosomes have been demonstrated to dominate the pathogenesis of silicosis, but the underlying mechanisms remain unclear. Therefore, this study aimed to explore the roles of exosomes by transmitting miR-107, which has been linked to the toxic pulmonary effects of silica particles. We found that miR-107, miR-122-5p, miR-125a-5p, miR-126-5p, and miR-335-5p were elevated in exosomes extracted from the serum of patients with silicosis...
March 22, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38447950/dysregulation-of-mir-335-5p-in-people-with-obesity-and-its-predictive-value-for-metabolic-syndrome
#7
JOURNAL ARTICLE
Lu Liting, He Yufeng
The epidemic of obesity and metabolic syndrome has become the most serious global public health problem. The part played by microRNA (miRNA) in the onset and progression of obesity and metabolic syndrome has been increasingly focused upon. The goal of this study was to explore miR-335-5p as a potential predictive biomarker or therapeutic target for obesity and metabolic syndrome. The expression level of miR-335-5p was detected by qRT-PCR. The diagnostic value of miR-335-5p was evaluated by ROC curve. The association between serum miR-335-5p levels and various clinical parameters was assessed using the chi-square test...
March 6, 2024: Hormone and Metabolic Research
https://read.qxmd.com/read/38416272/identification-and-validation-of-lipid-metabolism-gene-fasn-associated-mirna-in-wilms-tumor
#8
JOURNAL ARTICLE
Xiaoqing Wang, Xiao Li, Lin Tan, Fengjun Zhang, Jing Zhang, Xu Zhao, Yongfei Zhang, Guoqiang Du, Wei Liu
miRNA has been a research hotspot in recent years and its scope of action is very wide, involving the regulation of cell proliferation, differentiation, apoptosis, and other biological behaviors. This study intends to explore the role of miRNA in the lipid metabolism and development of Wilms tumor (WT) by detecting and analyzing the differences in the expression profiles of miRNAs between the tumor and adjacent normal tissue. Gene detection was performed in tumor tissues and adjacent normal tissues of three cases of WT to screen differentially expressed miRNAs (DEMs)...
February 28, 2024: Biochemical Genetics
https://read.qxmd.com/read/38311997/-plasma-mirna-expression-in-patients-with-genetically-confirmed-multiple-endocrine-neoplasia-type-1-syndrome-and-its-phenocopies
#9
JOURNAL ARTICLE
D A Trukhina, E O Mamedova, A G Nikitin, P A Koshkin, Zh E Belaya, G A Melnichenko
BACKGROUND: MEN-1 is a rare autosomal dominant disease caused by mutations in MEN1 gene encoding the menin protein. This syndrome is characterized by the occurrence of parathyroid tumors, gastroenteropancreatic neuroendocrine tumors, pituitary adenomas, as well as other endocrine and non-endocrine tumors. If a patient with the MEN-1 phenotype carry no mutations in the MEN1 gene, the condition considers a phenocopy of syndrome (phMEN1). The possible cause of this changes could be changes in epigenetic regulation, particularly in microRNA expression that might affect menin signaling pathways...
January 24, 2024: Problemy E̊ndokrinologii
https://read.qxmd.com/read/38310394/human-umbilical-cord-mesenchymal-stem-cell-exosome-derived-mir-335-5p-alleviated-lipopolysaccharide-induced-acute-lung-injury-by-regulating-the-m6a-level-of-itg%C3%AE-4-gene
#10
JOURNAL ARTICLE
Linrui Li, Xi Zhang, Yanping Chen
BACKGROUND: Acute lung injury (ALI) is a serious complication that may accompany severe pneumonia in children. Derived from exosomes of human umbilical cord mesenchymal stem cell exosome (HucMSC-Exo) can contribute to the regeneration of damaged lung tissue. This study aims to investigate the impact of HucMSC-Exo on ALI and its potential mechanisms. METHODS: Firstly, RT-qPCR was performed to assess the expression of miR-335-5p. Subsequently, Pearson correlation analysis was performed to examine the correlation between METTL14 and miR-335-5p, as well as the correlation between METTL14 and ITGB4...
