keyword
https://read.qxmd.com/read/38654471/identification-of-eukaryotic-translation-initiation-factor-4b-as-a-novel-candidate-gene-for-congenital-hypothyroidism
#1
JOURNAL ARTICLE
Feng Sun, Rui-Jia Zhang, Ya Fang, Cheng-Yan Yan, Chang-Run Zhang, Feng-Yao Wu, Rui-Meng Yang, Bing Han, Huai-Dong Song, Shuang-Xia Zhao
CONTEXT: Congenital hypothyroidism (CH) is the most common endocrine disorder in neonates, but its etiology is still poorly understood. OBJECTIVE: We performed whole exome sequencing to identify novel causative gene for CH and functional studies to validate its role in the occurrence of CH. METHODS: Whole exome sequencing in 98 CH patients not harboring known CH candidate genes and bioinformatic analysis were performed. Functional analysis was performed using morpholino, a synthetic short antisense oligonucleotide that contains 25 DNA bases on a methylene morpholine backbone, in zebrafish and CRISPR‒Cas9-mediated gene knockout in mice...
April 24, 2024: Journal of Clinical Endocrinology and Metabolism
https://read.qxmd.com/read/38650121/tanshinone%C3%A2-iia-suppresses-ferroptosis-to-attenuate-renal-podocyte-injury-in-diabetic-nephropathy-through-the-embryonic-lethal-abnormal-visual-like-protein%C3%A2-1-and-acyl-coenzyme%C3%A2-a-synthetase-long-chain-family-member%C3%A2-4-signaling-pathway
#2
JOURNAL ARTICLE
Shuai Zhu, Zhiqiang Kang, Fengjiao Zhang
AIMS/INTRODUCTION: Tanshinone IIA (TIIA) is one of the main components of the root of the red-rooted Salvia miltiorrhiza Bunge. However, the molecular mechanisms underlying TIIA-mediated protective effects in diabetic nephropathy (DN) are still unclear. MATERIALS AND METHODS: High glucose (HG)-induced mouse podocyte cell line (MPC5) cells were used as the in vitro model of DN and treated with TIIA. Cell viability, proliferation and apoptosis were detected using 3-(4, 5-dimethylthiazolyl-2)-2, 5-diphenyltetrazolium bromide, 5-ethynyl-2'-deoxyuridine and flow cytometry assays...
April 22, 2024: Journal of Diabetes Investigation
https://read.qxmd.com/read/38645057/the-microtubule-regulator-efa-6-forms-spatially-restricted-cortical-foci-dependent-on-its-intrinsically-disordered-region-and-interactions-with-tubulins
#3
Anjali Sandhu, Xiaohui Lyu, Xinghaoyun Wan, Xuefeng Meng, Ngang Heok Tang, Gilberto Gonzalez, Ishana N Syed, Lizhen Chen, Yishi Jin, Andrew D Chisholm
UNLABELLED: Microtubules (MTs) are dynamic components of the cytoskeleton and play essential roles in morphogenesis and maintenance of tissue and cell integrity. Despite recent advances in understanding MT ultrastructure, organization, and growth control, how cells regulate MT organization at the cell cortex remains poorly understood. The EFA-6/EFA6 proteins are recently identified membrane-associated proteins that inhibit cortical MT dynamics. Here, combining visualization of endogenously tagged C...
April 14, 2024: bioRxiv
https://read.qxmd.com/read/38640735/stasimon-tmem41b-is-required-for-cell-proliferation-and-adult-mouse-survival
#4
JOURNAL ARTICLE
Maria J Carlini, Meaghan Van Alstyne, Hua Yang, Shubhi Yadav, Neil A Shneider, Livio Pellizzoni
Stasimon/Tmem41b is a transmembrane protein with phospholipid scrambling activity that resides in the endoplasmic reticulum and has been implicated in autophagy, lipid metabolism, and viral replication. Stasimon/Tmem41b has also been linked to the function of sensory-motor circuits and the pathogenesis of spinal muscular atrophy. However, the early embryonic lethality of constitutive knockout in mice has hindered the analysis of spatial and temporal requirements of Stasimon/Tmem41b in vivo. To address this, we developed a novel mouse line harboring a conditional knockout allele of the Stasimon/Tmem41b gene in which exon 4 has been flanked by loxP sites (Stas/Tmem41bCKO )...