January 17, 2024: Current Medicinal Chemistry
https://read.qxmd.com/read/38254314/circ_0011058-alleviates-ra-pathology-through-the-circ_0011058-mir-335-5p-cul4b-signal-axis
#11
JOURNAL ARTICLE
Xiaomei Wang, Qiuyun Xue, Qiangjun Duan, Ziyi Sun, Yajie Wu, Shuo Yang, Pengfei Xu, Huibo Cao, Faxue Liao, Xiao Wang, Chenggui Miao
Our previous study found that Cullin 4B (CUL4B) inhibited rheumatoid arthritis (RA) pathology through glycogen synthase kinase-3beta (GSK3β)/canonical Wnt signalling pathway. In this work, pre-experiment and bioinformatics analysis suggested that circ_0011058 may lead to the up-regulation of CUL4B expression by inhibiting miR-335-5p. Therefore, we studied whether circ_0011058 can promote the expression of CUL4B through sponging the miR-335-5p and further promote the pathological development of RA. Bioinformatics prediction, real-time quantitative PCR (RT-qPCR), western blot (WB), double luciferase reporter gene and other relevant methods were used to study the inhibition of circ_0011058 on RA pathology and its molecular mechanism...
December 2024: Autoimmunity
https://read.qxmd.com/read/38084671/curcumin-modulates-cell-type-specific-mirna-networks-to-induce-cytotoxicity-in-ovarian-cancer-cells
#12
JOURNAL ARTICLE
Febina Ravindran, Anisha Mhatre, Jinsha Koroth, Suchitra Narayan, Bibha Choudhary
AIM: To understand the epigenetic role of curcumin, a natural polyphenolic compound extracted from the spice Curcuma longa in inducing cytotoxicity in two molecularly distinct ovarian cancer cell lines: PA1 and A2780. MATERIALS AND METHODS: An integrated mRNA-miRNA sequence analysis was performed to determine the curcumin-induced mRNA-miRNA regulatory networks in the induction of cytotoxicity. The miRNA-mRNA pathways, the miRNAs and their targets implicated in apoptosis, autophagy, DNA damage, and stemness markers were validated...
December 1, 2023: Life Sciences
https://read.qxmd.com/read/38063112/comprehensive-bioinformatics-analysis-of-key-mirnas-and-signaling-pathways-in-the-body-fluids-of-human-knee-osteoarthritis
#13
JOURNAL ARTICLE
Mahshid Malakootian, Akram Gholipour, Maziar Oveisee
Osteoarthritis (OA) is one of the principal causes of chronic joint disease with a series of pathological features. The present study aimed to identify key microRNAs (miRNAs) and signaling pathways in OA biological fluids to explain the potential mechanisms underlying the disease and introduce OA biomarkers using computational analysis. Differentially expressed microRNAs (DEmiRNAs) in the serum, plasma, and synovial fluids of OA patients were identified using the GEO2R, limma, and DESeq2 packages in the R software based on the dataset from GSE151341, GSE105027, and GSE126677...
November 30, 2023: Cellular and Molecular Biology
https://read.qxmd.com/read/38010085/circ-marc2-silencing-protects-human-cardiomyocytes-from-hypoxia-reoxygenation-h-r-induced-injury-by-modulating-mir-335-5p-trpm7-axis
#14
JOURNAL ARTICLE
Huazhao Deng, Meihong Cui, Ling Liu, Fei Yang
Myocardial ischemia-reperfusion injury (MIRI) is a vital risk factor for cardiovascular diseases. Some circular RNAs (circRNAs) have been identified as modulators of MIRI. But, the effects of circ-mitochondrial amidoxime reducing component 2 (circ-MARC2) in MIRI are unclear. Our results showed that circ-MARC2 was overexpressed in hypoxia/reoxygenation (H/R)-treated AC16 cells. Circ-MARC2 silencing reversed the inhibitory effect of H/R treatment on cell proliferation and promoting effects on lactate dehydrogenase (LDH) activity, creatine kinase (CK-MB) activity and cell apoptosis in AC16 cells...
November 16, 2023: Shock
https://read.qxmd.com/read/37936447/crucial-role-of-micrornas-as-new-targets-for-amelogenesis-disorders-detection
#15
JOURNAL ARTICLE
Nadezhda Masunova, Maria Tereschenko, Georgy Alexandrov, Liudmila Spirina, Natalia Tarasenko
INTRODUCTION: Amelogenesis imperfecta (AI) refers to a heterogeneous group of conditions with multiple factors which contribute to the hypomineralisation of enamel. Preventive measures are necessary to predict this pathology. Prospects for preventive medicine are closely related to the search for new informative methods for diagnosing a human disease. MicroRNAs are prominent for the non-invasive diagnostic platform. THE AIM OF THE STUDY: The aim of the review is to review the heterogeneous factors involved in amelogenesis and to select the microRNA panel associated with the AI type...
November 5, 2023: Current Drug Targets
https://read.qxmd.com/read/37925496/identification-of-genetic-biomarkers-drug-targets-and-agents-for-respiratory-diseases-utilising-integrated-bioinformatics-approaches
#16
JOURNAL ARTICLE
Fee Faysal Ahmed, Arnob Dip Das, Mst Joynab Sumi, Md Zohurul Islam, Md Shahedur Rahman, Md Harun Rashid, Salem A Alyami, Naif Alotaibi, A K M Azad, Mohammad Ali Moni
Respiratory diseases (RD) are significant public health burdens and malignant diseases worldwide. However, the RD-related biological information and interconnection still need to be better understood. Thus, this study aims to detect common differential genes and potential hub genes (HubGs), emphasizing their actions, signaling pathways, regulatory biomarkers for diagnosing RD and candidate drugs for treating RD. In this paper we used integrated bioinformatics approaches (such as, gene ontology (GO) and KEGG pathway enrichment analysis, molecular docking, molecular dynamic simulation and network-based molecular interaction analysis)...
November 4, 2023: Scientific Reports
https://read.qxmd.com/read/37843824/shear-stress-and-micrornas-for-better-metastatic-cancer-management
#17
JOURNAL ARTICLE
Siluveru KrishnaPriya, Pallavi S Nair, Prerna Bhalla, D Karunagaran, G K Suraishkumar
Metastasis is the process by which cancer cells move from the primary location to establish themselves in a new location in the human body. It is still a significant challenge in cancer management because it is responsible for 90% of cancer-related deaths. In this work, we present an idea to use shear stress encountered by all metastasizing cells as an elegant means to deactivate metastasizing cancer cells. Shear-induced ROS and cross-talk between ROS and miRNA play crucial roles in deactivating metastasizing cancer cells...
October 16, 2023: Biotechnology Progress
https://read.qxmd.com/read/37790603/serum-polychlorinated-biphenyl-levels-and-circulating-mirnas-in-non-obese-women-with-and-without-polycystic-ovary-syndrome
#18
JOURNAL ARTICLE
Edwina Brennan, Alexandra E Butler, Daniel S Drage, Thozhukat Sathyapalan, Stephen L Atkin
INTRODUCTION: Polychlorinated biphenyls (PCBs), organic lipophilic pollutants that accumulate through diet and increase with age, have been associated with polycystic ovary syndrome (PCOS) and shown to affect microRNA (miRNA) expression. This work aimed to determine if PCBs were associated with circulating miRNAs and whether there were any correlations with serum PCB/miRNA levels and hormonal changes. METHODS: 29 non-obese PCOS and 29 healthy control women, with similar age and body mass index (BMI), had their serum miRNAs measured together with 7 indicator PCBs (PCB28, PCB52, PCB101, PCB118, PCB138, PCB153, PCB180) using high resolution gas chromatography coupled with high resolution mass spectrometry...
2023: Frontiers in Endocrinology
https://read.qxmd.com/read/37727896/mir-335-5p-inhibits-endochondral-ossification-by-directly-targeting-sp1-in-tmj-oa
#19
JOURNAL ARTICLE
Simo Xia, Jiong Zhao, Dahe Zhang, Lu Chen, Yuxin Zhang, Pei Shen, Chi Yang
OBJECTIVE: During the development of temporomandibular joint osteoarthritis, endochondral ossification is compromised which leads to condylar degeneration; miR-335-5p in endochondral ossification in osteoarthritic condylar cartilage tissue remains unclear. METHODS: Up-regulated microRNA and its target gene were searched for endochondral ossification in osteoarthritis articular cartilage. The effect of increased or decreased miR-335-5p on endochondral ossification was evaluated by transfecting miR-335-5p mimics or miR-335-5p inhibitor in vitro in chondrocytes C28/I2...
September 20, 2023: Oral Diseases
https://read.qxmd.com/read/37721532/circulating-micrornas-as-biomarker-for-vessel-associated-retinal-diseases
#20
JOURNAL ARTICLE
Merlin Dähmcke, Martin Busch, Johanna M Pfeil, Tara Brauckmann, Daniel Schulz, Wael Omran, Ewa Morawiec-Kisiel, Fabienne Wähler, Sebastian Paul, Allam Tayar, Marie-Christine Bründer, Bastian Grundel, Andreas Stahl
INTRODUCTION: Vessel-associated retinal diseases are a major cause of blindness and severe visual impairment. The identification of appropriate biomarkers is of great importance to better anticipate disease progression and establish more targeted treatment options. MicroRNAs (miRNAs) are short, single-stranded, non-coding ribonucleic acids that are involved in the post-transcriptional regulation of gene expression through hybridization with messenger RNA. The expression of certain miRNAs can be different in patients with pathological processes and can be used for the detection and differentiation of various diseases...
August 9, 2023: Ophthalmologica. Journal International D'ophtalmologie
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