April 16, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38631163/trpm7-in-neurodevelopment-and-therapeutic-prospects-for-neurodegenerative-disease
#5
REVIEW
Zhengwei Luo, Xinyang Zhang, Andrea Fleig, Daniel Romo, Kenneth G Hull, F David Horgen, Hong-Shuo Sun, Zhong-Ping Feng
Neurodevelopment, a complex and highly regulated process, plays a foundational role in shaping the structure and function of the nervous system. The transient receptor potential melastatin 7 (TRPM7), a divalent cation channel with an α-kinase domain, mediates a wide range of cellular functions, including proliferation, migration, cell adhesion, and survival, all of which are essential processes in neurodevelopment. The global knockout of either TRPM7 or TRPM7-kinase is embryonically lethal, highlighting the crucial role of TRPM7 in development in vivo...
April 6, 2024: Cell Calcium
https://read.qxmd.com/read/38621447/dtymk-is-an-essential-gene-in-mice-and-heterozygosity-does-not-cause-neural-tube-defects
#6
JOURNAL ARTICLE
Kendra A Tiani, Patrick J Stover
Regulation of nucleotide biosynthesis is necessary for maintaining cellular processes including DNA replication and repair. A key enzyme in this process is deoxythymidylate kinase (dTYMK), which catalyzes the initial step in the production of dTTP from dTMP. This gene constitutes the first merged step of dTTP synthesis from the de novo and salvage pathways which regulate dTMP biosynthesis. Decreased de novo dTMP biosynthesis causes dysregulated dTTP:dUTP pools, and leads to increased uracil in DNA and neural tube closure defect (NTD) development in mice...
April 15, 2024: Archives of Biochemistry and Biophysics
https://read.qxmd.com/read/38618720/buffering-mechanism-in-aortic-arch-artery-formation-and-congenital-heart-disease
#7
JOURNAL ARTICLE
AnnJosette Ramirez, Christina A Vyzas, Huaning Zhao, Kevin Eng, Karl Degenhardt, Sophie Astrof
BACKGROUND: The resiliency of embryonic development to genetic and environmental perturbations has been long appreciated; however, little is known about the mechanisms underlying the robustness of developmental processes. Aberrations resulting in neonatal lethality are exemplified by congenital heart disease arising from defective morphogenesis of pharyngeal arch arteries (PAAs) and their derivatives. OBJECTIVE: To uncover mechanisms underlying the robustness of PAA morphogenesis...
April 15, 2024: Circulation Research
https://read.qxmd.com/read/38616731/missense-mutation-c667f-in-murine-%C3%AE-dystroglycan-causes-embryonic-lethality-myopathy-and-blood-brain-barrier-destabilization
#8
JOURNAL ARTICLE
Rui Lois Tan, Francesca Sciandra, Wolfgang Hübner, Manuela Bozzi, Jens Reimann, Susanne Schoch, Andrea Brancaccio, Sandra Blaess
Dystroglycan (DG) is an extracellular matrix receptor consisting of an α- and a β-DG subunit encoded by the DAG1 gene. The homozygous mutation (c.2006G>T, p.Cys669Phe) in β-DG causes Muscle-Eye-Brain disease with multicystic leukodystrophy in humans. In a mouse model of this primary dystroglycanopathy, approximately two-thirds of homozygous embryos fail to develop to term. Mutant mice that are born undergo a normal postnatal development but show a late-onset myopathy with partially penetrant histopathological changes and an impaired performance on an activity wheel...
April 15, 2024: Disease Models & Mechanisms
https://read.qxmd.com/read/38612913/high-nacl-concentrations-in-water-are-associated-with-developmental-abnormalities-and-altered-gene-expression-in-zebrafish
#9
JOURNAL ARTICLE
Denis A Seli, Andrew Prendergast, Yagmur Ergun, Antariksh Tyagi, Hugh S Taylor
Salt is frequently introduced in ecosystems, where it acts as a pollutant. This study examined how changes in salinity affect the survival and development of zebrafish from the two-cell to the blastocyst stage and from the blastocyst to the larval stage. Control zebrafish embryos were cultured in E3 medium containing 5 mM Sodium Chloride (NaCl), 0.17 mM Potassium Chloride (KCL), 0.33 mM Calcium Chloride (CaCl2 ), and 0.33 mM Magnesium Sulfade (MgSO4 ). Experiments were conducted using increasing concentrations of each individual salt at 5×, 10×, 50×, and 100× the concentration found in E3 medium...
April 7, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38605287/a-murine-model-for-the-del-gjb6-d13s1830-deletion-recapitulating-the-phenotype-of-human-dfnb1-hearing-impairment-generation-and-functional-and-histopathological-study
#10
JOURNAL ARTICLE
María Domínguez-Ruiz, Silvia Murillo-Cuesta, Julio Contreras, Marta Cantero, Gema Garrido, Belén Martín-Bernardo, Elena Gómez-Rosas, Almudena Fernández, Francisco J Del Castillo, Lluís Montoliu, Isabel Varela-Nieto, Ignacio Del Castillo
Inherited hearing impairment is a remarkably heterogeneous monogenic condition, involving hundreds of genes, most of them with very small (< 1%) epidemiological contributions. The exception is GJB2, the gene encoding connexin-26 and underlying DFNB1, which is the most frequent type of autosomal recessive non-syndromic hearing impairment (ARNSHI) in most populations (up to 40% of ARNSHI cases). DFNB1 is caused by different types of pathogenic variants in GJB2, but also by large deletions that keep the gene intact but remove an upstream regulatory element that is essential for its expression...
April 11, 2024: BMC Genomics
https://read.qxmd.com/read/38605226/a-mettl16-m-6-a-mybl2b-igf2bp1-axis-ensures-cell-cycle-progression-of-embryonic-hematopoietic-stem-and-progenitor-cells
#11
JOURNAL ARTICLE
Yunqiao Han, Kui Sun, Shanshan Yu, Yayun Qin, Zuxiao Zhang, Jiong Luo, Hualei Hu, Liyan Dai, Manman Cui, Chaolin Jiang, Fei Liu, Yuwen Huang, Pan Gao, Xiang Chen, Tianqing Xin, Xiang Ren, Xiaoyan Wu, Jieping Song, Qing Wang, Zhaohui Tang, Jianjun Chen, Haojian Zhang, Xianqin Zhang, Mugen Liu, Daji Luo
Prenatal lethality associated with mouse knockout of Mettl16, a recently identified RNA N6-methyladenosine (m6 A) methyltransferase, has hampered characterization of the essential role of METTL16-mediated RNA m6 A modification in early embryonic development. Here, using cross-species single-cell RNA sequencing analysis, we found that during early embryonic development, METTL16 is more highly expressed in vertebrate hematopoietic stem and progenitor cells (HSPCs) than other methyltransferases. In Mettl16-deficient zebrafish, proliferation capacity of embryonic HSPCs is compromised due to G1/S cell cycle arrest, an effect whose rescue requires Mettl16 with intact methyltransferase activity...
April 11, 2024: EMBO Journal
https://read.qxmd.com/read/38601074/functional-analysis-of-rras2-pathogenic-variants-with-a-noonan-like-phenotype
#12
JOURNAL ARTICLE
Takaya Iida, Arisa Igarashi, Kae Fukunaga, Taiga Aoki, Tomomi Hidai, Kumiko Yanagi, Masahiko Yamamori, Kazuhito Satou, Hayato Go, Tomoki Kosho, Ryuto Maki, Takashi Suzuki, Yohei Nitta, Atsushi Sugie, Yoichi Asaoka, Makoto Furutani-Seiki, Tetsuaki Kimura, Yoichi Matsubara, Tadashi Kaname
Introduction: RRAS2, a member of the R-Ras subfamily of Ras-like low-molecular-weight GTPases, is considered to regulate cell proliferation and differentiation via the RAS/MAPK signaling pathway. Seven RRAS2 pathogenic variants have been reported in patients with Noonan syndrome; however, few functional analyses have been conducted. Herein, we report two patients who presented with a Noonan-like phenotype with recurrent and novel RRAS2 pathogenic variants (p.Gly23Val and p.Gly24Glu, respectively) and the results of their functional analysis...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38593904/tata-binding-associated-factors-have-distinct-roles-during-early-mammalian-development
#13
JOURNAL ARTICLE
Xinjian Doris He, Shelby Phillips, Kaito Hioki, Prabin Dhangada Majhi, Courtney Babbitt, Kimberly D Tremblay, Leonid A Pobezinsky, Jesse Mager
Early embryonic development is a finely orchestrated process that requires precise regulation of gene expression coordinated with morphogenetic events. TATA-box binding protein-associated factors (TAFs), integral components of transcription initiation coactivators like TFIID and SAGA, play a crucial role in this intricate process. Here we show that disruptions in TAF5, TAF12 and TAF13 individually lead to embryonic lethality in the mouse, resulting in overlapping yet distinct phenotypes. Taf5 and Taf12 mutant embryos exhibited a failure to implant post-blastocyst formation, and Taf5 mutants have aberrant lineage specification within the inner cell mass...
April 7, 2024: Developmental Biology
https://read.qxmd.com/read/38593744/atorvastatin-causes-developmental-and-behavioral-toxicity-in-yellowstripe-goby-mugilogobius-chulae-embryos-larvae-via-disrupting-lipid-metabolism-and-autophagy-processes
#14
JOURNAL ARTICLE
Yufei Zhao, Yimeng Wang, Jinzhi Ren, Weibo Gong, Xiangping Nie, Ying Peng, Jianjun Li, Chunni Duan
Atorvastatin (ATV) is one of the most commonly prescribed lipid-lowering drugs detected frequently in the environment due to its high use and low degradation rate. However, the toxic effects of residual ATV in the aquatic environment on non-target organisms and its toxic mechanisms are still largely unknown. In the present study, embryos of a native estuarine benthic fish, Mugilogobius chulae, were employed to investigate the developmental and behavioral toxic effects of ATV including environmentally relevant concentrations...
April 6, 2024: Aquatic Toxicology
https://read.qxmd.com/read/38590343/assessing-developmental-and-transcriptional-effects-of-pm2-5-on-zebrafish-embryos
#15
JOURNAL ARTICLE
Pinnakarn Techapichetvanich, Siwapech Sillapaprayoon, Pornpun Vivithanaporn, Wittaya Pimtong, Phisit Khemawoot
Investigating fine particulate matter (PM2.5) toxicity is crucial for health risk assessment and pollution control. This study explores the developmental toxicity of two PM2.5 sources: standard reference material 2786 (NIST, USA) and PM2.5 from Chakri Naruebodindra Medical Institute (CNMI, Thailand) located in the Bangkok Metropolitan area. Zebrafish embryos exposed to these samples exhibited embryonic mortality, with 50% lethal concentration (LC50 ) values of 1476 µg/mL for standard PM2.5 and 512 µg/mL for CNMI PM2...
June 2024: Toxicology Reports
https://read.qxmd.com/read/38588611/cardiac-specific-deletion-of-heat-shock-protein-60-induces-mitochondrial-stress-and-disrupts-heart-development-in-mice
#16
JOURNAL ARTICLE
Tao Shen, Shuting Wang, Can Huang, Siting Zhu, Xiangbin Zhu, Na Li, Hong Wang, Lei Huang, Mingming Ren, Zhen Han, Jianjun Ge, Ze'e Chen, Kunfu Ouyang
Congenital heart diseases are the most common birth defects around the world. Emerging evidence suggests that mitochondrial homeostasis is required for normal heart development. In mitochondria, a series of molecular chaperones including heat shock protein 60 (HSP60) are engaged in assisting the import and folding of mitochondrial proteins. However, it remains largely obscure whether and how these mitochondrial chaperones regulate cardiac development. Here, we generated a cardiac-specific Hspd1 deletion mouse model by αMHC-Cre and investigated the role of HSP60 in cardiac development...
April 4, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38582453/selenoprotein-i-is-indispensable-for-ether-lipid-homeostasis-and-proper-myelination
#17
JOURNAL ARTICLE
Lance G A Nunes, Chi Ma, FuKun W Hoffmann, Ashley E Shay, Matthew W Pitts, Peter R Hoffmann
Selenoprotein I (SELENOI) catalyzes the final reaction of the CDP-ethanolamine branch of the Kennedy pathway, generating the phospholipids phosphatidylethanolamine (PE) and plasmenyl-PE. Plasmenyl-PE is a key component of myelin and is characterized by a vinyl ether bond that preferentially reacts with oxidants, thus serves as a sacrificial antioxidant. In humans, multiple loss-of-function mutations in genes affecting plasmenyl-PE metabolism have been implicated in hereditary spastic paraplegia (HSP), including SELENOI...
April 4, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38581089/apoptotic-vesicles-are-required-to-repair-dna-damage-and-suppress-premature-cellular-senescence
#18
JOURNAL ARTICLE
Zhiqing Huang, Yuzhi Zhuang, Wenwen Li, Mingchen Ma, Fangcao Lei, Yan Qu, Jiaqi Li, Huigen Luo, Changzheng Li, Lu Lu, Lan Ma, Xiao Zhang, Xiaoxing Kou, Linjia Jiang, Xueli Mao, Songtao Shi
It is well known that DNA damage can cause apoptosis. However, whether apoptosis and its metabolites contribute to DNA repair is largely unknown. In this study, we found that apoptosis-deficient Fasmut and Bim- /- mice show significantly elevated DNA damage and premature cellular senescence, along with a significantly reduced number of 16,000 g apoptotic vesicles (apoVs). Intravenous infusion of mesenchymal stromal cell (MSC)-derived 16,000 g apoVs rescued the DNA damage and premature senescence in Fasmut and Bim-/- mice...
April 2024: Journal of Extracellular Vesicles
https://read.qxmd.com/read/38564939/dnttip2-is-essential-for-18s-rrna-processing-and-digestive-organ-development-in-zebrafish
#19
JOURNAL ARTICLE
Ru Zhou, Wei Cui, Ni Zeng, Baochun Su, Yayue Chen, Hui Shi, Shuyi Zhao
Dnttip2 is one of the components of the small subunit (SSU) processome. In yeast, depletion of dnttip2 leads to an inefficient processing of pre-rRNA and a decrease in synthesis of the mature 18S rRNA. However, the biological roles of Dnttip2 in higher organisms are poorly defined. In this study, we demonstrate that dnttip2 is a maternal gene in zebrafish. Depletion of Dnttip2 leads to embryonic lethal with severe digestive organs hypoplasia. The loss of function of Dnttip2 also leads to partial defects in cleavage at the A0 -site and E-site during 18S rRNA processing...
March 27, 2024: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/38560483/patterns-of-cytogenomic-findings-from-a-case-series-of-recurrent-pregnancy-loss-provide-insight-into-the-extent-of-genetic-defects-causing-miscarriages
#20
JOURNAL ARTICLE
Autumn DiAdamo, Hongyan Chai, Mei Ling Chong, Guilin Wang, Jiadi Wen, Yong-Hui Jiang, Peining Li
Background  A retrospective study was performed to evaluate the patterns of cytogenomic findings detected from a case series of products of conception (POC) in recurrent pregnancy loss (RPL) over a 16-year period from 2007 to 2023. Results  This case series of RPL was divided into a single analysis (SA) group of 266 women and a consecutive analysis (CA) group of 225 women with two to three miscarriages analyzed. Of the 269 POC from the SA group and the 469 POC from the CA group, a spectrum of cytogenomic abnormalities of simple aneuploidies, compound aneuploidies, polyploidies, and structural rearrangements/pathogenic copy number variants (pCNVs) were detected in 109 (41%) and 160 cases (34%), five (2%) and 11 cases (2%), 35 (13%) and 36 cases (8%), and 10 (4%) and 19 cases (4%), respectively...
January 2024: Global medical genetics
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